Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017049_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:5:183887445:183891227:-1 gene:Zm00001d017049 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA processing Brix domain protein
Sequence

ATGGCGAAGAAGCGGAAGCACACCGACGCCCAGGCAGAGACGGCCGGCGCAGAGAAGCCA
GACGACTCCGCACCGGCGCGCCCGGAGCGCACGCTCTTCGGCTTCAAGGATCCGGCCCCC
GACGCCGTGCCTGACTCCGCGGCCTCCAGGGCCGCGGTGGCGCCGTTTAGGAACAGGGAG
AAGGTACTCATCACCTGCTCCCGCCGCATCACGTACAGGTATCGTCATCTGATGCAGGAC
GTGTTGTCGATGCTCCCGCACGCGAAGAAGGACAGCAAGGTCGAGTCGAAGCAGAGCAAG
GGGAACGCTCTCAACGAGATGCTCGAGCTCAGGAGCTGCTCCAGTTGTCTCTTCTTCGAG
TGCCGAAAACAGAAGGATCTTTACCTTTGGATGGTGAAGTCTCCTGGAGGACCATCAGTG
AAATTTCTAGTTAATGCTGTTCACACCATGGAGGAGTTGAAGCTTACGGGTAACCATCTG
AAAGGGTCACGGCCACTTCTTACATTTTCTACAAATTTTGATGAGCAACCTCATTGGAAG
CTTGTGAAGGAAATTATAACTCATATATTTGCTACTCCTAAAGATCACCGTAAAGCAAAA
CCTTTCCATGACCATGTATTTGTCTTCTCCATTGTGGATGGCCATGTTTGGTTTCGAAAC
TACCAGATTTCTGTTCCCCACAATGAGATTGATAAAGTTGATAAAGGTGGTATGGATAAA
ATGACACTTATTGAGGTTGGCCCCAGGTTCTGTTTGAATCCAATCAAAATATTTGGTGGT
AGTTTTGGTGGTCCTACATGA

Peptide Sequence

PEP ID

Zm00001d017049_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:5:183887445:183891227:-1 gene:Zm00001d017049 transcript:Zm00001d017049_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA processing Brix domain protein
Sequence

MAKKRKHTDAQAETAGAEKPDDSAPARPERTLFGFKDPAPDAVPDSAASRAAVAPFRNRE
KVLITCSRRITYRYRHLMQDVLSMLPHAKKDSKVESKQSKGNALNEMLELRSCSSCLFFE
CRKQKDLYLWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSTNFDEQPHWK
LVKEIITHIFATPKDHRKAKPFHDHVFVFSIVDGHVWFRNYQISVPHNEIDKVDKGGMDK
MTLIEVGPRFCLNPIKIFGGSFGGPT

Transcript Sequence

Transcript ID

Zm00001d017049_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:183887445:183891227:-1 gene:Zm00001d017049 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA processing Brix domain protein
Sequence

AGGCCTACTTGGCGCGTCTCTCTCTGTCTAGCGGCCGAGTTTAACAGTTAAACCCTAGCT
CACCGTCGTGCTCGCCTCCCCGCGCCTGCTCCGGTGCTCCCTTCAGGCACTGACAGTTCG
CCGCCGCGGCGGCGCTTTCGAGCCCACGCGGAAGCGCACCTAGTGCCATGGCGAAGAAGC
GGAAGCACACCGACGCCCAGGCAGAGACGGCCGGCGCAGAGAAGCCAGACGACTCCGCAC
CGGCGCGCCCGGAGCGCACGCTCTTCGGCTTCAAGGATCCGGCCCCCGACGCCGTGCCTG
ACTCCGCGGCCTCCAGGGCCGCGGTGGCGCCGTTTAGGAACAGGGAGAAGGTACTCATCA
CCTGCTCCCGCCGCATCACGTACAGGTATCGTCATCTGATGCAGGACGTGTTGTCGATGC
TCCCGCACGCGAAGAAGGACAGCAAGGTCGAGTCGAAGCAGAGCAAGGGGAACGCTCTCA
ACGAGATGCTCGAGCTCAGGAGCTGCTCCAGTTGTCTCTTCTTCGAGTGCCGAAAACAGA
AGGATCTTTACCTTTGGATGGTGAAGTCTCCTGGAGGACCATCAGTGAAATTTCTAGTTA
ATGCTGTTCACACCATGGAGGAGTTGAAGCTTACGGGTAACCATCTGAAAGGGTCACGGC
CACTTCTTACATTTTCTACAAATTTTGATGAGCAACCTCATTGGAAGCTTGTGAAGGAAA
TTATAACTCATATATTTGCTACTCCTAAAGATCACCGTAAAGCAAAACCTTTCCATGACC
ATGTATTTGTCTTCTCCATTGTGGATGGCCATGTTTGGTTTCGAAACTACCAGATTTCTG
TTCCCCACAATGAGATTGATAAAGTTGATAAAGGTGGTATGGATAAAATGACACTTATTG
AGGTTGGCCCCAGGTTCTGTTTGAATCCAATCAAAATATTTGGTGGTAGTTTTGGTGGTC
CTACATGATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGAA
GGCCAAGGTGAGGAGGAAGATGCACGAGATGGAGAACACGCTGGAGCCTGATGAGTTTGC
TGAGCTCTGGAAAGGGGAGTAGGCTTTGATCGACCCTGTCAATGTCGTGAAGCACCCGCA
ACTCCTGTCAGCAAGCGCAGATTTTGTTTACCTGTGTGGCAGTGTCTATGTTGTGGAAGT
TTTGTATGACAAGGCCTACGTTTATTTTACATAAAATCGGATTTTAGT