Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017203_T021
CDS Infomation

cds chromosome:B73_RefGen_v4:5:188722248:188731050:-1 gene:Zm00001d017203 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory subunit

Sequence

ATGGGTGGTGTCTGCTCAAGGAAGAGAAGCCAATTGGTGGATGAAGGTGACGCTCTCCAG
ACATCCCCAAGGTTCTCAAAGACCAGCAGCTTAAAATGGCTGTTGCTTACACTGCCTCGC
AGCAGTTCTGATGTTTCCGGGAAGGGACAGGGAAATGAACCTGGGCGGTGCCCGTCCCTC
ATGGAGCTTTGTGTGGCTAGAGTTTGCCAGGATATCGACAGGTATTCTACTTTTGCAATG
CTGCCAAGGGATCTCAGCCAGCAGATTTTCAATGAATTAGTAAATTCAAACCGTCTTACA
GAGGCATCACTTCAAGTTTTTAGGGATTGTGCTCTGCAGGACATTGGCTTAGGGGAGTAC
CCTGGAGTAAAGGATGCTTGGATGGAAGTAGTGGCATCTCAAAAGCAGTCATTGTTGTCG
GTTGATATTTCTTGCTCTGAAGTAGCTGATAGTGGGATAGATCTTCTTAGAGATTGCTCA
AGCATGCAAAGTTTGGCATGTAATTACTGTGATCAAATATCCGAAAGTGGTCTGGGAGTA
CTGTCAGGATTGTCAAACCTATCTTCTTTAAGCTTCAAGCGAAGTAATGCTGTTACTGCT
GAAGGAATGAGAGCCTTTGCAAATTTAGTTAACTTACTAAATCTCGACCTTGAAGGTTGC
CTAAAGATTCATGGTGGCCTTATTCATTTAAAAGATCTGACAAAGCTCGAGTCATTGAAT
ATGAGATATTGCAATTATATTGCGGATTCAGATATCAAATATTTAACAGATCTGACAAAT
TTGAAGGACCTTCAATTGTCATGTTGTAAGATCACAGATCTGGGGGTGTCGTATATCAGA
GGTAAACAGTATCAGAAGTTTATTTATTTGTTTGGAGGCTTGCAGAAGCTCACTCACTTG
AACCTAGAGGGCTGCCCAGTGACTGCTGCTTGTTTGGAAGCTATTTCAGGATTGTCTTCA
TTGGTATTGTTGAACTTGAACCGTTGTGGTATATACGATGATGGCTGTGAAAACTTTGAA
GGTCTTAAAAGGTTGAAGGTTTTAAACTTGGGGTTTAACTATATTACAGATGCTTGTTTG
GTGCATCTGAAAGAATTAATCAGTTTGGAGTCTTTGAACTTGGATTCGTGCAAGATTGGA
GATGATGGTCTATCACATCTGAAAGGTCTTGTGCTACTGCAAAGCTTGGAGCTTTCTGAT
ACTGAAGTTGGAAACAATGGACTCCAGCATCTATCTGGTCTTCGTAATCTGCAAAGTATT
AATCTCTCATTTACTTTGGTCACGGACATTGGTGTGAAGAAGATCTCTGTGTTGAATTCG
CTGAAGTCAGTTAACCTTGACAATCGCCAAATTACTGATGTTGGCCTGGCAGCACTTATA
AGTCTCACTAGGCTGACTCATCTTGACCTTTTTGGAGCTTGCATAACTGACAATGGCACA
AATTGCTTCAGATATAACTTCGGGGAAGCATTGTTTGACATTAGTTATCTTTTCTGCAAG
CAGACCACATCATTTGACACAATTTATGTTGTTGCAGATTTTAAGAATCTTGTTTCTCTT
GAAGTCTGTGGTGGGTTCGTTACTGATGCTGGAGTGAAGAACATCAAGGATCTGAAGGCC
CTGACGTTGCTGAATCTTTCTCAAAATGCTAATCTGACAGACAAAACCTTGGAGCTGATC
TCTGGTATTGTTCTTCCATGTTGGAATAAGTGTACTTCTTTTTTACAGTTAAAATCTCAT
GGCCATCTGGTTTACAGGCCTGACTGCTTTGATCAACTTGAACGTGTCAAACTCACGGGT
GTCCAATGCTGGTCTCAAACACCTGAATGA

