Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017503_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:5:197734370:197735471:-1 gene:Zm00001d017503 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein INAPERTURATE POLLEN1
Sequence

ATGCCGCGGCCCCCGCCGCCGGGCCGCGGGACCCCAGGCGCAAGGCGGCCGATCCGGGAC
TTCTTCGCCACCTGGCTCGCCACCCTCCGCTCACCGCTCCTCCCGCTGCTCCGCCGCGCG
CTCTCCACCTCCTCCTCGTCCGGCTCCTGGGACGACCCGCTCTCCTCCGCCGCCGCGGCT
GTCGAGGCTCACTTCCAGGCGCACTGGTCCGCGCTCGACGCTGCCGCACGCCAGGACCCA
ACGCGGGTCATCGCCGCGGGGGACTGGCGGTCCCCGCTCGAGCTCCCCTTCCTGTGGCTT
GGGGACGTCCACCCCTCCCTCCTTACCTCGCTCCTCCGCACGCTCTCGCCCTCGCCGCGA
CTCCTCGCTGCCGTCGACCGCGTCGACCGCCGGATCCGCACCGCCGTCCCTGCCGTCTCC
GACCGCCTCCGCCAGGCCCAGGAAGCTTTTGTGGCCGCCGAGGCAACCGGCGCCGCCGAC
GTGGAGGCGTTCTTGGCGGAGCTAAAGGGCGTCGCTCTCGAAGCCAACCGGCTGCGTCGG
GGCGTACTCTCAGACCTCGTCGCCGCCGCTGGGGGGTACCAGGCGGCGCTGTACCTCGAG
GCGCTCTCGCGCTTCGTGTTGTCCATGCACGACCCCGAGGTGCTCCGCCGCTTCGACCAG
TGTCGCGCCTCGCCTCGTAGCTAG

Peptide Sequence

PEP ID

Zm00001d017503_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:5:197734370:197735471:-1 gene:Zm00001d017503 transcript:Zm00001d017503_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein INAPERTURATE POLLEN1
Sequence

MPRPPPPGRGTPGARRPIRDFFATWLATLRSPLLPLLRRALSTSSSSGSWDDPLSSAAAA
VEAHFQAHWSALDAAARQDPTRVIAAGDWRSPLELPFLWLGDVHPSLLTSLLRTLSPSPR
LLAAVDRVDRRIRTAVPAVSDRLRQAQEAFVAAEATGAADVEAFLAELKGVALEANRLRR
GVLSDLVAAAGGYQAALYLEALSRFVLSMHDPEVLRRFDQCRASPRS

Transcript Sequence

Transcript ID

Zm00001d017503_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:197734370:197735471:-1 gene:Zm00001d017503 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein INAPERTURATE POLLEN1
Sequence

AACCGCCGCAATCGGGCCACACCAATCACCGCCGCAACAACAGGCATGCCGCGGCCCCCG
CCGCCGGGCCGCGGGACCCCAGGCGCAAGGCGGCCGATCCGGGACTTCTTCGCCACCTGG
CTCGCCACCCTCCGCTCACCGCTCCTCCCGCTGCTCCGCCGCGCGCTCTCCACCTCCTCC
TCGTCCGGCTCCTGGGACGACCCGCTCTCCTCCGCCGCCGCGGCTGTCGAGGCTCACTTC
CAGGCGCACTGGTCCGCGCTCGACGCTGCCGCACGCCAGGACCCAACGCGGGTCATCGCC
GCGGGGGACTGGCGGTCCCCGCTCGAGCTCCCCTTCCTGTGGCTTGGGGACGTCCACCCC
TCCCTCCTTACCTCGCTCCTCCGCACGCTCTCGCCCTCGCCGCGACTCCTCGCTGCCGTC
GACCGCGTCGACCGCCGGATCCGCACCGCCGTCCCTGCCGTCTCCGACCGCCTCCGCCAG
GCCCAGGAAGCTTTTGTGGCCGCCGAGGCAACCGGCGCCGCCGACGTGGAGGCGTTCTTG
GCGGAGCTAAAGGGCGTCGCTCTCGAAGCCAACCGGCTGCGTCGGGGCGTACTCTCAGAC
CTCGTCGCCGCCGCTGGGGGGTACCAGGCGGCGCTGTACCTCGAGGCGCTCTCGCGCTTC
GTGTTGTCCATGCACGACCCCGAGGTGCTCCGCCGCTTCGACCAGTGTCGCGCCTCGCCT
CGTAGCTAGTTACCCTTCTTGTTCTCAAGGTCCGTGTAAATATTTCAAGAAAATGCCGCA
CCAATATTGAGCAATGGCATCAATAAAGTTCTTGTCTGTATAGCTTAGTGATAGTTTCTG
TACAACCTTATTCTGCAAATGGTTTCCTCAAATCATCGATGAACTGTATGAGAAAATGGT
ACCTAGACCCGTTCAATTTGTGACTAAAATGCTGGTTATGTCACCACTGTTCAATGCCTA
TTTGGATACGCTTTAGCATTCCCAAATTTCAGATAATTTAATATTTTGAGCACT