Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017213_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:5:189093350:189100105:-1 gene:Zm00001d017213 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
Sequence	ATGTTTGCCTTGATCATTGTTTGTGATATTGCGGTTTATCTACAGGGTGACGATGACAAT TCTTCAAGCAGAAAATGTAACACATCATCATTAAAAATGTTACTAGAGAAGGAGATGTCT AAAGAAGCAGAGTCAAAGAGAAGACATCCAAGTGTCATTGCCAGATTAATGGGTCTTGAG GAGGATTTACCTACTAAAGAACCAACTGTACACCATACCGTAAGTGACTTGAGTAGAGAT TTGAATGCCACAAACAACACCTTACAGGGAAAAGAACACCATCACTTTATAATGTCGAAG ACACAAAACTACCAATCCTGTCATGAAAAAATCGAATACAATGATGTTTTTGAAGTATCT GAAGGACAACCGGGAACAGACTGTTTTCATGATAGAACTTCACAGAAAGGATGGTCTTCC GAGAACAAGAGTGAGCAATTCAATATTGCACGAGACAAGATCATGGAACCAGAACAGTTA GCTATTGAAGAGAAGCTCCTTTGTACAAAGGAGTTGCCTGAAGCTCTTGTTTTTCCATGT TCAAATAGAGATTTATTTCTTGAATTTCCTGAAGAACATAACCCCACATTCTCAAGACAG TCGAGTGGGCTTCATGCAAACCAAGCACCGCCTCAAACAAAACGCATTACAGTGCTGAAA CCAATTAGATCTGTTGATAGTGATGGCATAAGACGACCCAGAGCAGAAATTGGTAAGCAA AATGTATTGAAGATGAGAAGGTTCCATCAGATTCCTAGTTCAAAGGAAGAGATACCTTCC CAACCAAGTAGAATAATCCTTTTGAGGCCTACCCCAGGGAAGCCAGGTATATCAAAGGCA AAGCTGACATCCAGGGCAACTTCATTTCAGTTACCTAACCGTAACAGTCTCAATGGATCA TTAGATGATAACCAGGCATCCATAGGATCTGCAGGACTAGTGCATGGTATGATGCAGTGC CGGCAAGATGGATGTCACCAAAGAGATGATTCTTTATTATCTTCTGCATACTCAAATGGA TATGGGGGAGATGAAAGCTCATTCAGTGATTCAGAAGTTGATTATACCAGTGGCTCTGAA ATCAACTATATTGAAGATTGTGATACCCTCAGTGACTCCGAGGGAGGTAGCCCTCTGTCA AGACACTCATGGAATTACATAAGAAGATATGAAGGTCAATGCTCAAGTTCATCCTTTAGC AAAATATCCCACTTTTCTGAGTCGTCAGTTGTAACGGAGGCCAAAAAACAGATTTCAGAG CGATGGTCAATGGTTACATGCAATGAGATGAGTCAAGTGCAACTGTCGAGAAGAAAATGC ACGTTAGGTGAGATGCTCTCCATTAAGGAAGCAAAGGAAGACGAGGCCACCACTGGGATG TTTTATGTTTCCAGCAACCAGTCATGTGGCCTGGAGAATGAACTGACTACACGTTCTACA AATGTAACTACTTCTAGAAAAAATGGTGACAATGGGGAGAGATCTTCGAAATTGCCAAGA TCAAAATCTGTTCCAGTGATTTCATCCACGTCTGATAACATGACGGTGAACATGCAAGCT TCAAATCCTGAGAGCTGCAAACTTAAAGTGGCTGTTGTGTCAAATAAAGGAAAATCAGCT TTCAAGGGAAGAGTTTCAGATTTTTTCTTGTCTAAAAGTAAAAGGCCAAGAAGGCAGATG CCTGCTTATCATCAATCTGATTGTATTGCTGAGGGGCTTGAAGGCTGTATTACTCATAAT