Peptide Sequence

PEP ID

Zm00001d017203_P021
PEP Infomation

pep chromosome:B73_RefGen_v4:5:188722248:188731050:-1 gene:Zm00001d017203 transcript:Zm00001d017203_T021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory subunit

Sequence

MGGVCSRKRSQLVDEGDALQTSPRFSKTSSLKWLLLTLPRSSSDVSGKGQGNEPGRCPSL
MELCVARVCQDIDRYSTFAMLPRDLSQQIFNELVNSNRLTEASLQVFRDCALQDIGLGEY
PGVKDAWMEVVASQKQSLLSVDISCSEVADSGIDLLRDCSSMQSLACNYCDQISESGLGV
LSGLSNLSSLSFKRSNAVTAEGMRAFANLVNLLNLDLEGCLKIHGGLIHLKDLTKLESLN
MRYCNYIADSDIKYLTDLTNLKDLQLSCCKITDLGVSYIRGKQYQKFIYLFGGLQKLTHL
NLEGCPVTAACLEAISGLSSLVLLNLNRCGIYDDGCENFEGLKRLKVLNLGFNYITDACL
VHLKELISLESLNLDSCKIGDDGLSHLKGLVLLQSLELSDTEVGNNGLQHLSGLRNLQSI
NLSFTLVTDIGVKKISVLNSLKSVNLDNRQITDVGLAALISLTRLTHLDLFGACITDNGT
NCFRYNFGEALFDISYLFCKQTTSFDTIYVVADFKNLVSLEVCGGFVTDAGVKNIKDLKA
LTLLNLSQNANLTDKTLELISGIVLPCWNKCTSFLQLKSHGHLVYRPDCFDQLERVKLTG
VQCWSQTPE

Transcript Sequence

Transcript ID

Zm00001d017203_T021
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:188722248:188731050:-1 gene:Zm00001d017203 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory subunit

