Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017096_T029
CDS Infomation	cds chromosome:B73_RefGen_v4:5:185267483:185269554:-1 gene:Zm00001d017096 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase AFC2
Sequence	ATGGGAGAAGGTACCTTTGGTCAGGTGTTGGAGTGTTGGGACAAGGAAAGGAAAGAAATG GTGGCTATCAAAATCATTAGGGGCATTAAAAAGTACAGGGATGCTGCAATGATCGAAATT GGCATGCTCGAGCAGCTTGGTAAATATGATGAAAGTAGATCTAGTTGTGTTCAAATTCGG AACTGGTTTGACTATCGTAACCATATCTGTATTGTCTTTGAGAGGCTTGGACCAAGCTTA TATGATTTTCTGCGGGAAAACAGTTACCGCTCATTCCCAATTGCCCTAGTTCGGGAGATT GCCAAACAACTGTTGGAATGTATAGCATTTATGCACGAATTGTGTCTCATACACACTGAT TTAAAGCCTGAGAACATTCTCCTTGTTTCTCCGGAGTACATTAAAGTGCCTGATTACAAA GTTTCATCCCGATCCCCAAAGGAGGGATCCTATTACAAGCGGGTGCCCAAGTCTAGTGCT ATCAAGGTGATTGATTTTGGTAGCACTACCTATGATCAACAGGATCAGAGTTATGTTGTG TCGACGAGGCATTATCGGGCTCCAGAAGTTATACTGGGACTTGGATGGAGTTACCCATGT GATATCTGGAGTGTTGGTTGTATTCTTGTTGAGCTTTGCACGGGTGAGGCGATATTCCAG ACTCACGAAAACTTGGAACATCTGGCTATGATGGAGAGGGTTCTTGGACCTTTGCCATAC CATATGTTCAAGAGGGCAGATCGGCACTCTGACAAATACATCAGAAAAGGACGCCTGAAT TGGCCTGAGGGTTGCACTTCGCGTGAAAGCATGAAAGCTGTGATGAAATTGTCCAGGCTT CAGAACCTGGTGATGCAAAATGTGGATCAAGCTGCAGGAGATTTCATTGACCTTTTGCAA GGGCTGCTGAAGTATGATCCATCAAGCCGTTTAACAGCACGAGAGGCCCTGAGGCATCCC TTCTTTACCCAAGGGTTTTGGCGAAGATGA

Peptide Sequence

PEP ID	Zm00001d017096_P029
PEP Infomation	pep chromosome:B73_RefGen_v4:5:185267483:185269554:-1 gene:Zm00001d017096 transcript:Zm00001d017096_T029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase AFC2
Sequence	MGEGTFGQVLECWDKERKEMVAIKIIRGIKKYRDAAMIEIGMLEQLGKYDESRSSCVQIR NWFDYRNHICIVFERLGPSLYDFLRENSYRSFPIALVREIAKQLLECIAFMHELCLIHTD LKPENILLVSPEYIKVPDYKVSSRSPKEGSYYKRVPKSSAIKVIDFGSTTYDQQDQSYVV STRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEAIFQTHENLEHLAMMERVLGPLPY HMFKRADRHSDKYIRKGRLNWPEGCTSRESMKAVMKLSRLQNLVMQNVDQAAGDFIDLLQ GLLKYDPSSRLTAREALRHPFFTQGFWRR

Transcript Sequence

Transcript ID	Zm00001d017096_T029
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:185267483:185269554:-1 gene:Zm00001d017096 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase AFC2
Sequence	GATAAGATCAATGCAAAAATGGGAGAAGGTACCTTTGGTCAGGTGTTGGAGTGTTGGGAC AAGGAAAGGAAAGAAATGGTGGCTATCAAAATCATTAGGGGCATTAAAAAGTACAGGGAT GCTGCAATGATCGAAATTGGCATGCTCGAGCAGCTTGGTAAATATGATGAAAGTAGATCT AGTTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTCTTTGAG AGGCTTGGACCAAGCTTATATGATTTTCTGCGGGAAAACAGTTACCGCTCATTCCCAATT GCCCTAGTTCGGGAGATTGCCAAACAACTGTTGGAATGTATAGCATTTATGCACGAATTG TGTCTCATACACACTGATTTAAAGCCTGAGAACATTCTCCTTGTTTCTCCGGAGTACATT AAAGTGCCTGATTACAAAGTTTCATCCCGATCCCCAAAGGAGGGATCCTATTACAAGCGG GTGCCCAAGTCTAGTGCTATCAAGGTGATTGATTTTGGTAGCACTACCTATGATCAACAG GATCAGAGTTATGTTGTGTCGACGAGGCATTATCGGGCTCCAGAAGTTATACTGGGACTT GGATGGAGTTACCCATGTGATATCTGGAGTGTTGGTTGTATTCTTGTTGAGCTTTGCACG GGTGAGGCGATATTCCAGACTCACGAAAACTTGGAACATCTGGCTATGATGGAGAGGGTT CTTGGACCTTTGCCATACCATATGTTCAAGAGGGCAGATCGGCACTCTGACAAATACATC AGAAAAGGACGCCTGAATTGGCCTGAGGGTTGCACTTCGCGTGAAAGCATGAAAGCTGTG ATGAAATTGTCCAGGCTTCAGAACCTGGTGATGCAAAATGTGGATCAAGCTGCAGGAGAT TTCATTGACCTTTTGCAAGGGCTGCTGAAGTATGATCCATCAAGCCGTTTAACAGCACGA GAGGCCCTGAGGCATCCCTTCTTTACCCAAGGGTTTTGGCGAAGATGATGATACTCCTTG CATTCTACCTTGTTTGTCTGACTTGATGTCTTGCATTTGACAGTCTGTACTTTTCAGTGG TGTATGTAGGCGGTAGATCAATCTGTATAAAGCCGTTGTAGAGTTGTTTCA