Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017469_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:196842404:196845708:1 gene:Zm00001d017469 gene_biotype:protein_coding transcript_biotype:protein_coding description:nucleolar essential protein-related
Sequence

ATGGGGCGGCCTTACGCGGTGAAGGGGCGGAAGAAGAAGCGCAAGCTCGAGGAGGCGGCG
GCGGCCTCGGACGCTGCCCCGCCCGTCGAAGAAGCGGAGGAGCTGCCACCGCCAGAGGTG
AGAAGCGGCGAGGAAAAGAGCAGCGAGGAGGATGAGGCAGCAGCGGGGGAGGAGGAGCAC
GCGGCGGCGGACGGGCTCCCAATCCTACCCAGGACGGTTGATGGGAAGCGGCGACCCGGC
GCCATCTTCGTACTCGAGAGGGCCTGCCTCGAGGTCGGCAAAGTCGGCAAGACTATGCAA
ATTTTGAACTCTGATGATCATGCGAATTATTTGAGGAAGCAGAATCGCAATCCTGCAGAT
TATAGGCCTGATATCATTCATCAGGCTGTTTATGTGAGAACTGAAAAGGGCGTATTGTTT
GAAATCAAACCTCATGTCCGCATGCCAAGAACCTTTAAACGTTTCTGTGGTTTAATGTCA
CAATTGTTGCAAAAACTGAGCATTACGGCAGTTGGAAAGCGTGAGAAGCTTCTCAACGTT
GTTAAAAATCCTGTCACTCGTTATCTACCTGTTGGTGCACGTAAGATTGGCCTTTCATTT
AGTGCTGAGAAGTCAGTCAACTTGTTTGACTATGTTGCCAAATCCAATGACGACGAACCT
CTTGTGTTTGTGGTTGGTGCCATGGCCCATGGAAAGATCGACAAGGAATATACAGATGAT
TACATACAAATTTGCAACTACCCTCTCAGTGCTGCCTGCTGTTTAAATCGGATATGCAGT
GCCCTGGAGCAGAAGTGGAACATCCAATGA

Peptide Sequence

PEP ID

Zm00001d017469_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:196842404:196845708:1 gene:Zm00001d017469 transcript:Zm00001d017469_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:nucleolar essential protein-related
Sequence

MGRPYAVKGRKKKRKLEEAAAASDAAPPVEEAEELPPPEVRSGEEKSSEEDEAAAGEEEH
AAADGLPILPRTVDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPAD
YRPDIIHQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQLLQKLSITAVGKREKLLNV
VKNPVTRYLPVGARKIGLSFSAEKSVNLFDYVAKSNDDEPLVFVVGAMAHGKIDKEYTDD
YIQICNYPLSAACCLNRICSALEQKWNIQ

Transcript Sequence

Transcript ID

Zm00001d017469_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:196842404:196845708:1 gene:Zm00001d017469 gene_biotype:protein_coding transcript_biotype:protein_coding description:nucleolar essential protein-related
Sequence

GAACGCTAGCTGAACCCTAGCCGGCGGATCTCCGCGGGCGGCAGTCAGGAGTGGAGGCGT
GGTCGCACGGGCGAGGTCGCAATAGGAGAGGCTCAGAGAGATGGGGCGGCCTTACGCGGT
GAAGGGGCGGAAGAAGAAGCGCAAGCTCGAGGAGGCGGCGGCGGCCTCGGACGCTGCCCC
GCCCGTCGAAGAAGCGGAGGAGCTGCCACCGCCAGAGGTGAGAAGCGGCGAGGAAAAGAG
CAGCGAGGAGGATGAGGCAGCAGCGGGGGAGGAGGAGCACGCGGCGGCGGACGGGCTCCC
AATCCTACCCAGGACGGTTGATGGGAAGCGGCGACCCGGCGCCATCTTCGTACTCGAGAG
GGCCTGCCTCGAGGTCGGCAAAGTCGGCAAGACTATGCAAATTTTGAACTCTGATGATCA
TGCGAATTATTTGAGGAAGCAGAATCGCAATCCTGCAGATTATAGGCCTGATATCATTCA
TCAGGCTGTTTATGTGAGAACTGAAAAGGGCGTATTGTTTGAAATCAAACCTCATGTCCG
CATGCCAAGAACCTTTAAACGTTTCTGTGGTTTAATGTCACAATTGTTGCAAAAACTGAG
CATTACGGCAGTTGGAAAGCGTGAGAAGCTTCTCAACGTTGTTAAAAATCCTGTCACTCG
TTATCTACCTGTTGGTGCACGTAAGATTGGCCTTTCATTTAGTGCTGAGAAGTCAGTCAA
CTTGTTTGACTATGTTGCCAAATCCAATGACGACGAACCTCTTGTGTTTGTGGTTGGTGC
CATGGCCCATGGAAAGATCGACAAGGAATATACAGATGATTACATACAAATTTGCAACTA
CCCTCTCAGTGCTGCCTGCTGTTTAAATCGGATATGCAGTGCCCTGGAGCAGAAGTGGAA
CATCCAATGAGGAACTTTTGACAAGCATGGGAATCTTGTTTTATTATATACATCTTACAT
GTACTTCCCTCTGCTTATGTACAATGTTTGAAAGTTAAAACCAAATGTTTCAGTGTGGCA
TTATGACGTGTTTTAGACATCAATTCATGGCTTTAAACTGGTTTGT