Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017424_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:5:195714396:195720999:1 gene:Zm00001d017424 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 7 chloroplastic
Sequence	ATGGGCTTCCTCCTGCTCCAGCTGGGCTTCGCCATATTTGCGCTACGCATGCTTCGCCCA GAGATCGCGTTGCCCGGTTCAGAGCCCCGCCCACAGACGACGTACGTCAGTGTACCATAC AGCGACTTCCTGGCCAGCATAAACAAGGACCAGGTGAAGAAGGTTGAGGTGGACGGGGTG CATATCATGTTCCGACTCCGCCCAGAGGTGGAGTCCCAGGTCCGTGTTGAGCAGACACCG ACACAGCGCGGAGCAGATTATGTCATTGATAATGCTGGAGTTTCAAGGAGAATTGTGTTC ACGACGACTCGTCCAGTGGACATAAAGACACCATACGAGAAGATGGTGGAAAACATGGTT GAATTTGGGTCACCGGACAAGAGGTCTGGCGGCATGCTCAATTCTGCCCTGGTAGGTCTT ATCTATGTTGTATTGATTGCGGTAGTTTTGCAGCGCCTGCCAATAAGCTTTTCTCAGCAA TCACCCGGTCAGTTGAGGAATAGGAAGAATTCTAATTCCGGCGGAGCAAAAGTTTCTGAA AGTTCGGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTT GAAGAAATTGTGGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCT CCTCGTGGTGTCTTATTGGTGGGTCTTCCAGGGACTGGAAAGACACTTCTTGCAAAAGCC GTAGCAGGAGAAGCAGAAGTCCCATTCATAAGTTGCTCTGCTAGTGAATTTGTTGAGCTA TATGTAGGCATGGGAGCAGCTCGAGTACGTGACCTATTTGCTAAGGCCAAAAAGGAATCG CCATCGATTATTTTTATCGATGAGATTGATGCCGTTGCAAAAAGCCGTGATAGTCGATAT CGCATTGTCAGTAATGATGAACGTGAGCAGACATTAAACCAATTGCTCACGGAAATGGAT GGCTTTGATACCAACTCGGCTGTCATTGTATTGGGGGCAACAAATCGAGCTGATGTTTTG GATCCTGCCCTTAGGCGCCCTGGGAGATTTGACCGTGTGGTTATGGTTGAAGCTCCTGAT AGGTTTGGAAGAGAATCAATTCTAAAAGTTCATGTGAAAAGAAGAGAGCTTCCACTGAGT AAAGATGTAGATCTAGCCAATATTGCTGCAATGACAACTGGTTTTACTGGAGCAGACCTT GCAAACTTGGTAAACGAAGCTGCTCTGTTGGCTGGGCGATTAAATAAAGAAATAGTGGAA AAGGTTGACTTCATCCGTGCGGTTGAGCGATCTATAGCAGGGATAGAGAAAAAGCATGCA AAATTGAAGGGTAATGAAAAAGCTGTTGTTGCGCGGCATGAAGTAGGTCATGCACTCGTG GGAACTGCTGTAGCAAACCTCCTTCCTGGACAGCCACGTGTGGAGAAATTGAGTATATTG CCAAGATCTGGAGGTGCATTAGGCTTCACGTACACCCCTCCCGTCACAGAGGATAGATAT TTACTCTTTGTTGATGAACTACGTGGCCGTTTAGTAACACTACTGGGTGGGAGGGCAGCA GAGGAAGTTGTTTTAGCAGGACGGGTTTCGACTGGTGCACTTGATGACATAAGACGTGCT ACTGACATGGCCTACAAAGCTGTAGCAGAATACGGTCTTAGTCAGCGCATCGGGCCAATA TCACTTGCTACACTGTCAAATGGTGGTTTAGATGACTCTGGTGGCTCTCCATGGGGAAAG GACCAGGGACATCTAGTTGATCTCGTTCAGAGGGAAGTAAAAGCGCTTTTACAGTCGTCA CTGGAAGTAGCTCTTTCAGTTATTCGTGCTAATCCTGCAGTTTTGGAAGGCCTCGGAGCA TACTTAGAAGAGAAAGAAAAGGTTGAAGGCGAGGAGCTTCAAGAGTGGCTAAAATCGGTT GTTGCATCAAAAGAGTTGACCTCTTTTATCAGAGGACAGCAAGAGCAAGTTCTTCAGCTG GAAGCAGGCTCCTAG

