Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017373_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:5:193769098:193776069:1 gene:Zm00001d017373 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 1
Sequence	ATGTCAGATGCAGAGATTGAACGGAGAATGAAGGAAGCCAATGCTCAAGCATTCCATCAA ACAGCGACTAACTTTGTCATGCCAGTAGCCCCTGCTCAGAATTTTGTTTCGTCTTCAGTT GCACCATTAGCGCCACCTCTTAGCATGATGCCGCCTCCATTCAGCCAGCCAGTTGTTCAG CCAGGTTTTTCAGATCCACTGCAAGGTTCTCCAGCTAGAGAAGAGGGTGAAGTTCCTGAG TCTGAGTTGGATCCAGACACAAGGAGAAGGCTTCTCATATTGCAGCATGGTCAAGACACA AGAGATCCTACACCTCCACACCCAGCGATACCACCAGTGCAAGTTCCAGTTCCTCCAGTG CAACCTCATGGGAATTGGTTTCCCACAGAGGATGGGATAAACCCAAGTAACCTGAGTAGA GGTTCAGCAGGTTTCACCGTTGAATCCGATTCTATGCCCTATGAGAAAAAACAACCACCT CATCCTTCATTCTTTCATGGTGGGGATAGTCCTATGTCGTCTGATAGATTTGGCTATCAG AACCAGAGGTTTCCCTCTCAGCTACCGCACACCGAGGATCACCACATGCTTCAGAACCAT GCACCTCCAAAATACAGATCCTTTTCTGGTGAGGAGCTAGCAACTCGGCATGTTCCCTCA AGCCAAAGAAACCATATAGAATCAGGAAGACACTTTTCACAATATGCTGGGACCTCTGCT GGCGTATTAGAGGGCATTGCTGTGAAATGCGGATCTAAGGTGGAGTACAGGTCAACATTA TGTGATACCGCAGAACTACAATTCTCTATTGAGGTTTGGATTGTTGGAGAAAAGTTTGGT GAAGGAATTGGTAGGACAAGGAGAGAAGCACAGCGCCAAGCTGCAGAAATGTCTTTAAGA AACTTGGCCAATAAATACTTGTCATCTGATCCAAATAAGTTGACTGATATGAAACAAGAT GCTTTCGGTAGCAACAGAAACATCTTTGGTTACTCTGGAAATACTAGGGATGATATGTTG CCACTTTCAAGTACTTCTGAGGAATCTCGCTTTATGAAAATGGAGGAGAACAATTCCAGG AAAACAGGAGATTCTGTCACTGCTCTCAAGGAACTTTGCACAGTTGAGGGATATAACTTA GTTTTTCAAGCCTGTCCATCTCCAGCAGATGGTTTAGTTGGGAAAGAATCTTATGCTCAG GTACAAATTGGTAGGCAAATTCTAGGCAAAGGAGTTGGGTTAACATGGGAAGAGGCCAAG CTCCAGGCTGCTGATGAGGCTCTTGGAACTTTAAGATCCATGCTAGGTCAACTTGGTCAT AGACGATCTGGCTCTCCAAGGTCATTGGCACCGAATTTTAACAAGCGGTTCAAGCCAGAT TTTCCAAGGACCGTGCAAAGAGTTCCTTATGGAACATATTCTAGAATCGAAGGCCATGCT CCTTAG

Peptide Sequence

PEP ID	Zm00001d017373_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:5:193769098:193776069:1 gene:Zm00001d017373 transcript:Zm00001d017373_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 1
Sequence	MSDAEIERRMKEANAQAFHQTATNFVMPVAPAQNFVSSSVAPLAPPLSMMPPPFSQPVVQ PGFSDPLQGSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPTPPHPAIPPVQVPVPPV QPHGNWFPTEDGINPSNLSRGSAGFTVESDSMPYEKKQPPHPSFFHGGDSPMSSDRFGYQ NQRFPSQLPHTEDHHMLQNHAPPKYRSFSGEELATRHVPSSQRNHIESGRHFSQYAGTSA GVLEGIAVKCGSKVEYRSTLCDTAELQFSIEVWIVGEKFGEGIGRTRREAQRQAAEMSLR NLANKYLSSDPNKLTDMKQDAFGSNRNIFGYSGNTRDDMLPLSSTSEESRFMKMEENNSR KTGDSVTALKELCTVEGYNLVFQACPSPADGLVGKESYAQVQIGRQILGKGVGLTWEEAK LQAADEALGTLRSMLGQLGHRRSGSPRSLAPNFNKRFKPDFPRTVQRVPYGTYSRIEGHA P

