Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017361_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:193663171:193666290:-1 gene:Zm00001d017361 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGCAACAACATTCCCAGCCGCCGCCGCCGCCGCCCGGCCGTCTCGTCCCCTCTCGTCGC CTTCTCAGCCAAGCTAAAACCTCGCTCTCCTTGTCCAGTCAGATTCTCCTCCGCAATCCG CCATTGCGCTCCGTTATGCAGGCGTTCGCGCGCCTCTCCTCCGCTGCCTCCAGGAAAGTG ATCGCGGGTGTCTCTAGCGCAACCACACGGTCGTGCTACCGGACCTCCCGGGGGTTGGCG CATGCGGCGTCGCTGCCTGCGCAGGAGCCTCCACCGAAGGGGCAGAAGAGGATTACGAAG CAGGAGAGGAGGACTAGGATAATGGAATTTATTGAGAATTATAGGGCTTCAAATGATGGC AAGTTTCCTACTATTAAAAATATCCGTCAGCAAGTGGGGGGCAGTCACTACACAGCGCGT GAGATAATTCAAGAAATGGAGTATAATAATGCAAAATTACCACTGAGCAATGCCAAGGCA GCTCCACTTCAAGGAACAGTTGAAGTCATTGAGCACTCCATGCCTAAGGATGAAGCCATA GTGGTTGAAAGTCATGGAATACTAGAAGTTTCTGAGCACTCCATGACCAAGGATGGTGAT GAAGCGGCTCAAATTCAAGGAACAATTGAAGTTTCTGAGCACTCCTTCCCTAAGGATGAA TGTAAGTTGGCTCAGTGTCAAGGACCATTTCGATTTCCTGAGCACTCAAGGCCTAAGGAC GACAGTGGAAATGTTGCTAAACATGATATGGACACTCCAGAAACCTGTAAGACTGCAGAC TTCCCCGCTTTATCTGATCAAACAGAGAGCGAGATAATGGAGGACCTAACGGACAAACCA GACCCTGGAAACCAGCAAAGGGAAATAGAAGCTATCAAATTTAATTTGAAGCATTATGAA AAACCCTTGAATGCAAATGATTCAAATGCAAAGACGCATGCCAGAGAAGACAACCCAAAG CTTGAGGAATCCGCGAACACAGGACTTTTGGGCAGCCTGAAATCTTTTGCTTATGGCATC AGAAACTTCTGGAAAAATCTGTAA

Peptide Sequence

PEP ID	Zm00001d017361_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:193663171:193666290:-1 gene:Zm00001d017361 transcript:Zm00001d017361_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MQQHSQPPPPPPGRLVPSRRLLSQAKTSLSLSSQILLRNPPLRSVMQAFARLSSAASRKV IAGVSSATTRSCYRTSRGLAHAASLPAQEPPPKGQKRITKQERRTRIMEFIENYRASNDG KFPTIKNIRQQVGGSHYTAREIIQEMEYNNAKLPLSNAKAAPLQGTVEVIEHSMPKDEAI VVESHGILEVSEHSMTKDGDEAAQIQGTIEVSEHSFPKDECKLAQCQGPFRFPEHSRPKD DSGNVAKHDMDTPETCKTADFPALSDQTESEIMEDLTDKPDPGNQQREIEAIKFNLKHYE KPLNANDSNAKTHAREDNPKLEESANTGLLGSLKSFAYGIRNFWKNL

Transcript Sequence

Transcript ID	Zm00001d017361_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:193663171:193666290:-1 gene:Zm00001d017361 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	AAACTTTGAATCCCTAAACCTTATGCAATGCAACAACATTCCCAGCCGCCGCCGCCGCCG CCCGGCCGTCTCGTCCCCTCTCGTCGCCTTCTCAGCCAAGCTAAAACCTCGCTCTCCTTG TCCAGTCAGATTCTCCTCCGCAATCCGCCATTGCGCTCCGTTATGCAGGCGTTCGCGCGC CTCTCCTCCGCTGCCTCCAGGAAAGTGATCGCGGGTGTCTCTAGCGCAACCACACGGTCG TGCTACCGGACCTCCCGGGGGTTGGCGCATGCGGCGTCGCTGCCTGCGCAGGAGCCTCCA CCGAAGGGGCAGAAGAGGATTACGAAGCAGGAGAGGAGGACTAGGATAATGGAATTTATT GAGAATTATAGGGCTTCAAATGATGGCAAGTTTCCTACTATTAAAAATATCCGTCAGCAA GTGGGGGGCAGTCACTACACAGCGCGTGAGATAATTCAAGAAATGGAGTATAATAATGCA AAATTACCACTGAGCAATGCCAAGGCAGCTCCACTTCAAGGAACAGTTGAAGTCATTGAG CACTCCATGCCTAAGGATGAAGCCATAGTGGTTGAAAGTCATGGAATACTAGAAGTTTCT GAGCACTCCATGACCAAGGATGGTGATGAAGCGGCTCAAATTCAAGGAACAATTGAAGTT TCTGAGCACTCCTTCCCTAAGGATGAATGTAAGTTGGCTCAGTGTCAAGGACCATTTCGA TTTCCTGAGCACTCAAGGCCTAAGGACGACAGTGGAAATGTTGCTAAACATGATATGGAC ACTCCAGAAACCTGTAAGACTGCAGACTTCCCCGCTTTATCTGATCAAACAGAGAGCGAG ATAATGGAGGACCTAACGGACAAACCAGACCCTGGAAACCAGCAAAGGGAAATAGAAGCT ATCAAATTTAATTTGAAGCATTATGAAAAACCCTTGAATGCAAATGATTCAAATGCAAAG ACGCATGCCAGAGAAGACAACCCAAAGCTTGAGGAATCCGCGAACACAGGACTTTTGGGC AGCCTGAAATCTTTTGCTTATGGCATCAGAAACTTCTGGAAAAATCTGTAAATGTCTTTC TTTTTGGCCGTCGCCTAGCACGCTTGGTCCTCGTGGCTTCATCAATTTCTAAAGCTATGG TCACTAGACCGTGCATATGACGGTGCATCACACTATTTTACGCTGCAAACTATACGGTTT GCAGAGTGGAGTTTGAAAATGGAGGCGAGATGAGTAAAGTATCTGGAGATAGCCTAATCG GACTAAAATTGAGAAGGCTACAGAATTGATAACTTGTCCCTTTGTTAAGTGTTTGCGATA CAGGGCCAATTTGTAAAGTTCTTTTTATGCGATACAACTAATGTCAACTTCTCGCTGTGG CACTTTGATAAAGCTAGATACAAGGATTATTGTTACTGCCCTGTTGTGCTGGTGGTAACT TTGTGTTTGTCAATTGTTGTGAACACATTGAACGTTGGGCACAAATTTCATGC