Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017166_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:187570389:187600485:-1 gene:Zm00001d017166 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence	ATGGCTGCAAGAGCAATCACGAGGAGAAGGAAGTATCTTTTCGACCATGTTAAAACACCT AACCTCTCATCTTCATCCTCTACTTTCCAACATGGAAGAATTGGTTCTGAAGATGAGCCA AAAATAACACTACTGTTTCTGGAGCAAAGCTCTAGGGATTCAAGATCTGAGAAGGAGCAA TACTGTGTGAATTTGACTAATAGGAATTTGGCAGGTATTGCTAATAGATTTCTGCGACGT CCAGCTCATGGGATATCTCTTTCATATTATGGAATTGGAAAGAATGACTTTGGGTTGCCA CTGGGAGCTAGATCTATGCTGCAGTCAGTTCGTGCATCATCAACTGCAACCGCAGGGCAA CCTAAGTTGGATATTGATGACGAACAGAGTGGGGATCAGAAGCAAAATAGAAAGAAAAAA GAGACATCCCCAGAGGAATGTGATCAGGCTGTGGAAGGCCTAAGCACTGCAAAAGCTAAA GCCAAAGCTAAACAGGTCCAAGAATCTCTCAAGGCTAGCCAATCGGCCATGCAGAAATTC TGGGCAAGGCTTTTGGGTATTGGTCCTGCTCTGCGAGCTGTGGCTTCAATGAGCAGGGCT GATTGGGCTGCAAAGCTTAAGCATTGGAAGGCTGAATTTGTTACTACACTGCAGCATTAC TGGTTAGGGACAAAGCTACTATGGGCAGATGTTAGAATCTCATCAAGATTACTGGTGAAA CTTGCTGGTGGAAAAAGCCTTTCTAGAAGAGAGAGGCAACAGCTGACACGCACAACAGCT GATATCTTCAGGCTGGTACCATTTGCTGTGTTCATCGTTGTTCCTTTCATGGAGTTCTTA CTGCCAGTGTTCCTGAAGTTATTTCCAAACATGCTTCCATCAACTTTCCAAGACAAAATG AAAGAAGAGGAAGCATTGAAGAGGAAACTAAAAGCAAGGATGGAATATGCAAAGTTTTTG CAAGATACAGCAAAAGAAATGGCAAAGGAAGTCCAAACATCACGTAGTGGGGATATAAAA CAAACTGCTGAAGATCTGGACGAGTTTTTGAACAAGGTTAGGAGAGGTGAACGGGTCTCC AATGACGAAATCTTGAGCTTTGCGAAGCTTTTCAATGATGAACTTACTTTGGATAACATG AGCATATCACGCTTGGTAAATATGTGCAAATATATGGGTATCCGGCCTTTTGGTACAGAT CACTACTTGAGGTTCATGCTTCGCAAAAAACTGCAAGACATTAAGAATGATGATAAGATG ATTCAAGCTGAGGGTGTTGAATCTCTTTCTGAAGAGGAGCTTCGGCAAGCCTGTCGGGAA CGTGGTCACCTAGGTCTACTGTCAACTGAAGAGATGAGACAGCAGCTCCGAGACTGGTTG GATCTCTCATTAAATCATGCAGTGCCATCTTCACTTCTCATACTTTCAAGAGCTTTTACT GTATCTGGGAAAGTGAAACCTGAGGAAGCTGTTGTAGCAACACTATCTTCACTACCGGAT GAAGTTGTGGATACAGTTGGAACAGTACTGCCATCTGAAGATTCAGTTTCTGAGAGGAGG AGAAAACTTGAATTTCTTGAGATGCAAGAAGAACTTATCAAGGAGGAAGAGAAAAGGAAG GAGAAAGAAGAAAAAGCAAAACAAGAGGAAGAGGAAAAGGCAAAGCTCAAAGAAACGAAG GGTTCTGCTGAAGATTTAGCTTTGAAAGAAATGATTGAGGCTACTGCTAGGGAAGAGGAA CTGCGAAAGGCAAAACAACACGACAGGGAAAAACTCTGTAATATCGGCCGAGCATTGGCA GTGCTCGCATCTGCATCATCTGTAAGCAAGGAGCGTCAGGAGTTCTTGGGACTTGTCAAC AAGGAGATAGAACTATACAACTCAATGCTTGAAAAGGAGGGTGCAGAAGAAGCTAAGAGA GCATACATAGCTGCTAGAGAGGAATCAGACCATCATGCTGAGGCTGCTGCAGAAGAAAAA ATTTCATCAGCACTTATTGAGAAGGTTGATGCTATGCTCCAAGAATTAGAAAAGGAGATT GATGATGTGGATGCACAAATTGGAAATCGTTGGCAACTGCTTGATAAGGACCATGATGGC AAAGTGACCCCTGAAGAGGTGGCGGCGGCGGCAGCTTATCTCAAGGACACCATAGGGAAA GAAGGCGTGCAAGAGCTCATCAGCAACCTTTCTAAAGACACAGAAGGAAAAATCCTTGTT GAAGATATTGTGAAGCTAGCATCCCAAACAGAAAACAATGAAGAGGAAGAGGAAGCACGG TAG