Transcript Sequence

Transcript ID	Zm00001d017373_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:193769098:193776069:1 gene:Zm00001d017373 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 1
Sequence	ATGGCTCAATCGACAGAGACTTCGATGAAGGACTCTTACCAAGGATTAGTAATGTTCATT ATGAAGATGAAGTAAATGATATCTCATCTGCGCCAGATGTTGGCAATTATTTGATAACAG AGGATGAGAATGTCGCATTAGTGAATGGAAATAGAGATTCATTGCCTTTTGATGGTATGT CAGATGCAGAGATTGAACGGAGAATGAAGGAAGCCAATGCTCAAGCATTCCATCAAACAG CGACTAACTTTGTCATGCCAGTAGCCCCTGCTCAGAATTTTGTTTCGTCTTCAGTTGCAC CATTAGCGCCACCTCTTAGCATGATGCCGCCTCCATTCAGCCAGCCAGTTGTTCAGCCAG GTTTTTCAGATCCACTGCAAGGTTCTCCAGCTAGAGAAGAGGGTGAAGTTCCTGAGTCTG AGTTGGATCCAGACACAAGGAGAAGGCTTCTCATATTGCAGCATGGTCAAGACACAAGAG ATCCTACACCTCCACACCCAGCGATACCACCAGTGCAAGTTCCAGTTCCTCCAGTGCAAC CTCATGGGAATTGGTTTCCCACAGAGGATGGGATAAACCCAAGTAACCTGAGTAGAGGTT CAGCAGGTTTCACCGTTGAATCCGATTCTATGCCCTATGAGAAAAAACAACCACCTCATC CTTCATTCTTTCATGGTGGGGATAGTCCTATGTCGTCTGATAGATTTGGCTATCAGAACC AGAGGTTTCCCTCTCAGCTACCGCACACCGAGGATCACCACATGCTTCAGAACCATGCAC CTCCAAAATACAGATCCTTTTCTGGTGAGGAGCTAGCAACTCGGCATGTTCCCTCAAGCC AAAGAAACCATATAGAATCAGGAAGACACTTTTCACAATATGCTGGGACCTCTGCTGGCG TATTAGAGGGCATTGCTGTGAAATGCGGATCTAAGGTGGAGTACAGGTCAACATTATGTG ATACCGCAGAACTACAATTCTCTATTGAGGTTTGGATTGTTGGAGAAAAGTTTGGTGAAG GAATTGGTAGGACAAGGAGAGAAGCACAGCGCCAAGCTGCAGAAATGTCTTTAAGAAACT TGGCCAATAAATACTTGTCATCTGATCCAAATAAGTTGACTGATATGAAACAAGATGCTT TCGGTAGCAACAGAAACATCTTTGGTTACTCTGGAAATACTAGGGATGATATGTTGCCAC TTTCAAGTACTTCTGAGGAATCTCGCTTTATGAAAATGGAGGAGAACAATTCCAGGAAAA CAGGAGATTCTGTCACTGCTCTCAAGGAACTTTGCACAGTTGAGGGATATAACTTAGTTT TTCAAGCCTGTCCATCTCCAGCAGATGGTTTAGTTGGGAAAGAATCTTATGCTCAGGTAC AAATTGGTAGGCAAATTCTAGGCAAAGGAGTTGGGTTAACATGGGAAGAGGCCAAGCTCC AGGCTGCTGATGAGGCTCTTGGAACTTTAAGATCCATGCTAGGTCAACTTGGTCATAGAC GATCTGGCTCTCCAAGGTCATTGGCACCGAATTTTAACAAGCGGTTCAAGCCAGATTTTC CAAGGACCGTGCAAAGAGTTCCTTATGGAACATATTCTAGAATCGAAGGCCATGCTCCTT AGATGCCTGCATGAATGATGTGCCTGGGCACTACATTTTGAAAGTGGACGAAGCTTTGAA CTGTGAGGTCTCCACAAATTGAATACAAGCCCTGGATTCTTGGCTTCTTGTGGGCTTCCA AGGCTCTCACAGGCCACCACTGGCCATGAGAGTACCGACGAATATATTTATGGAAGGGCC AAGAAACTGTGAAGTATGAATGGTGGCCATGACTTCATACAGAATTTCACTGCCGTTGAC CAGTCGCCAGTGTTACCCCATGCTGTCAACTTGGCATAATTGTTGACCTGGAAGTTTTAT GGTTGAACCAGGGATTGATGCAGGCTTGCGGCTCCATTTCATTTCTGGGTGTATGCCAGG AATCCATGGATCAAAGGGCAGCGCTGTAGTTGGACACTTTTTTTTCCCGTGCTCTGGTTC AGTTGAAAGTTGGACCCCAGTAGGTTGGAGCCTTAGCATGTAGCCAGTTTTATTAGTGCT AAGTTTTTAGGCAAGTTATAAGTTATAGCACAGAATTGAGTACTTGACAGTGTTACCGTT ACATTGTTTATGTAGTCATCTTCATTAGCAGCCTAGGCAGGCAACATGAATCCAGTAGCT GACAGCATTCATTTACTATATATATAATTATAGTATGTTGTAGTCATCTTGTAATAGAAT ATGCCCCCGTTTCTTGGG