AGACAGGACTGCAATCATAAAATGGATGCCATCGAGAAAGCGATGCATTACGATGATGAA TTCAATAGTTTTTCGACACGAATATCAACTAGCATACCAGATAGAACAACTTCTGGTGCA TCTGTTTCATTGGGCAGTTCAACCGGAAACCTGGATAAACTAGGAGTAAACAAATGCCTA AATGGTAACCGTGATCAACCAAGCCCTACCTCAGTTCTTGATGCACCCTCTGAAGATAGC AGTTGTAATGAGCCTGAAACACTTGGAACAACTACTTCCAAGAATGCGATCTGGTTTATA TGTTGA

Peptide Sequence

PEP ID	Zm00001d017213_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:5:189093350:189100105:-1 gene:Zm00001d017213 transcript:Zm00001d017213_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
Sequence	MFALIIVCDIAVYLQGDDDNSSSRKCNTSSLKMLLEKEMSKEAESKRRHPSVIARLMGLE EDLPTKEPTVHHTVSDLSRDLNATNNTLQGKEHHHFIMSKTQNYQSCHEKIEYNDVFEVS EGQPGTDCFHDRTSQKGWSSENKSEQFNIARDKIMEPEQLAIEEKLLCTKELPEALVFPC SNRDLFLEFPEEHNPTFSRQSSGLHANQAPPQTKRITVLKPIRSVDSDGIRRPRAEIGKQ NVLKMRRFHQIPSSKEEIPSQPSRIILLRPTPGKPGISKAKLTSRATSFQLPNRNSLNGS LDDNQASIGSAGLVHGMMQCRQDGCHQRDDSLLSSAYSNGYGGDESSFSDSEVDYTSGSE INYIEDCDTLSDSEGGSPLSRHSWNYIRRYEGQCSSSSFSKISHFSESSVVTEAKKQISE RWSMVTCNEMSQVQLSRRKCTLGEMLSIKEAKEDEATTGMFYVSSNQSCGLENELTTRST NVTTSRKNGDNGERSSKLPRSKSVPVISSTSDNMTVNMQASNPESCKLKVAVVSNKGKSA FKGRVSDFFLSKSKRPRRQMPAYHQSDCIAEGLEGCITHNRQDCNHKMDAIEKAMHYDDE FNSFSTRISTSIPDRTTSGASVSLGSSTGNLDKLGVNKCLNGNRDQPSPTSVLDAPSEDS SCNEPETLGTTTSKNAIWFIC

Transcript Sequence

Transcript ID	Zm00001d017213_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:189093350:189100105:-1 gene:Zm00001d017213 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
Sequence	CATGGCTGCTTCTCGTGCAAAGTTGTTTTTTTGGTAGCCATTTGGTAGGGCCTGTAGATT TGTAGAAGCCGGAGGTACTAAAGCCGGCTTTGAAGCTCTGCCAAAGGGGCCCAAAGTGGT ACTAGAATATACGAAGGCTTGTTTAGCATTGACTCCGGCTTCGTACCATAATGCATGGAA CAGCCAGAGCCAGCAAAGCAAAAATTAATGGCTTCACTGGTCCAGTGTATTTAGAGAAAG AGGTAAAAGCAATTCTTGCCTACAGTCCACAGAGGAGACGAACTGGCTAAAGCTCCACCA AACTGGGCCTAAGAGTCAGCAATGAGCAAACCAAGACAAAGTTTATGGTTCATGGTGTAT TTTAATCTGCAGACACTGCAGCATTGCTGCATGGGGGAATTGTCTCGGTTTCAGGGCACA TGTGGAGACATACATACCTAAACGTCTCAATATTCTTATTCTTGATTACATATTTTATTC AAAGTAGTCCCTCTGTTCCAAAATAGTTCTCGCTTCGTCCCTAAATATTTGTCATTCTCG