Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017165_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:187559845:187568665:1 gene:Zm00001d017165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FAR1-like-transcription factor 9 description:Protein FAR1-RELATED SEQUENCE 6
Sequence	ATGGTGTTCAATAATCACACAGAAGTCAACCGATTCTACCGCCGGTATGCCCGCCGTGTT GGCTTTGGTGTCTCAGTAAGGAGGTCTTCGTTCTCACGAGAAGGGACCTGCTTATATCTG GAGCTTATGTGCTGCAAAGGAGGGAGGCCACGTTATGAGCCGAAGTTTCGGAAAAGGGCT TCATCGACCACTAACTGCCCAGCCAAAGTACGAGTGAAGTTGTGGGGAGATAAATTGTTG CATATAGAGTTGGCGATCCTTGATCATAATCACCCAGTGAGCCCTGCAATGGCAAGGTTT TTGAACTCTTATAAGCAGCTCTCTGGCCCTGCAAAGAGGCGGTTGCGTATGGGTGGCCCT GGGACTATGCCTGTTGAAGAGTCAAGCAAGATGCCCATGGATAAGCTGGGGGAGCTTGAG CAGCTTCTGTTTGGTGAGAGCAAGCACAACAGCTTTGTGGAGAGGGGTCGTTTGAAGCTC CAACCTGGAGATTCGGAGGCCCTTCGGCTTTTCTTCACTCGGATGCAGGCCAAAAATGCC AACTTTTTTAATGTCATTGACCTGGACGATGAAGGCTGTACCAGGAATGTTTTCTGGGCA GATGCACGGTCTAGAGCCATGTGTGAGTACTATAGTGATGTCATCACACTTGATACATCA TATGTGGCTAGTAAATATGATATGCCTCTTGCAACATTTATTGGGGTGAATCATCATGGA CAATCTGTCTTGATGGGGTGTGCCCTGCTTTCTGATGAAACAGCAGAAACCTATTCATGG CTACTTAAGTCTTGGATAGCATGTATGTACGGCAATCTTCCAAAGGCTATTGTCACTGAC TATTGTAGGGGCATCCAAAGTGCTGTAGCTGAGATTATTCCGGGAGTCCGTCATAGAATG TGTTTGTTTCAGATAATGAGGAAGGCCGCAGAACGTTTAGGTGGGCTGTCAGAGTACAGA GCTATCAACAAGGCGATGCATAAGGCTGTATATGATTCTTTAACCATTGATGAGTTTGAA GAAGAATGGAATACTTTAATTACATATAGTGGGCTTCAGAGCAATGACTGGTTAAGATCA CTTTATGAATGTCGATCTTCATGGGTTCCTGTTTTTATTAAAGATACATTTTGGGCAGGA ATGTCTACTACACAAAGAAATGAAACAATCACTCCTTTTTTTGATGGATATGTTGATTTG AAAACTACCTTGAAACAATTTCTTGTCAAGTATGAGATGGCTTTGCAGAGTAAATATGAG AAGGAGGCCCAAGCAGATTTTGAGACGTTTCATAAGCAACGCCCACCGGTATCAAAATTC TATATGGAAGAGCAGCTCTCAAAAGTATACACACATAATATGTTCAAGAAGTTCCAAGAT GAGATTGAAGCCATAATGTACTGCCATGTATCTTTAATTAGTGTTGATGGGCCTGTCTCT ACATTCAATGTCAAGGAGTGCATTTTCTTTGAAGATGGTAAAAGGACTATGAGTAAAATT TTTGCAGTGACATACAAAGTGGACGAAAAGAATATTAGCTGTATATGTGGAGGTTTCCAA TTCAGTGGCATACTATGTAGGCATAGTCTCTCAATGCTCAAGTTTCAACTGGTTCGTGAA ATCCCACAACATTATATTCTTGATAGGTGGAAGAAGGATTTTCGACAGTTGCATGTGATG AGACGCCCTCCAAGCGATCTTGTTCCTAACAATCGCATGGATCGATATGACTATTTATCA ATAAGATGTTTGCAACTTGTTGACTCTGCAGTCCTATCAGATAAGTATCGCCTTGCTTTG AGGTTGGTAAGGGAGACAGAGAAATTTCTGCTAAATAGCAACACACATGATGATACACAA CCAAGGATCAAGTCTCGTGTTCCTAAAGTAAATAAACCAAATATTGTGACTGGCCAAACC ATGGTGGGTGCAGCTACTGGAAATGGAAATGATGGTCTCAAAGGACCAGAGGCTACAGCA GTCACGCAAGTACCACAATCCCAAAAGGGAGGAGCAGAAAAAGGAATAGTTCCTACTGGC TACATTGGAGTACCAGCTAATCTCCAACAATTTGTAGGCAATCAAACAGCATTTCGGCCA AGCATTGTGTACATGGTACCGAGTGGTGTTGATCCACATGCTTTTGGAAATGTTATGATG CCAGTGATGTACCAGCAGATGTTCCAGGTGCCTCCGAAGCCAAATGAGACCGTGCAGGAT ACTTCAGCCAATGGAAAAAGTAAGCGACCTCGCGGTCAGAAGCTCACAGAGACATCCCAA CAGGCAAATGGAACCCCAGCATCTGCATCTGGCTAG

