Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017078_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:184648994:184657183:1 gene:Zm00001d017078 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCA1-associated RING domain protein 1
Sequence	ATGTCTAGAAAACGTGCCTTTTCCGAAGAAATTGGAGGCGCTACTGCATTGAAGAGCCTA CCAACTCCAATCGGTTTATTTGAAGATGAATGCGTTTTTTGTCATTCATTTAGAACGAGC CAGGGAAGAGTTGTGTCCATTGACGAGTGCGACTCATCAGATGCCATCTACGTCCATAGG AAATGTCTCGAGTGGGCTTCTGGAATATGGTTTAAGGGTGACATTGTTATGGACTTTAAG CCAGAAATTACACGTGCTTCAAAACTGAGATGCGCAAGATGTGGACTCAAGGGAGCAGCC CTTGGTTGTTATTACGGTCCTTGCCTCACAAGTTTTCACGTTCCATGTGCAGTTCAGACA ATTGGTTGCCGCTGGGATGGTGATGGTTATATGCTGTGCCCTCAGCATGTTTCAAATGCT CTACCATGTGATAAGCAGGGCACAGATACAAAGGAGAATTACAATGCTTCTTCTTTGCAT CAAAGCCAACATACAGATAAGAAAGGAAGTTTCGACGATCATAATAGGGAAAATGAACAA GCTGATCAGCTCAACATCTCAAACGCTTCCTTGCTGCCTCAGACTCGGAGTCCATACATA GAAAGGGAACAAGTTTTTGACAGTCGTCGTCGAAGGAAAAATGGACAAACAGATCATCTT GACATTTCGACTCCTTGTGTGCCACACAACCAACATTCTCATCCAAAAGAAGAAATATCC ACCGATAGTTCGAGAGATCATCACCAGCAAATAGATCAGCTTCAGACTTCAAGATCATCC TTGCCACTGGGGGCCTGCCAAGGGGAGGAGATGGAATCAGATCAGCCTGACGCATCAAGC TGCCCTGCTGATGAGTTAGTTTTGCTTGGTCTGTGTTTAAGTGTGGACGAGAAGGACTTC GTGCAAAAGTTTGCGTGTTGGACCAAGGCGACGCTGGCGGAGGAGTGGGCCGAGAATGTG ACCCATGTCATTGTGGGCAAAGGTGCTGGTAGTTCGTGGTGCAGGTCATTTGAGGTGCTT ATGGCAATACTGCTCGGGAAATGGGTTGTTCGTTTCGAATGGGTCGCGGACTGCTTGCAG CTGACTCCAGGTCCAGAGGCCTCCTATGAAGTACTACTACTAGCAGCATCCAGCATCGAT TCACTCGGCGCGAACGACGGGCCGAAGCAGAGCAGAATCCGGGCAACTGAAGGGGAACCG AAACTGTTTTCTGGGCTGTGTTTCTGCCTGAGCGACCTGATGAGCCCTGGCAACAGAGGC CGCACGCGGGGCCTCATAGCGGCCGGCGGCGGGCGGGTGCTGGACAAACGCGACCTGCGC CTTCTGCCGAAGAAGGATCCGGATCCTGACGGCCGCCGCTCTCCGTCTCCGGTGAACCCG AGGCCCTACTTCGTGTACGACGTCGAAGCGCCCGGAGGTGGTCGGTTCAGCGCGAGGCTG CTGCGGCGGGAGATCGACGAGGCGAGGGAGCAGGCGGCGGCCGGGGCGCAGGTGATCGGC CACCTCAGCGTGTTCGACGCCGTCGCGGCCTATGACGCGGGGATCCTGCTCGTGTGA

Peptide Sequence

PEP ID	Zm00001d017078_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:184648994:184657183:1 gene:Zm00001d017078 transcript:Zm00001d017078_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCA1-associated RING domain protein 1
Sequence	MSRKRAFSEEIGGATALKSLPTPIGLFEDECVFCHSFRTSQGRVVSIDECDSSDAIYVHR KCLEWASGIWFKGDIVMDFKPEITRASKLRCARCGLKGAALGCYYGPCLTSFHVPCAVQT IGCRWDGDGYMLCPQHVSNALPCDKQGTDTKENYNASSLHQSQHTDKKGSFDDHNRENEQ ADQLNISNASLLPQTRSPYIEREQVFDSRRRRKNGQTDHLDISTPCVPHNQHSHPKEEIS TDSSRDHHQQIDQLQTSRSSLPLGACQGEEMESDQPDASSCPADELVLLGLCLSVDEKDF VQKFACWTKATLAEEWAENVTHVIVGKGAGSSWCRSFEVLMAILLGKWVVRFEWVADCLQ LTPGPEASYEVLLLAASSIDSLGANDGPKQSRIRATEGEPKLFSGLCFCLSDLMSPGNRG RTRGLIAAGGGRVLDKRDLRLLPKKDPDPDGRRSPSPVNPRPYFVYDVEAPGGGRFSARL LRREIDEAREQAAAGAQVIGHLSVFDAVAAYDAGILLV