GATTTCGAGGAGTCAACTTTTTTTTTTTACTTTGATAAAATATATACGAGGAATTGATCG ACATAAATACCATAGCGGTAACTATTTTGGGACGGAGGAAGTAGAGTGCATGGCCTCTAC TCTATCACAGCATCATTACCCTTTTCTTTTCCTGTCAAGATTCAAGGTGCTGACAAGAGT TCCAGAGAAAATCTGGAGCCTTTAAGGATGGCGTTGGTGCAGACTGCAGAGATTCCTCTG TCACCTGTAAATCTTGGCATTATTTTGGTTGTCCATGGCTTCATAGTTATTCTGTGCCAT TTTTTTAGCTTTCGCACTTGTCTGTTCAGAGTAAGAGTAAAACATTCGAAATCTGTGCTC TTGATTGGTATTTTTCAGGTCACTCTTATTACCATTCTGCCTTCCATTAACTGTTATACC TGACCAAAATGCAGTTTTCAGAGATTGTTGTCTTTTCTGCAAGATTCCTTTTAGGAGTAC ATGAGGACTCGTTGATGTCATGTCCTTATGCGTCCATATCGTTGTTACTTGTGTTCATTG GCTCTGTGGACTTGCTTTTATTTTGTCTTTTTGTCTGCTACTCTGCTAGACTTTTACTAT TCCATACCGCCAAGGGCTGCTCTGTCCACCTCGAATATTTTAGTTCTCTGTGCTGATTTT CTTTTTGTGTAAATAAAGTTGGACAAGAAGAGGCCATAAACTGTGCTTCTCTTTTGCACC AATCTGGACTAAAAGTGCATGCAAAATGTGTCTCTTGAAGTTTTCCCAATGAGCATCTTC CTACAGTAATGGCAACAGCCTTTTTGTATCTGGTACCCCTTGCATTTAAGGTGCTGTTTG ATTCACATATTTGTAACGTAAACGGTAACCGATAACGTTAAACCATATTTGTTTAAGTCC AACCGTAATCACTAATCAGATACCACACTAGAAACTGATACCGTCCTATTCAAACTTGTT ACCTCTCGTAATCGAGTGTGAATCTATCATGTGGGGCCGCATGTACAGCAGACGCAGGCA CACCCGCGACGTGCGTAGGGCGGCCGAGCGCGCAGGCCACAAGGAGGCGCCAACAGCCAG GGGCTGATTAGGAGCCGGTTTGAATAAGTCCAGAGAATAAAATTTAGATGAGAGATTTGA GGAGAGGTAGTTAGCATTAGACAAGTCCAGGAGAGTAAGATTAGATGAGAGTTTTTAGGA AGAGTTGGTTAGCACTAGGGCTATTTGTAAGCCGCATGGCAGCAGGGAATAATCAAGCAA TTTATTACCAGTCTAATCCCCTCTCCCCAGTTTCCATCAAGCCTGCGGCAGAGATGACTA ACCTCGCTGGAGAAGACGGACCGAGACTGCAATCTCCGTAGTCGAGGGCCAGCTACCCTA GGGGCCGACGCCCTTGACAGAATCATTACCATTACCATTTACGTTACGTTTCGTGAACCA AACGTCATCTAAATCCTAAGGGCTTTAGACGCTAAGAGTCTCCTGAAATATATTCATTGC AGTTACCATTCCTCTCAAGTATTATTATGTTAGTGCTAGCTGACCACTATTCTACTGAAA TTTTCCTGCTCTTAGAGTTTACCTAGTCACCTGGCAAGGGCTGTGATCTGATCGTATGGT TTATTTACTTGGTTTCAGTCATACAACTCACATATGGTTCATGGAGTTTCAGATCTTTTT GTTTGCTTTTCAGGGTTTCATGTTCCAAATGGACTGTTTTAAGCTGGGTGAGCTACATTT TATCAGGAGAAATTGATCAATTGATTTGAAGTTTGAACAATGTACCAGAATGTATGAAAT AAAGCCAGTAATTGATCACGCTCATGGAGATGGTACATATCACTTATAATCTCTTTTGGG CACTTCTTGAGTAGGCCCTATATTTATTCTATTACTTTTGTGACATTTGGATGTAATGAT