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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017485_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:197280503:197281892:-1 gene:Zm00001d017485 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tonoplast intrinsic protein2 description: tonoplast intrinsic protein2
Sequence

ATGGTGAAGCTCGCATTCGGAAGCGTCGGCGACTCCTTCAGCGTCACCTCCATCAAGGCC
TACGTGGCGGAGTTCATCGCCACCCTCCTCTTCGTCTTCGCCGGCGTGGGTTCCGCCATC
GCCTTCGGGCAACTGACGAATGGCGGCGCGCTGGACCCTGCGGGACTGGTGGCGATCGCG
GTGGCGCACGCGCTGGCCCTCTTCGTGGGCGTCTCCGTGGCCGCGAACACCTCCGGCGGC
CACCTGAACCCCGCCGTGACGTTCGGCCTGGCCGTGGGCGGCCACATCACCGTCCTCACC
GGCCTCTTCTACTGGGTGGCCCAGCTGCTGGGCGCGTCCGTGGCGTGCCTGCTCCTCAGG
TTCGTGACCCACGGCAAGGCCATCCCGACCCACGGCGTCTCCGGCGGCACCACCGAGCTG
GAGGGCGTCGTGTTCGAGATCGTCATCACCTTCGCGCTCGTCTACACCGTGTACGCCACC
GCCGCCGACCCCAAGAAGGGCTCCCTCGGCACCATCGCGCCCATCGCCATCGGCTTCATC
GTCGGCGCCAACATCCTCGCCGCGGGGCCCTTCAGCGGCGGCTCCATGAACCCCGCCCGC
TCCTTCGGCCCCGCCGTCGCCGCGGCCGACTTCGCCGGCAACTGGGTCTACTGGGTCGGC
CCGCTCATCGGCGGCGGACTCGCTGGCCTCGTCTACGGCGACGTCTTCATCGGCGGCTCC
TACCAGCAGGTCGCCGACCAGGACTACGCCTAA

Peptide Sequence

PEP ID

Zm00001d017485_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:197280503:197281892:-1 gene:Zm00001d017485 transcript:Zm00001d017485_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tonoplast intrinsic protein2 description: tonoplast intrinsic protein2
Sequence

MVKLAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIA
VAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLR
FVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFI
VGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAGLVYGDVFIGGS
YQQVADQDYA

Transcript Sequence

Transcript ID

Zm00001d017485_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:197280503:197281892:-1 gene:Zm00001d017485 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tonoplast intrinsic protein2 description: tonoplast intrinsic protein2
Sequence

AAAAGATGACAATAGCGCAAACAGACATCCGAACAAAGCTTGGTGCGCCTGCTCTCGGCC
GGGCTAGCTAGTACCAATCATGGAATAATAAGCTAGTATATATATACCGCCCCATTTATA
AAAATGTAAATAAAATGTCTGTGGCGATTATGCACACCGTCCATAATACTCTAGTCGTCG
GCAAGCTGAGGCCGCCCATTAAGCCTTGAGCGTGTATAAAAGGGGCATAGACTCCCAGCA
TCAGCGAAGCAGCAACATATCAAGCTCAGAGCCTCAGAGCGCCAGCCAAGTCTTGCGGTC
GCGAAGAGCAACGCAACAAGATGGTGAAGCTCGCATTCGGAAGCGTCGGCGACTCCTTCA
GCGTCACCTCCATCAAGGCCTACGTGGCGGAGTTCATCGCCACCCTCCTCTTCGTCTTCG
CCGGCGTGGGTTCCGCCATCGCCTTCGGGCAACTGACGAATGGCGGCGCGCTGGACCCTG
CGGGACTGGTGGCGATCGCGGTGGCGCACGCGCTGGCCCTCTTCGTGGGCGTCTCCGTGG
CCGCGAACACCTCCGGCGGCCACCTGAACCCCGCCGTGACGTTCGGCCTGGCCGTGGGCG
GCCACATCACCGTCCTCACCGGCCTCTTCTACTGGGTGGCCCAGCTGCTGGGCGCGTCCG
TGGCGTGCCTGCTCCTCAGGTTCGTGACCCACGGCAAGGCCATCCCGACCCACGGCGTCT
CCGGCGGCACCACCGAGCTGGAGGGCGTCGTGTTCGAGATCGTCATCACCTTCGCGCTCG
TCTACACCGTGTACGCCACCGCCGCCGACCCCAAGAAGGGCTCCCTCGGCACCATCGCGC
CCATCGCCATCGGCTTCATCGTCGGCGCCAACATCCTCGCCGCGGGGCCCTTCAGCGGCG
GCTCCATGAACCCCGCCCGCTCCTTCGGCCCCGCCGTCGCCGCGGCCGACTTCGCCGGCA
ACTGGGTCTACTGGGTCGGCCCGCTCATCGGCGGCGGACTCGCTGGCCTCGTCTACGGCG
ACGTCTTCATCGGCGGCTCCTACCAGCAGGTCGCCGACCAGGACTACGCCTAAGTAGTGT
GCTCCGCGCGCGTTTCGATCGGCGTCGTCATTTGCTTTGCTCTTCATTTCATCACGTTAT
GTAACGTGCCAATGATGTGTGTCGTCCTGGTCTGTTCCATTCCGTCCTTGTATTCATTTC
CCTTCTTTTTTCGGGGTAAAATCGATGTAAAGATCTCATCCGATCT