Sequence

ACAGCCCTGTTCGCCTCTCTCCTTTCCACAAGCCGCTCTTGTGGGTTGTGAGTGACACCT
TTCGGTAGAGGTAGAAGTGTAGAACCCACCCATCAGCGGAACTGGTCCGTCGGCCCATGG
GACACGTGGAGCTCTGTCGCGGCGCCGGCTCTCTCCCTCACCACTTGCATTTCCTCCCTT
CCTTTTTCCGCCTCCGTTTTCCTCCCCCTCCGACACCAGCCCACCACGCGAGAACTCGTC
AGATATTTATGAGCGCAGCCGCGGGTTAACCTTCCCTTCTCGCTGCCGTGCTCCTGCTCG
TGCGCGCGTTCGCAATCGTAGCGCTGGGGTTGAGCCGCGAGTGGATAAACCCTAGCCGGT
GGTGTAGCTGGGTTGGTGGCTTTGATGCCGGCGACGGCCCGCTTGTCCCCGGAATGGAGT
GAGGTGACGAAGGCTGCCATGGGCTCTAACTATGCCACGATTGGATTATAGGATAGTAGC
TGGCAGCTACCAGTTTCCTAGAACCAATTTGTGGATAGCGAGAGGAGTGACTGTTGTTCA
GTACTTTCACCTCGATCATGGGTGGTGTCTGCTCAAGGAAGAGAAGCCAATTGGTGGATG
AAGGTGACGCTCTCCAGACATCCCCAAGGTTCTCAAAGACCAGCAGCTTAAAATGGCTGT
TGCTTACACTGCCTCGCAGCAGTTCTGATGTTTCCGGGAAGGGACAGGGAAATGAACCTG
GGCGGTGCCCGTCCCTCATGGAGCTTTGTGTGGCTAGAGTTTGCCAGGATATCGACAGGT
ATTCTACTTTTGCAATGCTGCCAAGGGATCTCAGCCAGCAGATTTTCAATGAATTAGTAA
ATTCAAACCGTCTTACAGAGGCATCACTTCAAGTTTTTAGGGATTGTGCTCTGCAGGACA
TTGGCTTAGGGGAGTACCCTGGAGTAAAGGATGCTTGGATGGAAGTAGTGGCATCTCAAA
AGCAGTCATTGTTGTCGGTTGATATTTCTTGCTCTGAAGTAGCTGATAGTGGGATAGATC
TTCTTAGAGATTGCTCAAGCATGCAAAGTTTGGCATGTAATTACTGTGATCAAATATCCG
AAAGTGGTCTGGGAGTACTGTCAGGATTGTCAAACCTATCTTCTTTAAGCTTCAAGCGAA
GTAATGCTGTTACTGCTGAAGGAATGAGAGCCTTTGCAAATTTAGTTAACTTACTAAATC
TCGACCTTGAAGGTTGCCTAAAGATTCATGGTGGCCTTATTCATTTAAAAGATCTGACAA
AGCTCGAGTCATTGAATATGAGATATTGCAATTATATTGCGGATTCAGATATCAAATATT
TAACAGATCTGACAAATTTGAAGGACCTTCAATTGTCATGTTGTAAGATCACAGATCTGG
GGGTGTCGTATATCAGAGGTAAACAGTATCAGAAGTTTATTTATTTGTTTGGAGGCTTGC
AGAAGCTCACTCACTTGAACCTAGAGGGCTGCCCAGTGACTGCTGCTTGTTTGGAAGCTA
TTTCAGGATTGTCTTCATTGGTATTGTTGAACTTGAACCGTTGTGGTATATACGATGATG
GCTGTGAAAACTTTGAAGGTCTTAAAAGGTTGAAGGTTTTAAACTTGGGGTTTAACTATA
TTACAGATGCTTGTTTGGTGCATCTGAAAGAATTAATCAGTTTGGAGTCTTTGAACTTGG
ATTCGTGCAAGATTGGAGATGATGGTCTATCACATCTGAAAGGTCTTGTGCTACTGCAAA
GCTTGGAGCTTTCTGATACTGAAGTTGGAAACAATGGACTCCAGCATCTATCTGGTCTTC
GTAATCTGCAAAGTATTAATCTCTCATTTACTTTGGTCACGGACATTGGTGTGAAGAAGA
TCTCTGTGTTGAATTCGCTGAAGTCAGTTAACCTTGACAATCGCCAAATTACTGATGTTG
GCCTGGCAGCACTTATAAGTCTCACTAGGCTGACTCATCTTGACCTTTTTGGAGCTTGCA
TAACTGACAATGGCACAAATTGCTTCAGATATAACTTCGGGGAAGCATTGTTTGACATTA
GTTATCTTTTCTGCAAGCAGACCACATCATTTGACACAATTTATGTTGTTGCAGATTTTA
AGAATCTTGTTTCTCTTGAAGTCTGTGGTGGGTTCGTTACTGATGCTGGAGTGAAGAACA
TCAAGGATCTGAAGGCCCTGACGTTGCTGAATCTTTCTCAAAATGCTAATCTGACAGACA
AAACCTTGGAGCTGATCTCTGGTATTGTTCTTCCATGTTGGAATAAGTGTACTTCTTTTT
TACAGTTAAAATCTCATGGCCATCTGGTTTACAGGCCTGACTGCTTTGATCAACTTGAAC
GTGTCAAACTCACGGGTGTCCAATGCTGGTCTCAAACACCTGAATGA