Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017047_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:183747380:183749370:-1 gene:Zm00001d017047 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L6

Sequence

ATGGCGCCGACGTCGAAGCTGTCGATGGGCATCAAGCGCGCGTCGCGGTCGCACGCGTAC
CACCGCCGTGGGCTCTGGGCCATCAAGGCCAAGAACGGCGGCGTCTTCCCCAAGGCCGAG
AAGCCCGCCGCCGCCGCGGAACCCAAGTTCTACCCCGCCGACGACGTCAAGCCTCGCGTT
CCCAGCACCCGCAAGCCTAATCCCACCAAGCTCAGGTCGAGCATCACGCCTGGGACGGTG
CTGATCCTCCTCGCGGGGCGCTTCATGGGGAAGAGAGTGGTGTTCCTCAAGCAGCTCAAC
TCCGGCCTGCTCCTCGTCTCTGGTCCATTCAAGATCAATGGAGTACCGATCCGTCGTGTC
AACCAGACCTATGTCATTGCTACATCAACCAAGGTTGACATCTCTGGTGTTGATGTCGCG
AAGTTTGATGACAAGTACTTTGCCAGGGAGAAAAAGCAGAAGGTGAAGAAGACGGAGGGT
GAGCTTTTTGAGACAGAGAAGGAGGCGTCCAAGTCTCTGCCTGATTTCAAAAAGGATGAC
CAGAAGGCCGTGGATGCTGCTCTGATCAAGGCTATTGAGGCTATCCCAGAGCTGAAGGCC
TATCTTGGCGCTCGGTTCTCCCTTAGGGATGGTGACAAGCCCCACGAGATGGTCTTCTAA

Peptide Sequence

PEP ID

Zm00001d017047_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:183747380:183749370:-1 gene:Zm00001d017047 transcript:Zm00001d017047_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L6

Sequence

MAPTSKLSMGIKRASRSHAYHRRGLWAIKAKNGGVFPKAEKPAAAAEPKFYPADDVKPRV
PSTRKPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLNSGLLLVSGPFKINGVPIRRV
NQTYVIATSTKVDISGVDVAKFDDKYFAREKKQKVKKTEGELFETEKEASKSLPDFKKDD
QKAVDAALIKAIEAIPELKAYLGARFSLRDGDKPHEMVF

Transcript Sequence

Transcript ID

Zm00001d017047_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:183747380:183749370:-1 gene:Zm00001d017047 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L6

Sequence

ACGATCTAGGGTTTCCAGCTCTACACGCCGCACACATAAATCCCGAGACCAAACCTTCGC
CTCCATTCGTCCCCCGCCGCCGCCGCTCCCAGTCTCCACGCGGAAGCAGCGCCTCGCAAC
GCTCCTACCCAATGGCGCCGACGTCGAAGCTGTCGATGGGCATCAAGCGCGCGTCGCGGT
CGCACGCGTACCACCGCCGTGGGCTCTGGGCCATCAAGGCCAAGAACGGCGGCGTCTTCC
CCAAGGCCGAGAAGCCCGCCGCCGCCGCGGAACCCAAGTTCTACCCCGCCGACGACGTCA
AGCCTCGCGTTCCCAGCACCCGCAAGCCTAATCCCACCAAGCTCAGGTCGAGCATCACGC
CTGGGACGGTGCTGATCCTCCTCGCGGGGCGCTTCATGGGGAAGAGAGTGGTGTTCCTCA
AGCAGCTCAACTCCGGCCTGCTCCTCGTCTCTGGTCCATTCAAGATCAATGGAGTACCGA
TCCGTCGTGTCAACCAGACCTATGTCATTGCTACATCAACCAAGGTTGACATCTCTGGTG
TTGATGTCGCGAAGTTTGATGACAAGTACTTTGCCAGGGAGAAAAAGCAGAAGGTGAAGA
AGACGGAGGGTGAGCTTTTTGAGACAGAGAAGGAGGCGTCCAAGTCTCTGCCTGATTTCA
AAAAGGATGACCAGAAGGCCGTGGATGCTGCTCTGATCAAGGCTATTGAGGCTATCCCAG
AGCTGAAGGCCTATCTTGGCGCTCGGTTCTCCCTTAGGGATGGTGACAAGCCCCACGAGA
TGGTCTTCTAAACCGAGTTTTGGAGTTCGGAGGAAGTCGCTTTGGCTGTGCTCTCTTGTG
ACAAGCCCCACGAGATGGTCTCCCAGAGCTGAAGGCCTACCTTGTTTCATTCTGCTTGAA
GTCTGTCAAATATTATGAGAAGATCTAAGAAAGTTTTATCGGTATTGGTGGTTCAGCATG
GCGTTATCTGCTTTTGGTTCTTTGTGTAGGTCAATGTTGTCTTAAGATCATATTTTGTTT
GAATTGCTGACTGTCGTGTTTTTTTGCTATCTTTGAACGTCTTAACCGTTCCACTAAGAG
CATGTTTGGATGAGTTAGGTTTTAGTTACTAGTTGAGCTAAGGCTATCTCCAGGACATTT
TCTATTTCAAACTTTTCTCTGCAAACATTGTTAACTG