Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017395_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:194467065:194478849:1 gene:Zm00001d017395 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal protein TL20.3 chloroplastic
Sequence

ATGACTCCCGCATCCACCTCCCCTCTCGCCGCCGCCGTCCTGCCCACGAACTTATCTTCC
TTCTCTCGCTGCCCACCTCGCCGCCTCCCGCGCATCTCCTGCCTGGCAGCGCCCGAACGC
GGGGGCAACAATGCGTCGAACGCCTCGCCGGCACCGCAGCAGCCGAGGTGGGGTGCCGCG
GTATCCGCCGCGCTCGCGGCGGCCGTGGTTGCCGCCTCTATGCCAGCTTACGCGGACCTG
AACAAGTTTGAGGCCGAGCAGCGGGGCGAATTTGGCATTGGCTCTGCCGCGCAGTTCGGC
TCGGCCGATCTCAAGTATGCCAGCACCTCTGCTTCTTCATCTCTTCTTCATGACCATTTT
GTTGTTACATTGCCTAGGCGGGCCAACTTCACATCCGCTGATATGAGAGAGTCAGATTTC
AGTGGTTCCACATTCAATGGTGCCTATCTTGAAAAGGCTGTTGCTTATAAGGCAAATTTC
ACTGGTGCTGATTTGAGTGATACATTAATGGACCGCATGGTTCTGAATGAAGCTAACCTT
ACAAATGCTGTTCTTGTACGGTCAGTCCTCACACGTAGTGATCTTGGAGGAGCCATCATT
GAAGGTGCTGACTTCAGTGATGCTGTTATTGACCTATCACAGAAACAGGCATTATGCAAA
TATGCAAGTGGGACCAACCCCATGACAGGGGTGAGCACTCGAAAAAGCCTAGGATGTGGC
AATAGCCGTCGAAATGCATATGGGAGCCCTTCATCCCCTCTGTTGAGTGCCCCGCCACAG
AAGATCCTTGACCGAGATGGTTTCTGTGATCCAGCTACTGGTATGTGCGATGCAAGCTGA

Peptide Sequence

PEP ID

Zm00001d017395_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:194467065:194478849:1 gene:Zm00001d017395 transcript:Zm00001d017395_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal protein TL20.3 chloroplastic
Sequence

MTPASTSPLAAAVLPTNLSSFSRCPPRRLPRISCLAAPERGGNNASNASPAPQQPRWGAA
VSAALAAAVVAASMPAYADLNKFEAEQRGEFGIGSAAQFGSADLKYASTSASSSLLHDHF
VVTLPRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANL
TNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLSQKQALCKYASGTNPMTGVSTRKSLGCG
NSRRNAYGSPSSPLLSAPPQKILDRDGFCDPATGMCDAS

Transcript Sequence

Transcript ID

Zm00001d017395_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:194467065:194478849:1 gene:Zm00001d017395 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal protein TL20.3 chloroplastic
Sequence

ATGACTCCCGCATCCACCTCCCCTCTCGCCGCCGCCGTCCTGCCCACGAACTTATCTTCC
TTCTCTCGCTGCCCACCTCGCCGCCTCCCGCGCATCTCCTGCCTGGCAGCGCCCGAACGC
GGGGGCAACAATGCGTCGAACGCCTCGCCGGCACCGCAGCAGCCGAGGTGGGGTGCCGCG
GTATCCGCCGCGCTCGCGGCGGCCGTGGTTGCCGCCTCTATGCCAGCTTACGCGGACCTG
AACAAGTTTGAGGCCGAGCAGCGGGGCGAATTTGGCATTGGCTCTGCCGCGCAGTTCGGC
TCGGCCGATCTCAAGTATGCCAGCACCTCTGCTTCTTCATCTCTTCTTCATGACCATTTT
GTTGTTACATTGCCTAGGCGGGCCAACTTCACATCCGCTGATATGAGAGAGTCAGATTTC
AGTGGTTCCACATTCAATGGTGCCTATCTTGAAAAGGCTGTTGCTTATAAGGCAAATTTC
ACTGGTGCTGATTTGAGTGATACATTAATGGACCGCATGGTTCTGAATGAAGCTAACCTT
ACAAATGCTGTTCTTGTACGGTCAGTCCTCACACGTAGTGATCTTGGAGGAGCCATCATT
GAAGGTGCTGACTTCAGTGATGCTGTTATTGACCTATCACAGAAACAGGCATTATGCAAA
TATGCAAGTGGGACCAACCCCATGACAGGGGTGAGCACTCGAAAAAGCCTAGGATGTGGC
AATAGCCGTCGAAATGCATATGGGAGCCCTTCATCCCCTCTGTTGAGTGCCCCGCCACAG
AAGATCCTTGACCGAGATGGTTTCTGTGATCCAGCTACTGGTATGTGCGATGCAAGCTGA
GAGGTTTGATCCAACATGGAAACTGGTCAATGGATGGTGTACATACATTGGAGATTGAGT
AAGAGCAGAACAGTGCAGAGAAACAAGTCGTTTTTCTTTTCCTCTTGCCATTGTTGTAAC
ATTGCAACACGGAATCAGGTAAAATTCAGGATGTAGATGAGATATGCACGCTGAGTACTG
AATGGCATGTATAGCATAGTATGTATACGAAAATAGATCATATCAATCATGTGCTTCATG
CTTGAAAGGAGTGGCCCCTGCCTTGTTCTAAAGCCAACATAGCCAAAAGCAGAAGTTCAA
CAGAGGAGTGTCTCAGCAAATAAACTTTCCACTCCATTTCACAAACATTGCTGATGCATC
GGCAGCAACCAGAGCTGCCGTTCTGGATGAACCGCACAAATAGACGTCCATCGACAGCTT
GACTGTTTGTGCAGATTGTCAGGTCAGTTGCTGAAGTCCCTCCTTAGCTTCAGCTTTCAG
CTAGCTACCTTGTTAACATCAGGTCCTGAAACCTGATATCAAATAACAATATATATATAT
ATAACCACTTCGGTTACATGTTTATTAT