Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017459_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:5:196472504:196475454:1 gene:Zm00001d017459 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTCGGCCTCCGGCGCCTCCCCGCTGTCTCCGGCCGCCTCGCGCCGGAGGTCACCTCC
GTCTCTGCGGCCTCCTCCCACAGCGCCGTCTTCTTTCGCACCCTCCAAATCCTCGTCCAG
CAGGGGCCCGTCCGCCTCCAAAAGCTCTCTGCTCCGGACACCGGGATCGTGGAGCTGAGG
CTGGAGCGGCCGGAGGCCAAGAATGCCATAGGGAAGGAGATGCTCCAGGGGCTGCGGAGC
GCGATCCAGGAGGTGGAGGCCGACACGGCTGCAAACGTCGTCTTGGTGACGAGCTCGGTG
CCCAAGGTTTTCTGCGCGGGCGCTGATCTCAAGGAAAGGAGGTTGATGGGTCCTAGTGAA
GTTCGGGACTTCGTTAATTCCTTAAGGTCTACATTTTCATCCTTTGAGGCACTGTCTATT
CCTACAATTGCTGTTGTCGAAGGGGTTGCTTTTGGTGGCGGGTTAGAATTGGCTCTGTCA
TGTGATCTTCGCATATGTGGCAAGGATGCAAAATTCAGTTTGCCAGAGACTGGCCTTGCT
ATTATCCCAGGTGCTGGAGGAACACAGCGCCTTCCTAGGATTGTTGGAAGGTCAAGAGCA
AAAGAACTAATATTCACTGGTCGTAGATTCGATGCGGTGGAGGCTGTAACTATGGGAGTA
GTAAACTACTGTGTTCCTGCCGGCGACGCTTATCAAAAGGCTCTTGAACTTGCGCGGGAG
ATAAACCAGAAAGGCCCGTTAGCAGTAAAAATGGCTAAGAAGGCCATCGATCAAGGGGCA
GAGGTAGACTTGCCCTCAGCATTGGCCGTTGAAGAAGAATGCTACCAGCAAGTCCTGCAC
ACTGAGGATCGTCTTGAGGGTCTAGCCGCATTCGCCGAGAAAAGAAAGCCTATATATAAA
GGGAAGTAG

Peptide Sequence

PEP ID

Zm00001d017459_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:5:196472504:196475454:1 gene:Zm00001d017459 transcript:Zm00001d017459_T004 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLGLRRLPAVSGRLAPEVTSVSAASSHSAVFFRTLQILVQQGPVRLQKLSAPDTGIVELR
LERPEAKNAIGKEMLQGLRSAIQEVEADTAANVVLVTSSVPKVFCAGADLKERRLMGPSE
VRDFVNSLRSTFSSFEALSIPTIAVVEGVAFGGGLELALSCDLRICGKDAKFSLPETGLA
IIPGAGGTQRLPRIVGRSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGDAYQKALELARE
INQKGPLAVKMAKKAIDQGAEVDLPSALAVEEECYQQVLHTEDRLEGLAAFAEKRKPIYK
GK

Transcript Sequence

Transcript ID

Zm00001d017459_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:196472504:196475454:1 gene:Zm00001d017459 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGCTGCTCCAGTTCCAGCTCTCCCAACACCAACATGCTCGGCCTCCGGCGCCTCCCCGC
TGTCTCCGGCCGCCTCGCGCCGGAGGTCACCTCCGTCTCTGCGGCCTCCTCCCACAGCGC
CGTCTTCTTTCGCACCCTCCAAATCCTCGTCCAGCAGGGGCCCGTCCGCCTCCAAAAGCT
CTCTGCTCCGGACACCGGGATCGTGGAGCTGAGGCTGGAGCGGCCGGAGGCCAAGAATGC
CATAGGGAAGGAGATGCTCCAGGGGCTGCGGAGCGCGATCCAGGAGGTGGAGGCCGACAC
GGCTGCAAACGTCGTCTTGGTGACGAGCTCGGTGCCCAAGGTTTTCTGCGCGGGCGCTGA
TCTCAAGGAAAGGAGGTTGATGGGTCCTAGTGAAGTTCGGGACTTCGTTAATTCCTTAAG
GTCTACATTTTCATCCTTTGAGGCACTGTCTATTCCTACAATTGCTGTTGTCGAAGGGGT
TGCTTTTGGTGGCGGGTTAGAATTGGCTCTGTCATGTGATCTTCGCATATGTGGCAAGGA
TGCAAAATTCAGTTTGCCAGAGACTGGCCTTGCTATTATCCCAGGTGCTGGAGGAACACA
GCGCCTTCCTAGGATTGTTGGAAGGTCAAGAGCAAAAGAACTAATATTCACTGGTCGTAG
ATTCGATGCGGTGGAGGCTGTAACTATGGGAGTAGTAAACTACTGTGTTCCTGCCGGCGA
CGCTTATCAAAAGGCTCTTGAACTTGCGCGGGAGATAAACCAGAAAGGCCCGTTAGCAGT
AAAAATGGCTAAGAAGGCCATCGATCAAGGGGCAGAGGTAGACTTGCCCTCAGCATTGGC
CGTTGAAGAAGAATGCTACCAGCAAGTCCTGCACACTGAGGATCGTCTTGAGGGTCTAGC
CGCATTCGCCGAGAAAAGAAAGCCTATATATAAAGGGAAGTAGGGCCGTGTATGGTCTTA
GATTCATAATAATAGAAAGTCGCATTAACATGCCATCCAATAATAGTGGCATGATTGCAT
GACATTGATATGTGCAAATTCATGTCTCTCTGTAACTTTCAGGAAATAAGATAAGATGTA
TCAGCGCTGCTACCTATGTGTTCTGAACGAGGTGAATTTGGCTGCGGCTTTAGACTTAAG
ATAGACAGATT