Peptide Sequence

PEP ID	Zm00001d017424_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:5:195714396:195720999:1 gene:Zm00001d017424 transcript:Zm00001d017424_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 7 chloroplastic
Sequence	MGFLLLQLGFAIFALRMLRPEIALPGSEPRPQTTYVSVPYSDFLASINKDQVKKVEVDGV HIMFRLRPEVESQVRVEQTPTQRGADYVIDNAGVSRRIVFTTTRPVDIKTPYEKMVENMV EFGSPDKRSGGMLNSALVGLIYVVLIAVVLQRLPISFSQQSPGQLRNRKNSNSGGAKVSE SSDIVTFADVAGVDEAKEELEEIVEFLRNPERYIRLGARPPRGVLLVGLPGTGKTLLAKA VAGEAEVPFISCSASEFVELYVGMGAARVRDLFAKAKKESPSIIFIDEIDAVAKSRDSRY RIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPD RFGRESILKVHVKRRELPLSKDVDLANIAAMTTGFTGADLANLVNEAALLAGRLNKEIVE KVDFIRAVERSIAGIEKKHAKLKGNEKAVVARHEVGHALVGTAVANLLPGQPRVEKLSIL PRSGGALGFTYTPPVTEDRYLLFVDELRGRLVTLLGGRAAEEVVLAGRVSTGALDDIRRA TDMAYKAVAEYGLSQRIGPISLATLSNGGLDDSGGSPWGKDQGHLVDLVQREVKALLQSS LEVALSVIRANPAVLEGLGAYLEEKEKVEGEELQEWLKSVVASKELTSFIRGQQEQVLQL EAGS

Transcript Sequence

Transcript ID	Zm00001d017424_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:195714396:195720999:1 gene:Zm00001d017424 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 7 chloroplastic
Sequence	CGACCGCGACGCGGCTGCGGAGTCGGGGGGCGATAGCACCAGAACGAAAATAAGTGGCGG CGGAGGCTGACTAAGGGAGGCGGCGTGGGGCGGTGGCTATGGGAGCCCATAGTCCAGGGA CGGGAGATGGGCTTCCTCCTGCTCCAGCTGGGCTTCGCCATATTTGCGCTACGCATGCTT CGCCCAGAGATCGCGTTGCCCGGTTCAGAGCCCCGCCCACAGACGACGTACGTCAGTGTA CCATACAGCGACTTCCTGGCCAGCATAAACAAGGACCAGGTGAAGAAGGTTGAGGTGGAC GGGGTGCATATCATGTTCCGACTCCGCCCAGAGGTGGAGTCCCAGGTCCGTGTTGAGCAG ACACCGACACAGCGCGGAGCAGATTATGTCATTGATAATGCTGGAGTTTCAAGGAGAATT GTGTTCACGACGACTCGTCCAGTGGACATAAAGACACCATACGAGAAGATGGTGGAAAAC ATGGTTGAATTTGGGTCACCGGACAAGAGGTCTGGCGGCATGCTCAATTCTGCCCTGGTA GGTCTTATCTATGTTGTATTGATTGCGGTAGTTTTGCAGCGCCTGCCAATAAGCTTTTCT CAGCAATCACCCGGTCAGTTGAGGAATAGGAAGAATTCTAATTCCGGCGGAGCAAAAGTT TCTGAAAGTTCGGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAA GAGCTTGAAGAAATTGTGGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCT CGCCCTCCTCGTGGTGTCTTATTGGTGGGTCTTCCAGGGACTGGAAAGACACTTCTTGCA AAAGCCGTAGCAGGAGAAGCAGAAGTCCCATTCATAAGTTGCTCTGCTAGTGAATTTGTT GAGCTATATGTAGGCATGGGAGCAGCTCGAGTACGTGACCTATTTGCTAAGGCCAAAAAG GAATCGCCATCGATTATTTTTATCGATGAGATTGATGCCGTTGCAAAAAGCCGTGATAGT CGATATCGCATTGTCAGTAATGATGAACGTGAGCAGACATTAAACCAATTGCTCACGGAA ATGGATGGCTTTGATACCAACTCGGCTGTCATTGTATTGGGGGCAACAAATCGAGCTGAT GTTTTGGATCCTGCCCTTAGGCGCCCTGGGAGATTTGACCGTGTGGTTATGGTTGAAGCT CCTGATAGGTTTGGAAGAGAATCAATTCTAAAAGTTCATGTGAAAAGAAGAGAGCTTCCA CTGAGTAAAGATGTAGATCTAGCCAATATTGCTGCAATGACAACTGGTTTTACTGGAGCA GACCTTGCAAACTTGGTAAACGAAGCTGCTCTGTTGGCTGGGCGATTAAATAAAGAAATA GTGGAAAAGGTTGACTTCATCCGTGCGGTTGAGCGATCTATAGCAGGGATAGAGAAAAAG CATGCAAAATTGAAGGGTAATGAAAAAGCTGTTGTTGCGCGGCATGAAGTAGGTCATGCA CTCGTGGGAACTGCTGTAGCAAACCTCCTTCCTGGACAGCCACGTGTGGAGAAATTGAGT ATATTGCCAAGATCTGGAGGTGCATTAGGCTTCACGTACACCCCTCCCGTCACAGAGGAT AGATATTTACTCTTTGTTGATGAACTACGTGGCCGTTTAGTAACACTACTGGGTGGGAGG GCAGCAGAGGAAGTTGTTTTAGCAGGACGGGTTTCGACTGGTGCACTTGATGACATAAGA CGTGCTACTGACATGGCCTACAAAGCTGTAGCAGAATACGGTCTTAGTCAGCGCATCGGG CCAATATCACTTGCTACACTGTCAAATGGTGGTTTAGATGACTCTGGTGGCTCTCCATGG GGAAAGGACCAGGGACATCTAGTTGATCTCGTTCAGAGGGAAGTAAAAGCGCTTTTACAG TCGTCACTGGAAGTAGCTCTTTCAGTTATTCGTGCTAATCCTGCAGTTTTGGAAGGCCTC GGAGCATACTTAGAAGAGAAAGAAAAGGTTGAAGGCGAGGAGCTTCAAGAGTGGCTAAAA TCGGTTGTTGCATCAAAAGAGTTGACCTCTTTTATCAGAGGACAGCAAGAGCAAGTTCTT CAGCTGGAAGCAGGCTCCTAGCGTCAGGAGTATGCACCGGGCTCTTAAAATTAATTACTT AACAAAAGTGACTCAGCAATTAGAACATACAATATGAGACACAAGGTATGCAATGGAAAC CTTCATATACTGGGAAGAGACCTGTGGCCATGTGTGGTGGGTTGTATGAACCCCCACCCA TTCATGCTAAGACAAACCGGGTCTGGCCCACCCTTTGTTCGGTGAATCATGAGATCGAGC CCTATACGAGAATTCAGGAAAAAAAAAGAAAATCTACATGCCCGAGTGACCATGTAAATA TCTATCATTGCAGTTCCTGAACCCTTGACTACAAAAAAAGAAATCCAGAGATGATTCATA TTGAGCTGTAACATTGTACGATCAACCTCAGGAATATTGTAAGTGATTCAGCTTCACATG TTGTTCCATAGATTAGGTCGGTGTTACACATGTAAAAGATTCTTTTTTGGCAATATATTC TTGTACTCACCCTATTGGAAGTTGTTTTCCTCTATATACCATCCTAGAAATGATCAATAG GATAATGCTTATACGGAC