Peptide Sequence

PEP ID	Zm00001d017165_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:187559845:187568665:1 gene:Zm00001d017165 transcript:Zm00001d017165_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FAR1-like-transcription factor 9 description:Protein FAR1-RELATED SEQUENCE 6
Sequence	MVFNNHTEVNRFYRRYARRVGFGVSVRRSSFSREGTCLYLELMCCKGGRPRYEPKFRKRA SSTTNCPAKVRVKLWGDKLLHIELAILDHNHPVSPAMARFLNSYKQLSGPAKRRLRMGGP GTMPVEESSKMPMDKLGELEQLLFGESKHNSFVERGRLKLQPGDSEALRLFFTRMQAKNA NFFNVIDLDDEGCTRNVFWADARSRAMCEYYSDVITLDTSYVASKYDMPLATFIGVNHHG QSVLMGCALLSDETAETYSWLLKSWIACMYGNLPKAIVTDYCRGIQSAVAEIIPGVRHRM CLFQIMRKAAERLGGLSEYRAINKAMHKAVYDSLTIDEFEEEWNTLITYSGLQSNDWLRS LYECRSSWVPVFIKDTFWAGMSTTQRNETITPFFDGYVDLKTTLKQFLVKYEMALQSKYE KEAQADFETFHKQRPPVSKFYMEEQLSKVYTHNMFKKFQDEIEAIMYCHVSLISVDGPVS TFNVKECIFFEDGKRTMSKIFAVTYKVDEKNISCICGGFQFSGILCRHSLSMLKFQLVRE IPQHYILDRWKKDFRQLHVMRRPPSDLVPNNRMDRYDYLSIRCLQLVDSAVLSDKYRLAL RLVRETEKFLLNSNTHDDTQPRIKSRVPKVNKPNIVTGQTMVGAATGNGNDGLKGPEATA VTQVPQSQKGGAEKGIVPTGYIGVPANLQQFVGNQTAFRPSIVYMVPSGVDPHAFGNVMM PVMYQQMFQVPPKPNETVQDTSANGKSKRPRGQKLTETSQQANGTPASASG

Transcript Sequence

Transcript ID	Zm00001d017165_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:187559845:187568665:1 gene:Zm00001d017165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FAR1-like-transcription factor 9 description:Protein FAR1-RELATED SEQUENCE 6
Sequence	TTTGTCACCAAACTTTGCACCCGCCTCGCCGTACCCGTCCGAAACCCTAGTCTACCTCGG CGGCGGCGGGCCCTCCGGCGATGGAGGTGGAGGAACCGCTCCCAACGTCCAAGAACCCCC GCCGTGCTCGGCGCCGGGACCTCAACGCACTGCTATGTGCGGGGAAATTTCCATTGCCTT CCTTGAATTCGATTCGAGGTGTGGGACTGCCGAGGAAGCCTTCAGAATTTCATTCTGAAG CGGGCGGGCAGGCAGTGGTTGTCATTTAGGGTTTGGATTTGATTGATTCATTTGTTTTTA ATGGGTAGCTATTTCATATTTCAACTCTATTTTCGTCAGTGGACTAGCATTTGTTTTTTC AGTAAGCGGTCTAGTGTCTAGTAATTCTGTGTTTCTGTTCATCACTTTATTTCTGTAATT CTGTATTTTCTATGTTTCAAAATGTTACTTTTCACTTCACTTCACTTTGTATTAGCTTGA AAAACTTGGATTTTTTCCAGTACTTTGCAATGCAAGTGGTTTCATGATGGAGTTCTTTTA GGATCCCACATTGGAGGAGTCCGACGGGGAGGATATTGGTGTTCCGGAAGTTGGTATGGT GTTCAATAATCACACAGAAGTCAACCGATTCTACCGCCGGTATGCCCGCCGTGTTGGCTT TGGTGTCTCAGTAAGGAGGTCTTCGTTCTCACGAGAAGGGACCTGCTTATATCTGGAGCT TATGTGCTGCAAAGGAGGGAGGCCACGTTATGAGCCGAAGTTTCGGAAAAGGGCTTCATC GACCACTAACTGCCCAGCCAAAGTACGAGTGAAGTTGTGGGGAGATAAATTGTTGCATAT