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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017208_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:188981065:188985296:1 gene:Zm00001d017208 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tic20-like protein

Sequence

ATGAACTCAAAGAAATTGTCAGCCATGGTGTTAGCTGGTGTGGATTCTCACCGTTATGCT
ACATCTTCAGCATTTGCAAAGTATAATCCTGTCAAGAACATCAAGCCACTACTGTCATCC
CCAAAGTTGAAACCAAGAACTAAAGTTGGTTGCCAAGCATCCTTGTCGTCATTCAGCTAC
CCTGAGTTATCTTTCAAACCGAAATGGTGGTGGAGGACCCTAGCATGTGTACCTTATCTT
CTGCCACTGCACAACATGTGGGGGCATGCAGATGCTATCTATCAGCTTCATCCATACTTG
CAAAGATTTAGCCTGCCTTACGCTTTCATCGATACAATGGCTCTGCTCCCTGGGTGGCTT
TTCCTGGCGATCTTCATGACTATATACTTCTTTGTTGTGAGGCGGAAGTGGTCGCCACAC
TTCTTGCGCTTCCACATCATATTGGCTATCCTGCTTGACACGGGCTCACAAGCTCTGGCC
ACTGCCTGCAACTGGAACCCAAGCATTGCTTTTCAGGGCAAACAAATGGCACATTTCTGG
ATGGCAATGGCCTTCATTCAAATCTTCACGGTTGCCGAGTGTGTAAGGTGTGCACTTTCA
GGGGTGTATGCAAATGTTCCATTTATATCTCATGCAGCACTCATCCATTCAGATCTTAAC
CTGTTTAGGTAG

Peptide Sequence

PEP ID

Zm00001d017208_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:188981065:188985296:1 gene:Zm00001d017208 transcript:Zm00001d017208_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tic20-like protein

Sequence

MNSKKLSAMVLAGVDSHRYATSSAFAKYNPVKNIKPLLSSPKLKPRTKVGCQASLSSFSY
PELSFKPKWWWRTLACVPYLLPLHNMWGHADAIYQLHPYLQRFSLPYAFIDTMALLPGWL
FLAIFMTIYFFVVRRKWSPHFLRFHIILAILLDTGSQALATACNWNPSIAFQGKQMAHFW
MAMAFIQIFTVAECVRCALSGVYANVPFISHAALIHSDLNLFR

Transcript Sequence

Transcript ID

Zm00001d017208_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:188981065:188985296:1 gene:Zm00001d017208 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tic20-like protein

Sequence

ATGAACTCAAAGAAATTGTCAGCCATGGTGTTAGCTGGTGTGGATTCTCACCGTTATGCT
ACATCTTCAGCATTTGCAAAGTATAATCCTGTCAAGAACATCAAGCCACTACTGTCATCC
CCAAAGTTGAAACCAAGAACTAAAGTTGGTTGCCAAGCATCCTTGTCGTCATTCAGCTAC
CCTGAGTTATCTTTCAAACCGAAATGGTGGTGGAGGACCCTAGCATGTGTACCTTATCTT
CTGCCACTGCACAACATGTGGGGGCATGCAGATGCTATCTATCAGCTTCATCCATACTTG
CAAAGATTTAGCCTGCCTTACGCTTTCATCGATACAATGGCTCTGCTCCCTGGGTGGCTT
TTCCTGGCGATCTTCATGACTATATACTTCTTTGTTGTGAGGCGGAAGTGGTCGCCACAC
TTCTTGCGCTTCCACATCATATTGGCTATCCTGCTTGACACGGGCTCACAAGCTCTGGCC
ACTGCCTGCAACTGGAACCCAAGCATTGCTTTTCAGGGCAAACAAATGGCACATTTCTGG
ATGGCAATGGCCTTCATTCAAATCTTCACGGTTGCCGAGTGTGTAAGGTGTGCACTTTCA
GGGGTGTATGCAAATGTTCCATTTATATCTCATGCAGCACTCATCCATTCAGATCTTAAC
CTGTTTAGGTAGTTGATCATTGCAAAGTGCATTTTTGGAATTAAGAGGTACTGAATTGGT
TAAACTGTCGAGTAGAGGACTAATCAGACTATCAGAGAGGAAATTAATGTAACCATTGCT
CTTCACTGCATTGTTGCCAGTACTGTTGATTTCATGTCTCTGAATTTAAGCTTGAGTGGC
ACCAGGCTTTGTGCTTTCTTCTTTCCCCACCCTCTTTAGCGGCACAAACGTTGAGAACTT
ATTTATATGGATAAATATTTATCGATTTAATAGTGTGG