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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017432_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:195844968:195847238:-1 gene:Zm00001d017432 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:U6 biogenesis like1 description: U6 biogenesis like1
Sequence

ATGGACGCGCTCATGGCGAGCTACGCGTCCGACACCGACTCTGACGGCGGCGAGTCTGCT
TCCGTCTCTGGAGGCGCCCCGGAGGTCCCGGAACCTTCGGCCTTGCTCCCACCTCCTCCC
CTCGACCTCCTCCAGCCCCCCAACTTCGTAGATTACTCGGCGATGGCGCAGGGGGGTCGC
GTCCGGAGCTTCCCCCATGTGGAAGGCAACTATGCTGTACATGTTTATATCCCTGTCGTC
ATACCTTCTGATGCAAGGAAACAACTGGCTCTTTCTATGAAAAGAGCTGCATCTCTTGTG
CCGGATCTCTATGCCGTTGATGCAGACTATGCGCTTTCTGAATTGTGCAAAGATGAACAG
AAGCTTGAGAAAGTGCTTCTGAGCAGGGAGTTTCATGTAAGCTTGGGAAGACCTGTTGCA
GTTCAGGTGCATCAGATTGACTCATTTATTGCAATGCTTCGCCAGAAGTTCCAGCCACAA
CAACAGTTAGTCATCTCTAAGAACTTCACTGCTTGGTACTGGATGGAGTTCAATAAATGG
GAGCACTTTGTCAATGATGATTGTACACGGTCATTTGTTTCACTAGAAGTTACAAGAACT
GGTTTGCCAGAGATAACGAGGCAGATACTTATGGTAGATGAAGTGTATCGATTGCATGGT
CTTCCTGAATTTTACACGAATCCACGGCCACATATATCGTTGGTGTGGGCATTGGGTGAT
GTCAGCGGCAAACTAAAGCAGGCACTAAAGGACATTGAAAAATATCAGAGCAGTATGAGC
TCATTGCAAAAATGTAATGTTCGATGCAAGTTCAGTCGTGTAGTTTGTAAAGTAGGCAAG
AAGGTGCATGATATCTGTAAAGTTGCAGATTGA

Peptide Sequence

PEP ID

Zm00001d017432_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:195844968:195847238:-1 gene:Zm00001d017432 transcript:Zm00001d017432_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:U6 biogenesis like1 description: U6 biogenesis like1
Sequence

MDALMASYASDTDSDGGESASVSGGAPEVPEPSALLPPPPLDLLQPPNFVDYSAMAQGGR
VRSFPHVEGNYAVHVYIPVVIPSDARKQLALSMKRAASLVPDLYAVDADYALSELCKDEQ
KLEKVLLSREFHVSLGRPVAVQVHQIDSFIAMLRQKFQPQQQLVISKNFTAWYWMEFNKW
EHFVNDDCTRSFVSLEVTRTGLPEITRQILMVDEVYRLHGLPEFYTNPRPHISLVWALGD
VSGKLKQALKDIEKYQSSMSSLQKCNVRCKFSRVVCKVGKKVHDICKVAD

Transcript Sequence

Transcript ID

Zm00001d017432_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:195844968:195847238:-1 gene:Zm00001d017432 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:U6 biogenesis like1 description: U6 biogenesis like1
Sequence

ATGACCACTGTGCCGACACCCTACGTCCAGCACCACTCTCCACGCCAGCGCCGCTACTCT
CCGCCTGCGCCCCCGTGCCTCCCACCGGGCCACTTCGCTAGCGCCGCCCGCTGCAGCACT
AGCCGTCGAGCGCGGCGCTCGCCGCCGACTTCTCACGCGGCCGCGTCGTCGACCCACGTC
CCCACCGGCTGGGGTTCAACGGGAGAAGGAACCGATGGACGCGCTCATGGCGAGCTACGC
GTCCGACACCGACTCTGACGGCGGCGAGTCTGCTTCCGTCTCTGGAGGCGCCCCGGAGGT
CCCGGAACCTTCGGCCTTGCTCCCACCTCCTCCCCTCGACCTCCTCCAGCCCCCCAACTT
CGTAGATTACTCGGCGATGGCGCAGGGGGGTCGCGTCCGGAGCTTCCCCCATGTGGAAGG
CAACTATGCTGTACATGTTTATATCCCTGTCGTCATACCTTCTGATGCAAGGAAACAACT
GGCTCTTTCTATGAAAAGAGCTGCATCTCTTGTGCCGGATCTCTATGCCGTTGATGCAGA
CTATGCGCTTTCTGAATTGTGCAAAGATGAACAGAAGCTTGAGAAAGTGCTTCTGAGCAG
GGAGTTTCATGTAAGCTTGGGAAGACCTGTTGCAGTTCAGGTGCATCAGATTGACTCATT
TATTGCAATGCTTCGCCAGAAGTTCCAGCCACAACAACAGTTAGTCATCTCTAAGAACTT
CACTGCTTGGTACTGGATGGAGTTCAATAAATGGGAGCACTTTGTCAATGATGATTGTAC
ACGGTCATTTGTTTCACTAGAAGTTACAAGAACTGGTTTGCCAGAGATAACGAGGCAGAT
ACTTATGGTAGATGAAGTGTATCGATTGCATGGTCTTCCTGAATTTTACACGAATCCACG
GCCACATATATCGTTGGTGTGGGCATTGGGTGATGTCAGCGGCAAACTAAAGCAGGCACT
AAAGGACATTGAAAAATATCAGAGCAGTATGAGCTCATTGCAAAAATGTAATGTTCGATG
CAAGTTCAGTCGTGTAGTTTGTAAAGTAGGCAAGAAGGTGCATGATATCTGTAAAGTTGC
AGATTGAAACACACATGAATTACGCTCGATAAGCTTCGAGGTA