Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017423_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:195641813:195645583:-1 gene:Zm00001d017423 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:origin recognition complex2 description:Origin recognition complex subunit 2

Sequence

ATGGCCCCGAGAGGCGGCCGCGAGGAGGCTAGTTCTGGCTCCGAGGATGAGGAAGAGGAG
GCCGGTTTCTCCAGGAGCTACTTCCTGGCCAAGGAGAAGGAGCCGTCATCCGTGAAGAAG
CGCGCCCGCGCCGCCGCAGGCAAGCTCTCCGACCTCAATCTCGTCGACGAGCAGGTGTTG
CGTGCATCCCTTGCACAGATCCCCCCGAAGCACAAGGAAGAGGTGGAGTCCCTGACGAGA
AGCTACAAGGACCAGTACCGCAACTGGCTGTTCGAACTAAGATGCGGTTTTGGTCTCCTG
ATGTATGGGTTTGGATCTAAGAAGCAGTTGCTCGAGGATTTTGCCTCCACCACCTTGACT
AATTTCACTGTCGTTGTAATCAATGGCTACCTTCCGGCCGTCAATTTGAAACAGGTCATA
GCAACAATAGCTGAAATGTTCTGGGATCAAACAAAAGCTAAACGCAGGAAACGTGCAGGA
ACAAGGTCCCAGTTGTCACAGCAGTTTCCGTCACAATCAACAGAGGGTATCATCTCATTC
CTAATGAGACAGACATCTGACGATGTGGATGATCACGTGTGCCTTCTTATTCATAATATT
GACGGGCCTGCTTTGCGTGATACTGAATCACAACAATGTCTAGCACAAATTTCTTGCTGC
CCACAAATCCGTGTCGTTGCATCAATAGACCATGTTAATGCCCCTTTATTGTGGGACAAG
AAGATGGTGCACAAACAGTTCAAGTGGAGCTGGTACCATGTCCCGACATTCGCACCTTAC
AAAGTCGAAGGCGTGTTCTACCCATTGATCCTTGCTAGTGGTGGTCACGCCCAAACCACA
AAAACTGCTCTTGTTGTTCTGCAGAGTCTGACACCGAATGCACAAAGCGTTTTCAGAGTC
CTTGCTGAGTATCAGTTGGCAAATGAGAAGGAGGAAGGTATGCCGGTCAGCAGTTTGTAT
ACAAAATGCCGTGAGCGCTTTCTGGTAAGCAGCCAAGTGACATTGAATGCACACCTGACG
GAGTTTAAAGATCACGATCTGGTTAAGACCAGGAAGCACTCTGATGGGCAAGATTGCCTC
CGCATTCCTCTTGTTTCTGACGCGCTGGAGAAGTTGCTGCAAGAATTGGCTTGA

Peptide Sequence

PEP ID

Zm00001d017423_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:195641813:195645583:-1 gene:Zm00001d017423 transcript:Zm00001d017423_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:origin recognition complex2 description:Origin recognition complex subunit 2

Sequence

MAPRGGREEASSGSEDEEEEAGFSRSYFLAKEKEPSSVKKRARAAAGKLSDLNLVDEQVL
RASLAQIPPKHKEEVESLTRSYKDQYRNWLFELRCGFGLLMYGFGSKKQLLEDFASTTLT
NFTVVVINGYLPAVNLKQVIATIAEMFWDQTKAKRRKRAGTRSQLSQQFPSQSTEGIISF
LMRQTSDDVDDHVCLLIHNIDGPALRDTESQQCLAQISCCPQIRVVASIDHVNAPLLWDK
KMVHKQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTTKTALVVLQSLTPNAQSVFRV
LAEYQLANEKEEGMPVSSLYTKCRERFLVSSQVTLNAHLTEFKDHDLVKTRKHSDGQDCL
RIPLVSDALEKLLQELA

Transcript Sequence

Transcript ID

Zm00001d017423_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:195641813:195645583:-1 gene:Zm00001d017423 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:origin recognition complex2 description:Origin recognition complex subunit 2

Sequence

ATAACAACCGCGAGGGAAACAACAGATCCCGCTCCCGCCTCTCCGTTCTACTACTACTCC
TTTCCGGCGGACCGGCGGCGGAACCGCCTAAGCAAAACGGATGGCCCCGAGAGGCGGCCG
CGAGGAGGCTAGTTCTGGCTCCGAGGATGAGGAAGAGGAGGCCGGTTTCTCCAGGAGCTA
CTTCCTGGCCAAGGAGAAGGAGCCGTCATCCGTGAAGAAGCGCGCCCGCGCCGCCGCAGG
CAAGCTCTCCGACCTCAATCTCGTCGACGAGCAGGTGTTGCGTGCATCCCTTGCACAGAT
CCCCCCGAAGCACAAGGAAGAGGTGGAGTCCCTGACGAGAAGCTACAAGGACCAGTACCG
CAACTGGCTGTTCGAACTAAGATGCGGTTTTGGTCTCCTGATGTATGGGTTTGGATCTAA
GAAGCAGTTGCTCGAGGATTTTGCCTCCACCACCTTGACTAATTTCACTGTCGTTGTAAT
CAATGGCTACCTTCCGGCCGTCAATTTGAAACAGGTCATAGCAACAATAGCTGAAATGTT
CTGGGATCAAACAAAAGCTAAACGCAGGAAACGTGCAGGAACAAGGTCCCAGTTGTCACA
GCAGTTTCCGTCACAATCAACAGAGGGTATCATCTCATTCCTAATGAGACAGACATCTGA
CGATGTGGATGATCACGTGTGCCTTCTTATTCATAATATTGACGGGCCTGCTTTGCGTGA
TACTGAATCACAACAATGTCTAGCACAAATTTCTTGCTGCCCACAAATCCGTGTCGTTGC
ATCAATAGACCATGTTAATGCCCCTTTATTGTGGGACAAGAAGATGGTGCACAAACAGTT
CAAGTGGAGCTGGTACCATGTCCCGACATTCGCACCTTACAAAGTCGAAGGCGTGTTCTA
CCCATTGATCCTTGCTAGTGGTGGTCACGCCCAAACCACAAAAACTGCTCTTGTTGTTCT
GCAGAGTCTGACACCGAATGCACAAAGCGTTTTCAGAGTCCTTGCTGAGTATCAGTTGGC
AAATGAGAAGGAGGAAGGTATGCCGGTCAGCAGTTTGTATACAAAATGCCGTGAGCGCTT
TCTGGTAAGCAGCCAAGTGACATTGAATGCACACCTGACGGAGTTTAAAGATCACGATCT
GGTTAAGACCAGGAAGCACTCTGATGGGCAAGATTGCCTCCGCATTCCTCTTGTTTCTGA
CGCGCTGGAGAAGTTGCTGCAAGAATTGGCTTGACATTTTGCATTAGCGCATTTATTTTT
CATGGATGATGGATGGGTTCACTGAAGTATTTGTAGTTTTCTCTGCCCACGTGGAACTGA
AGGATCTTGTCCTTATTGAAGGAAAATGTATTACCATGGAAAGAACTCAGATGAGCATGC
CATTGCATGGATTATTTATAACTCGGATTCCGGAACTGAAA