GGAGGGCTACTTTTAAAAAATAATCGCGGGATTCATTGGGAATAAGATCTGGCATGCTGT TAAAAAATTGTCATCGTTCTTTTTTATGTTGGGATAAATCATAGATGATACTGTATTGCA TTCAACGAGTAGTTCTTGTTTTGCTGTTTCTGGCCTCCGTAAGGAGTGATTTGTATTTCG TTCTTCTATAGACCGGTGTTCTTCTTAATATATTTTAAGGTGCAGTTCCCCTCTGTTTTC GAGAAAAAAAGTAGTTGATTGTAGTATTATACCTTGTGTTTTCAGATAATGGCAAAACAA TCATTTATTCTGCCGTTCCTACTTTTTATTGATTGGATTATTTTTATAAGTCAAGTTTAT CCAGGCACTAACCTTTTACTTTGTATCATTTACATCAAAATACCTTATTCAGCGTTTCTC CTCTCAGGACTATCAGTTCAAAGAATCATCTCAGAATTGAAGAAAATTACCAGTCCTGTT GAGGAAAAACTTGTGAATGTCATATACAAAATTTATTTTAGAATTTTGTTTCCTCACACT TATACTGGTGAATTTTCAACTGATAAGGACTGTAGGGAGCTTTTGATACAACACCGTTTG AAAATTGAAAGGGAAATATCACTACACCTTTAAAGTGGAAGTTTCGTCGTGCGTTGTCCC CCTCCCCATGTGCCCACCGAGCGTCATACAGTCCCCGCGTGTGCCAGCAAATAATCCAAA AATAGAGCACGCTCGTTGGGGTTCAAACCATGGTCGCATGGAACAAGCGCTTGCCTCATA ACCACTTGAGCTCGTGTTGGTTTGTGCTATATAAAGGGATGTCTATCTGTATGATATATA GAAACCGTAGCACGAGCAACTAACTAGTATATCCCTACATGTAAAGATTTGCTATTAGTT AGTGCTAATAGAAAATTTTCTCCTGAAGTGCCTGAAAATAATATATAAAATTGATGTTTG CCTTGATCATTGTTTGTGATATTGCGGTTTATCTACAGGGTGACGATGACAATTCTTCAA GCAGAAAATGTAACACATCATCATTAAAAATGTTACTAGAGAAGGAGATGTCTAAAGAAG CAGAGTCAAAGAGAAGACATCCAAGTGTCATTGCCAGATTAATGGGTCTTGAGGAGGATT TACCTACTAAAGAACCAACTGTACACCATACCGTAAGTGACTTGAGTAGAGATTTGAATG CCACAAACAACACCTTACAGGGAAAAGAACACCATCACTTTATAATGTCGAAGACACAAA ACTACCAATCCTGTCATGAAAAAATCGAATACAATGATGTTTTTGAAGTATCTGAAGGAC AACCGGGAACAGACTGTTTTCATGATAGAACTTCACAGAAAGGATGGTCTTCCGAGAACA AGAGTGAGCAATTCAATATTGCACGAGACAAGATCATGGAACCAGAACAGTTAGCTATTG AAGAGAAGCTCCTTTGTACAAAGGAGTTGCCTGAAGCTCTTGTTTTTCCATGTTCAAATA GAGATTTATTTCTTGAATTTCCTGAAGAACATAACCCCACATTCTCAAGACAGTCGAGTG GGCTTCATGCAAACCAAGCACCGCCTCAAACAAAACGCATTACAGTGCTGAAACCAATTA GATCTGTTGATAGTGATGGCATAAGACGACCCAGAGCAGAAATTGGTAAGCAAAATGTAT TGAAGATGAGAAGGTTCCATCAGATTCCTAGTTCAAAGGAAGAGATACCTTCCCAACCAA GTAGAATAATCCTTTTGAGGCCTACCCCAGGGAAGCCAGGTATATCAAAGGCAAAGCTGA CATCCAGGGCAACTTCATTTCAGTTACCTAACCGTAACAGTCTCAATGGATCATTAGATG ATAACCAGGCATCCATAGGATCTGCAGGACTAGTGCATGGTATGATGCAGTGCCGGCAAG ATGGATGTCACCAAAGAGATGATTCTTTATTATCTTCTGCATACTCAAATGGATATGGGG