Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017409_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:195097638:195099542:1 gene:Zm00001d017409 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-GATA-transcription factor 3 description:GATA zinc finger family protein

Sequence

ATGGCGTCCTTCGTCGTGCACCACCACGGTTCGCCGCTGGACAGGGAGGGCAAGGTCAAG
ATGTCCGCCCTGGCCCTGAGGAGTAGCCTCAGGCCGTGCGAGGCCGCCGAGGAGGTCGGG
GCCGGGCAGGCGTGGTGCAGAGGCGCGGACATGGGCATCGCCGCCTTTGCCGATGAGTTC
TCCGTGGAGGACTTGCTGGACCTCGAGGACCTCTGCGAAGTTGACAAGGACTGCGCCGAG
CTCCCGCCGCCACCGAAGCTACCCGCGGCGCCGTTGGGAGCTGCGCGGCGGCCGCTGGAA
GGCGCAGTGGCAGGCCCTATGCGGAGCCCGACCACGACCATATGCGCGCTGTCGACGGAG
GCGCTAGTGCCGGTGATGAGGGCGAAGCGCAGCAAGCGCTCGCGTGGCTCCGTGTGGTCG
CTGTCCGGCGGAGCGCCCCTGTCGGAGTCGACATCGTCGTCTTCCACGGCCACCACGTCG
TCCTGCTCCTCGTCCGCCTCTTTCTCGCCGCTGTTACTCCTTCCGGCGGACCCGTCCCTC
GTCCTGTCCTCGCACCTCCTCGACGAGACGCCGCGGCCCAAGAAGAAGTCCAAGCACGGG
AAGCATGGCAAGAGCGGCAAGCCCAAGAAGCGCGGCCGCAAGCCGAAGCACCACCCCAAG
CCGCCCCAGTTCTCGGGCGGCGCCGCCTACGCGCCGGCCCAGGGCGACCGGCGCTGCAGC
CATTGCGGCGTGCAGAAGACGCCGCAGTGGCGCGCGGGCCCCGAGGGCGCCAAGACGCTG
TGCAACGCGTGCGGGGTCCGTTACAAGTCCGGGCGGCTGCTCCCGGAGTACCGTCCGGCT
TGCAGCCCCACCTTCGTGAGCAGCATACACTCCAACTCCCACCGCAAGGTGCTGGAGATG
CGCCGCAAGAAGGATGGCGACCTTGGCCAGCTCCCGCTCCCAGTCCCGGCCGCGCTTCTG
CTTGGGCCGGCCGTCGAGTCGTTCTAG

Peptide Sequence

PEP ID

Zm00001d017409_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:195097638:195099542:1 gene:Zm00001d017409 transcript:Zm00001d017409_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-GATA-transcription factor 3 description:GATA zinc finger family protein

Sequence

MASFVVHHHGSPLDREGKVKMSALALRSSLRPCEAAEEVGAGQAWCRGADMGIAAFADEF
SVEDLLDLEDLCEVDKDCAELPPPPKLPAAPLGAARRPLEGAVAGPMRSPTTTICALSTE
ALVPVMRAKRSKRSRGSVWSLSGGAPLSESTSSSSTATTSSCSSSASFSPLLLLPADPSL
VLSSHLLDETPRPKKKSKHGKHGKSGKPKKRGRKPKHHPKPPQFSGGAAYAPAQGDRRCS
HCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSIHSNSHRKVLEM
RRKKDGDLGQLPLPVPAALLLGPAVESF

Transcript Sequence

Transcript ID

Zm00001d017409_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:195097638:195099542:1 gene:Zm00001d017409 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-GATA-transcription factor 3 description:GATA zinc finger family protein

Sequence

GCCTCTCCTTTTCACCCGTTCCTCGTCTCCCTCCTGCGGTCCTGCCCCCCCTCCCCTGCA
GCCGCTCCCTCCATGGCGTCCTTCGTCGTGCACCACCACGGTTCGCCGCTGGACAGGGAG
GGCAAGGTCAAGATGTCCGCCCTGGCCCTGAGGAGTAGCCTCAGGCCGTGCGAGGCCGCC
GAGGAGGTCGGGGCCGGGCAGGCGTGGTGCAGAGGCGCGGACATGGGCATCGCCGCCTTT
GCCGATGAGTTCTCCGTGGAGGACTTGCTGGACCTCGAGGACCTCTGCGAAGTTGACAAG
GACTGCGCCGAGCTCCCGCCGCCACCGAAGCTACCCGCGGCGCCGTTGGGAGCTGCGCGG
CGGCCGCTGGAAGGCGCAGTGGCAGGCCCTATGCGGAGCCCGACCACGACCATATGCGCG
CTGTCGACGGAGGCGCTAGTGCCGGTGATGAGGGCGAAGCGCAGCAAGCGCTCGCGTGGC
TCCGTGTGGTCGCTGTCCGGCGGAGCGCCCCTGTCGGAGTCGACATCGTCGTCTTCCACG
GCCACCACGTCGTCCTGCTCCTCGTCCGCCTCTTTCTCGCCGCTGTTACTCCTTCCGGCG
GACCCGTCCCTCGTCCTGTCCTCGCACCTCCTCGACGAGACGCCGCGGCCCAAGAAGAAG
TCCAAGCACGGGAAGCATGGCAAGAGCGGCAAGCCCAAGAAGCGCGGCCGCAAGCCGAAG
CACCACCCCAAGCCGCCCCAGTTCTCGGGCGGCGCCGCCTACGCGCCGGCCCAGGGCGAC
CGGCGCTGCAGCCATTGCGGCGTGCAGAAGACGCCGCAGTGGCGCGCGGGCCCCGAGGGC
GCCAAGACGCTGTGCAACGCGTGCGGGGTCCGTTACAAGTCCGGGCGGCTGCTCCCGGAG
TACCGTCCGGCTTGCAGCCCCACCTTCGTGAGCAGCATACACTCCAACTCCCACCGCAAG
GTGCTGGAGATGCGCCGCAAGAAGGATGGCGACCTTGGCCAGCTCCCGCTCCCAGTCCCG
GCCGCGCTTCTGCTTGGGCCGGCCGTCGAGTCGTTCTAGCCGGCGCTGTACATTTTTTCG
TCCGCGGGTGGAGCTGTTTAACCTGCTGTACCGTACTTGGTTTTTTTTTCTTTCTCTTCC
ACTTCTATATTTAGTAGTTGTGCTGTACTATTTAGCTAGAGCTCTGAATTGTAGAAGCTT
TATTAGGTCGAGTTAGGTAGTAGAGATTAAGATTTCCATGGTTGATTAGGATTGTTAGGG
TATGTATGGCCATAGTACTTGTGGTAGTAGTTAAGAACTTGGTGAGGTGTTTGGCCTGAC
CTACGAGGAATGATGTTGTCATGTCGAGGCGCTGCTGGCACCAGTGACAAGAAAGTTAGG
CGTGCCTTGGCGCGGAACATGGAACTGTCTGCCTTGTTGTAATCGAGAGTGTCAGGCGAG
TAAGAAAGTGATTGTTTGCATT