Transcript Sequence

Transcript ID	Zm00001d017078_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:184648994:184657183:1 gene:Zm00001d017078 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCA1-associated RING domain protein 1
Sequence	GTTTCAGTTTGAACGTGCGTTGACTACTGGAGGTGAGAGGTGAAGAGGCCAGGAGCTGAA AGGGCCCGAGCTCGACGGCTTTCTTCTCCCGGACGCGCGAGCGCGATCGTCCCGCCGTCC AGGTGAGGTACAAGACATGCTCCTAATGTGGGCATAAAGCGTGGTCAAAGAGAAATAAAC TGTCCAACTCAAACCCGTGTAAACATTTTCTTTCATTTGTCGAGTATCACCGTTGAAAGG TGGAGAAGTAAAAGTTGTGGCAGTTTCTGTGGAACCACCATCCCCTCATACTAGGCAAAG CAAGACAGCGGTCGGAGGACCAAATCAGTGTTCATACAAAGAAATCATTATGTCTAGAAA ACGTGCCTTTTCCGAAGAAATTGGAGGCGCTACTGCATTGAAGAGCCTACCAACTCCAAT CGGTTTATTTGAAGATGAATGCGTTTTTTGTCATTCATTTAGAACGAGCCAGGGAAGAGT TGTGTCCATTGACGAGTGCGACTCATCAGATGCCATCTACGTCCATAGGAAATGTCTCGA GTGGGCTTCTGGAATATGGTTTAAGGGTGACATTGTTATGGACTTTAAGCCAGAAATTAC ACGTGCTTCAAAACTGAGATGCGCAAGATGTGGACTCAAGGGAGCAGCCCTTGGTTGTTA TTACGGTCCTTGCCTCACAAGTTTTCACGTTCCATGTGCAGTTCAGACAATTGGTTGCCG CTGGGATGGTGATGGTTATATGCTGTGCCCTCAGCATGTTTCAAATGCTCTACCATGTGA TAAGCAGGGCACAGATACAAAGGAGAATTACAATGCTTCTTCTTTGCATCAAAGCCAACA TACAGATAAGAAAGGAAGTTTCGACGATCATAATAGGGAAAATGAACAAGCTGATCAGCT CAACATCTCAAACGCTTCCTTGCTGCCTCAGACTCGGAGTCCATACATAGAAAGGGAACA AGTTTTTGACAGTCGTCGTCGAAGGAAAAATGGACAAACAGATCATCTTGACATTTCGAC TCCTTGTGTGCCACACAACCAACATTCTCATCCAAAAGAAGAAATATCCACCGATAGTTC GAGAGATCATCACCAGCAAATAGATCAGCTTCAGACTTCAAGATCATCCTTGCCACTGGG GGCCTGCCAAGGGGAGGAGATGGAATCAGATCAGCCTGACGCATCAAGCTGCCCTGCTGA TGAGTTAGTTTTGCTTGGTCTGTGTTTAAGTGTGGACGAGAAGGACTTCGTGCAAAAGTT TGCGTGTTGGACCAAGGCGACGCTGGCGGAGGAGTGGGCCGAGAATGTGACCCATGTCAT TGTGGGCAAAGGTGCTGGTAGTTCGTGGTGCAGGTCATTTGAGGTGCTTATGGCAATACT GCTCGGGAAATGGGTTGTTCGTTTCGAATGGGTCGCGGACTGCTTGCAGCTGACTCCAGG TCCAGAGGCCTCCTATGAAGTACTACTACTAGCAGCATCCAGCATCGATTCACTCGGCGC GAACGACGGGCCGAAGCAGAGCAGAATCCGGGCAACTGAAGGGGAACCGAAACTGTTTTC TGGGCTGTGTTTCTGCCTGAGCGACCTGATGAGCCCTGGCAACAGAGGCCGCACGCGGGG CCTCATAGCGGCCGGCGGCGGGCGGGTGCTGGACAAACGCGACCTGCGCCTTCTGCCGAA GAAGGATCCGGATCCTGACGGCCGCCGCTCTCCGTCTCCGGTGAACCCGAGGCCCTACTT CGTGTACGACGTCGAAGCGCCCGGAGGTGGTCGGTTCAGCGCGAGGCTGCTGCGGCGGGA GATCGACGAGGCGAGGGAGCAGGCGGCGGCCGGGGCGCAGGTGATCGGCCACCTCAGCGT GTTCGACGCCGTCGCGGCCTATGACGCGGGGATCCTGCTCGTGTGA