Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017416_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:195354933:195356837:-1 gene:Zm00001d017416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGGGTTCACGAGTTTCGGGGCCCTACATGGATTCTTCGCCTCCGCCTCCGCCTCGTCCG CCATCGCCGCCGCGACACCCTCCTCACCCTCAGGGCGAGCGTCACGGCGGCTGGGAGATG CCGTACCAGGACGTGGACCACAAGCTCCGCGCGCTGGTCGGAGGCGCCGAGGGCTTCGGC CGCCACGCCATCGGGGGCCTCTACGGAGCCATCCACCGCGTCACGTCGCTCCAAGACAAC GGGCCCGGGAGTCTGAGGGAGGCGTGCCACGCGGAGGAGCCCCTGTGGATCGTCTTCGAG GTGTCCGGCACCATCCACCTCCACTCCTACCTCCGTGTCTCCTCGTACAAGACCATCGAC GGGCGTGGCCAGCGCGTGGTGCTCACCGGCAAGGGGCTCCAGCTCAAGTCATGCCATCAC GTCATCATCTGCAACCTGGTGTTCGAAGGAGGCCGCGGGCACGACGTGGATGGCATCCAG GTCAAGCCCGACTCCACCAACATCTGGATTGACCGCTGCACCCTCGCCGACTACGATGAC GGCCTCATCGACATCACGCGCCAGAGCACAGACATCACAGTCTCAAGATGCCATTTTATG CGGCACGACAAGACGATGCTCATCGGTGCCGACCCCACGCACGTCGGCGACCGCTGCATC AGGGTCACCATCCACCATTGCTTCTTCGACGACACGCGGCAGAGGCACCCCCGCCTCCGC TTCGGAAAGGTTCACCTCTACAACAACTACACGCGCAGCTGGGGCATCTACGCCGTCTGC GCAGGCGTAGAGGCCCAGATCGTGTCCCAGTGCAACATCTACGAGGCAGGTGGAGGGCCC CCAAAGAAGACAACTGTATTCAAGTACATGCCGGAGAAGGCCGGCGACCAAGAGGACGTG GTGGCAGGGTCGATCAGCTCGGAAGGGGACGCCTTCCTCAATGGCGCGCTGCCCTGCCTG ATCGATAACCCTGGGTCTGTCTTCAGGCCAGAGGACTACTACCAGCAGCGGACCATGGAG CCAGCGTCGCCGGCGCTCAAGGACATAATACAGCTCTGCGCAGGATGGCAGTCGGTGCCC CGCCCCCCGGATGATCGCTGA

Peptide Sequence

PEP ID	Zm00001d017416_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:195354933:195356837:-1 gene:Zm00001d017416 transcript:Zm00001d017416_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MGSRVSGPYMDSSPPPPPRPPSPPRHPPHPQGERHGGWEMPYQDVDHKLRALVGGAEGFG RHAIGGLYGAIHRVTSLQDNGPGSLREACHAEEPLWIVFEVSGTIHLHSYLRVSSYKTID GRGQRVVLTGKGLQLKSCHHVIICNLVFEGGRGHDVDGIQVKPDSTNIWIDRCTLADYDD GLIDITRQSTDITVSRCHFMRHDKTMLIGADPTHVGDRCIRVTIHHCFFDDTRQRHPRLR FGKVHLYNNYTRSWGIYAVCAGVEAQIVSQCNIYEAGGGPPKKTTVFKYMPEKAGDQEDV VAGSISSEGDAFLNGALPCLIDNPGSVFRPEDYYQQRTMEPASPALKDIIQLCAGWQSVP RPPDDR

Transcript Sequence

Transcript ID	Zm00001d017416_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:195354933:195356837:-1 gene:Zm00001d017416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	AGATGCGGTTCAACTAGCCCTCCGACCCCCCTCTCGAGAGTTCCGCTCCACCGCGGCGAA GGAAGTGGCGGAGGAGGAGGAGGATCCGCGCCTGCGCTGGGCCTTCGTGCGGAAGGTGTA CGCGGCCCCCCGCTGCCGTCTGGCCCACGTACATCGCCATCCTCCTGTCCCTGTCCCCGC TCGGACTCTTCCTCGCTGCCGCCGTGTCGGCAGATCTGGCCGGGTAGCCCGGTAGGAAGC GTCGTGGGAGGAGACAGGCGAGGCGTTCGACCGCCGCCGGCAGCTTAGGACGTACCGCGT CTCTGTTCTATGGGTTCACGAGTTTCGGGGCCCTACATGGATTCTTCGCCTCCGCCTCCG CCTCGTCCGCCATCGCCGCCGCGACACCCTCCTCACCCTCAGGGCGAGCGTCACGGCGGC TGGGAGATGCCGTACCAGGACGTGGACCACAAGCTCCGCGCGCTGGTCGGAGGCGCCGAG GGCTTCGGCCGCCACGCCATCGGGGGCCTCTACGGAGCCATCCACCGCGTCACGTCGCTC CAAGACAACGGGCCCGGGAGTCTGAGGGAGGCGTGCCACGCGGAGGAGCCCCTGTGGATC GTCTTCGAGGTGTCCGGCACCATCCACCTCCACTCCTACCTCCGTGTCTCCTCGTACAAG ACCATCGACGGGCGTGGCCAGCGCGTGGTGCTCACCGGCAAGGGGCTCCAGCTCAAGTCA TGCCATCACGTCATCATCTGCAACCTGGTGTTCGAAGGAGGCCGCGGGCACGACGTGGAT GGCATCCAGGTCAAGCCCGACTCCACCAACATCTGGATTGACCGCTGCACCCTCGCCGAC TACGATGACGGCCTCATCGACATCACGCGCCAGAGCACAGACATCACAGTCTCAAGATGC CATTTTATGCGGCACGACAAGACGATGCTCATCGGTGCCGACCCCACGCACGTCGGCGAC CGCTGCATCAGGGTCACCATCCACCATTGCTTCTTCGACGACACGCGGCAGAGGCACCCC CGCCTCCGCTTCGGAAAGGTTCACCTCTACAACAACTACACGCGCAGCTGGGGCATCTAC GCCGTCTGCGCAGGCGTAGAGGCCCAGATCGTGTCCCAGTGCAACATCTACGAGGCAGGT GGAGGGCCCCCAAAGAAGACAACTGTATTCAAGTACATGCCGGAGAAGGCCGGCGACCAA GAGGACGTGGTGGCAGGGTCGATCAGCTCGGAAGGGGACGCCTTCCTCAATGGCGCGCTG CCCTGCCTGATCGATAACCCTGGGTCTGTCTTCAGGCCAGAGGACTACTACCAGCAGCGG ACCATGGAGCCAGCGTCGCCGGCGCTCAAGGACATAATACAGCTCTGCGCAGGATGGCAG TCGGTGCCCCGCCCCCCGGATGATCGCTGACTTTCATCATTCTGATATGCTGCAGCTCGC TTCTGTAAGAATATTCGTTTCACGGAAGCACTGCATTTGTATGCATCTCATCCTAGGTAA TTCAGCATTTGTTTCATGGTAGAGCCGCATTTGTATGCCACTCCTCTTCATCTGCCCCCT CTCTGAAATGTAGTAGAAAAGTTGTTATGGTTTTCTATTTGTATCTTTATTTATAGTACA TACAATTCCCAATGTAAAGATATTTCTCTCATCCATAGCATTACAATAGCTTTTAGTTGT GAATGCTA