Peptide Sequence

PEP ID	Zm00001d017166_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:187570389:187600485:-1 gene:Zm00001d017166 transcript:Zm00001d017166_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence	MAARAITRRRKYLFDHVKTPNLSSSSSTFQHGRIGSEDEPKITLLFLEQSSRDSRSEKEQ YCVNLTNRNLAGIANRFLRRPAHGISLSYYGIGKNDFGLPLGARSMLQSVRASSTATAGQ PKLDIDDEQSGDQKQNRKKKETSPEECDQAVEGLSTAKAKAKAKQVQESLKASQSAMQKF WARLLGIGPALRAVASMSRADWAAKLKHWKAEFVTTLQHYWLGTKLLWADVRISSRLLVK LAGGKSLSRRERQQLTRTTADIFRLVPFAVFIVVPFMEFLLPVFLKLFPNMLPSTFQDKM KEEEALKRKLKARMEYAKFLQDTAKEMAKEVQTSRSGDIKQTAEDLDEFLNKVRRGERVS NDEILSFAKLFNDELTLDNMSISRLVNMCKYMGIRPFGTDHYLRFMLRKKLQDIKNDDKM IQAEGVESLSEEELRQACRERGHLGLLSTEEMRQQLRDWLDLSLNHAVPSSLLILSRAFT VSGKVKPEEAVVATLSSLPDEVVDTVGTVLPSEDSVSERRRKLEFLEMQEELIKEEEKRK EKEEKAKQEEEEKAKLKETKGSAEDLALKEMIEATAREEELRKAKQHDREKLCNIGRALA VLASASSVSKERQEFLGLVNKEIELYNSMLEKEGAEEAKRAYIAAREESDHHAEAAAEEK ISSALIEKVDAMLQELEKEIDDVDAQIGNRWQLLDKDHDGKVTPEEVAAAAAYLKDTIGK EGVQELISNLSKDTEGKILVEDIVKLASQTENNEEEEEAR

Transcript Sequence

Transcript ID	Zm00001d017166_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:187570389:187600485:-1 gene:Zm00001d017166 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence	ACGTTTCTTTCTTCCTCCACACGCCTGCTTGTTCACCTCCATGGCTGATGGCTCCATCTC CTCCTGTCCCTAACCCCCTCCGGCCCTCCCCTCCTCCAAAGCCCTAAACCCCACGTAGCT CGGTGTGTCAGTCCACTCGCCCGCCCGGTCGGCGCCGCACCCATCTTTCGGATTCTACCC TAAAGGCATGACCTTGGTCTTCCAATCTGGAAATTGAGTAGCAATCAAGTATGGCTGCAA GAGCAATCACGAGGAGAAGGAAGTATCTTTTCGACCATGTTAAAACACCTAACCTCTCAT CTTCATCCTCTACTTTCCAACATGGAAGAATTGGTTCTGAAGATGAGCCAAAAATAACAC TACTGTTTCTGGAGCAAAGCTCTAGGGATTCAAGATCTGAGAAGGAGCAATACTGTGTGA ATTTGACTAATAGGAATTTGGCAGGTATTGCTAATAGATTTCTGCGACGTCCAGCTCATG GGATATCTCTTTCATATTATGGAATTGGAAAGAATGACTTTGGGTTGCCACTGGGAGCTA GATCTATGCTGCAGTCAGTTCGTGCATCATCAACTGCAACCGCAGGGCAACCTAAGTTGG ATATTGATGACGAACAGAGTGGGGATCAGAAGCAAAATAGAAAGAAAAAAGAGACATCCC