GAGATGAAAGCTCATTCAGTGATTCAGAAGTTGATTATACCAGTGGCTCTGAAATCAACT ATATTGAAGATTGTGATACCCTCAGTGACTCCGAGGGAGGTAGCCCTCTGTCAAGACACT CATGGAATTACATAAGAAGATATGAAGGTCAATGCTCAAGTTCATCCTTTAGCAAAATAT CCCACTTTTCTGAGTCGTCAGTTGTAACGGAGGCCAAAAAACAGATTTCAGAGCGATGGT CAATGGTTACATGCAATGAGATGAGTCAAGTGCAACTGTCGAGAAGAAAATGCACGTTAG GTGAGATGCTCTCCATTAAGGAAGCAAAGGAAGACGAGGCCACCACTGGGATGTTTTATG TTTCCAGCAACCAGTCATGTGGCCTGGAGAATGAACTGACTACACGTTCTACAAATGTAA CTACTTCTAGAAAAAATGGTGACAATGGGGAGAGATCTTCGAAATTGCCAAGATCAAAAT CTGTTCCAGTGATTTCATCCACGTCTGATAACATGACGGTGAACATGCAAGCTTCAAATC CTGAGAGCTGCAAACTTAAAGTGGCTGTTGTGTCAAATAAAGGAAAATCAGCTTTCAAGG GAAGAGTTTCAGATTTTTTCTTGTCTAAAAGTAAAAGGCCAAGAAGGCAGATGCCTGCTT ATCATCAATCTGATTGTATTGCTGAGGGGCTTGAAGGCTGTATTACTCATAATAGACAGG ACTGCAATCATAAAATGGATGCCATCGAGAAAGCGATGCATTACGATGATGAATTCAATA GTTTTTCGACACGAATATCAACTAGCATACCAGATAGAACAACTTCTGGTGCATCTGTTT CATTGGGCAGTTCAACCGGAAACCTGGATAAACTAGGAGTAAACAAATGCCTAAATGGTA ACCGTGATCAACCAAGCCCTACCTCAGTTCTTGATGCACCCTCTGAAGATAGCAGTTGTA ATGAGCCTGAAACACTTGGAACAACTACTTCCAAGAATGCGATCTGGTTTATATGTTGAT TGCGTCTGATTTATAAGCAGTATCAAGATCTTCAGCAATTGAAACTGTGGCCCGTTTCTT GTCATTGGATGACACCGCCTCAGAGTCACAGTCACTTTGTAACCCAAGACCGAGTTCTCT TCTCCCTGATGCAGATGATGATGAGTCAGAGTGCCACGTCCTTGTGCAAAATATAATGTC ATCAGCTGGATTAGGCACTTCACAGTCACGTATGGTTTTCGCCGGCTGGCATTTACCTGA TCACCCTCTTGACCCGGTGCTGCGTAACAAAGTATCTCAGCTGCAGGAGAAAAGTTCATA CAGAAGGCTTCTTTTTGACTGCGTGAATGTTGCTCTAATTGAGATCGGTGAGAACGCCTT ACTGAGCGCCCTCCCATGGAGTAAAAGAAGTTCCAGAACATGGAGGGGCACCTCATCTCC TGATCTGGGGGTGGAGGTCTGGAGTATTCTCAAGGACTGGATACACGGGGCACGGATGTT TGTGGTGAGCAAGAGAGATAATGCTGGGATCATACTGGACAGAATTGTGAAGCAGGAGGT CGAAGCAAGAGGGTGGGTGAAACTGATGATGGCGCAGGTGGTTGTCATCACCGAGGAGCT CGAAGGGGGAGTAATGGAGGAGCTGGTTGAAGAAGCGGTGCTGGATTTTTACAGTCTGTT TTCAGTGGTGAGATATCGATTGTGACTGGTAAAACTTTCCACGGAGCAGCTGGTTTGTGT ATGCTCTTGTTTTGCAGCTACACCGGTCGTTCGCCGCCGTATCCATTCCCCCCTGGTTCT CTTTCTAGCTGGTTCTGCTTCTTGTATTACAAAGTTTGTATAAACTTCTGGTAGATGAGA ACATGGTAATTGTGCAGTTCATGAGAAGTTTTGTAGGCAAAATAAAGTGAGCCAAACTTT CCATG