AGAGTTGGCGATCCTTGATCATAATCACCCAGTGAGCCCTGCAATGGCAAGGTTTTTGAA CTCTTATAAGCAGCTCTCTGGCCCTGCAAAGAGGCGGTTGCGTATGGGTGGCCCTGGGAC TATGCCTGTTGAAGAGTCAAGCAAGATGCCCATGGATAAGCTGGGGGAGCTTGAGCAGCT TCTGTTTGGTGAGAGCAAGCACAACAGCTTTGTGGAGAGGGGTCGTTTGAAGCTCCAACC TGGAGATTCGGAGGCCCTTCGGCTTTTCTTCACTCGGATGCAGGCCAAAAATGCCAACTT TTTTAATGTCATTGACCTGGACGATGAAGGCTGTACCAGGAATGTTTTCTGGGCAGATGC ACGGTCTAGAGCCATGTGTGAGTACTATAGTGATGTCATCACACTTGATACATCATATGT GGCTAGTAAATATGATATGCCTCTTGCAACATTTATTGGGGTGAATCATCATGGACAATC TGTCTTGATGGGGTGTGCCCTGCTTTCTGATGAAACAGCAGAAACCTATTCATGGCTACT TAAGTCTTGGATAGCATGTATGTACGGCAATCTTCCAAAGGCTATTGTCACTGACTATTG TAGGGGCATCCAAAGTGCTGTAGCTGAGATTATTCCGGGAGTCCGTCATAGAATGTGTTT GTTTCAGATAATGAGGAAGGCCGCAGAACGTTTAGGTGGGCTGTCAGAGTACAGAGCTAT CAACAAGGCGATGCATAAGGCTGTATATGATTCTTTAACCATTGATGAGTTTGAAGAAGA ATGGAATACTTTAATTACATATAGTGGGCTTCAGAGCAATGACTGGTTAAGATCACTTTA TGAATGTCGATCTTCATGGGTTCCTGTTTTTATTAAAGATACATTTTGGGCAGGAATGTC TACTACACAAAGAAATGAAACAATCACTCCTTTTTTTGATGGATATGTTGATTTGAAAAC TACCTTGAAACAATTTCTTGTCAAGTATGAGATGGCTTTGCAGAGTAAATATGAGAAGGA GGCCCAAGCAGATTTTGAGACGTTTCATAAGCAACGCCCACCGGTATCAAAATTCTATAT GGAAGAGCAGCTCTCAAAAGTATACACACATAATATGTTCAAGAAGTTCCAAGATGAGAT TGAAGCCATAATGTACTGCCATGTATCTTTAATTAGTGTTGATGGGCCTGTCTCTACATT CAATGTCAAGGAGTGCATTTTCTTTGAAGATGGTAAAAGGACTATGAGTAAAATTTTTGC AGTGACATACAAAGTGGACGAAAAGAATATTAGCTGTATATGTGGAGGTTTCCAATTCAG TGGCATACTATGTAGGCATAGTCTCTCAATGCTCAAGTTTCAACTGGTTCGTGAAATCCC ACAACATTATATTCTTGATAGGTGGAAGAAGGATTTTCGACAGTTGCATGTGATGAGACG CCCTCCAAGCGATCTTGTTCCTAACAATCGCATGGATCGATATGACTATTTATCAATAAG ATGTTTGCAACTTGTTGACTCTGCAGTCCTATCAGATAAGTATCGCCTTGCTTTGAGGTT GGTAAGGGAGACAGAGAAATTTCTGCTAAATAGCAACACACATGATGATACACAACCAAG GATCAAGTCTCGTGTTCCTAAAGTAAATAAACCAAATATTGTGACTGGCCAAACCATGGT GGGTGCAGCTACTGGAAATGGAAATGATGGTCTCAAAGGACCAGAGGCTACAGCAGTCAC GCAAGTACCACAATCCCAAAAGGGAGGAGCAGAAAAAGGAATAGTTCCTACTGGCTACAT TGGAGTACCAGCTAATCTCCAACAATTTGTAGGCAATCAAACAGCATTTCGGCCAAGCAT TGTGTACATGGTACCGAGTGGTGTTGATCCACATGCTTTTGGAAATGTTATGATGCCAGT GATGTACCAGCAGATGTTCCAGGTGCCTCCGAAGCCAAATGAGACCGTGCAGGATACTTC AGCCAATGGAAAAAGTAAGCGACCTCGCGGTCAGAAGCTCACAGAGACATCCCAACAGGC AAATGGAACCCCAGCATCTGCATCTGGCTAGGGTGGACTACTAACATTTTGAACAGGATT TCTGTACATACGTTGACTTCGTTGACTTCATGCCGTGAGAAATTTTACATATGGACGCTG GCACTAACAATTACCTCAATGTTGTCCAAGGTATCTGGCCCAGGACCGGAAATTATCTCT CGCACACTTTCTTTTTGTGTGTGGCTGATTTCTGCAAGACAGGTTCCACCTAATGTACAA GTCCCCTTGTCCTTTTTATGCTATGTAAATGAATGTTCTTGGAACAGCTCTATCATGGCT CATGAGTACGGTGTCAGTTGCCTTCGAATTCCCATTGTCGATACCAGATCGATGGCTAAT G