CAGAGGAATGTGATCAGGCTGTGGAAGGCCTAAGCACTGCAAAAGCTAAAGCCAAAGCTA AACAGGTCCAAGAATCTCTCAAGGCTAGCCAATCGGCCATGCAGAAATTCTGGGCAAGGC TTTTGGGTATTGGTCCTGCTCTGCGAGCTGTGGCTTCAATGAGCAGGGCTGATTGGGCTG CAAAGCTTAAGCATTGGAAGGCTGAATTTGTTACTACACTGCAGCATTACTGGTTAGGGA CAAAGCTACTATGGGCAGATGTTAGAATCTCATCAAGATTACTGGTGAAACTTGCTGGTG GAAAAAGCCTTTCTAGAAGAGAGAGGCAACAGCTGACACGCACAACAGCTGATATCTTCA GGCTGGTACCATTTGCTGTGTTCATCGTTGTTCCTTTCATGGAGTTCTTACTGCCAGTGT TCCTGAAGTTATTTCCAAACATGCTTCCATCAACTTTCCAAGACAAAATGAAAGAAGAGG AAGCATTGAAGAGGAAACTAAAAGCAAGGATGGAATATGCAAAGTTTTTGCAAGATACAG CAAAAGAAATGGCAAAGGAAGTCCAAACATCACGTAGTGGGGATATAAAACAAACTGCTG AAGATCTGGACGAGTTTTTGAACAAGGTTAGGAGAGGTGAACGGGTCTCCAATGACGAAA TCTTGAGCTTTGCGAAGCTTTTCAATGATGAACTTACTTTGGATAACATGAGCATATCAC GCTTGGTAAATATGTGCAAATATATGGGTATCCGGCCTTTTGGTACAGATCACTACTTGA GGTTCATGCTTCGCAAAAAACTGCAAGACATTAAGAATGATGATAAGATGATTCAAGCTG AGGGTGTTGAATCTCTTTCTGAAGAGGAGCTTCGGCAAGCCTGTCGGGAACGTGGTCACC TAGGTCTACTGTCAACTGAAGAGATGAGACAGCAGCTCCGAGACTGGTTGGATCTCTCAT TAAATCATGCAGTGCCATCTTCACTTCTCATACTTTCAAGAGCTTTTACTGTATCTGGGA AAGTGAAACCTGAGGAAGCTGTTGTAGCAACACTATCTTCACTACCGGATGAAGTTGTGG ATACAGTTGGAACAGTACTGCCATCTGAAGATTCAGTTTCTGAGAGGAGGAGAAAACTTG AATTTCTTGAGATGCAAGAAGAACTTATCAAGGAGGAAGAGAAAAGGAAGGAGAAAGAAG AAAAAGCAAAACAAGAGGAAGAGGAAAAGGCAAAGCTCAAAGAAACGAAGGGTTCTGCTG AAGATTTAGCTTTGAAAGAAATGATTGAGGCTACTGCTAGGGAAGAGGAACTGCGAAAGG CAAAACAACACGACAGGGAAAAACTCTGTAATATCGGCCGAGCATTGGCAGTGCTCGCAT CTGCATCATCTGTAAGCAAGGAGCGTCAGGAGTTCTTGGGACTTGTCAACAAGGAGATAG AACTATACAACTCAATGCTTGAAAAGGAGGGTGCAGAAGAAGCTAAGAGAGCATACATAG CTGCTAGAGAGGAATCAGACCATCATGCTGAGGCTGCTGCAGAAGAAAAAATTTCATCAG CACTTATTGAGAAGGTTGATGCTATGCTCCAAGAATTAGAAAAGGAGATTGATGATGTGG ATGCACAAATTGGAAATCGTTGGCAACTGCTTGATAAGGACCATGATGGCAAAGTGACCC CTGAAGAGGTGGCGGCGGCGGCAGCTTATCTCAAGGACACCATAGGGAAAGAAGGCGTGC AAGAGCTCATCAGCAACCTTTCTAAAGACACAGAAGGAAAAATCCTTGTTGAAGATATTG TGAAGCTAGCATCCCAAACAGAAAACAATGAAGAGGAAGAGGAAGCACGGTAGATGGGAG AGTATATGGAAACATCACACTCGTTCAGCAGTCAAAACTCATGTATTGAAAGGCAATACG TCCATTTCTTGTGTCTCTTGACTGACTTTGATAGTGACTTCCAATTAGCAAGGTAGATTT TCTGTAGAAAGGCTCATGCTGACATGCATTTAGTTAGCCGCCGTGTTGTGATTTGGCAGG TAAAATTGCAACCAAAATTTAGACCGGTTGCATGGACGTGGATAATACAGATCAATTGTA TTTGTTACTACTATGCAATCCCGAAATATTGGATCTGTTTCAAATTCTCAAGTAATCATT GATGGATGCTATTTATTGAC