Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017034_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:5:183230567:183235728:-1 gene:Zm00001d017034 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fimbrin-1
Sequence	ATGTCTACCTTCATCGGCGTTCTTGTCTCCGATCCAGGGCTGCAGAGCCAGTTCACCCAG GTGCAGCTCAGGACCCTTCAAACAAAGTTTGCATCCGCAAAGCGACCAAACGCAGAACAT GTGACCATAAAGGATTTGCCCCCGATGATGGAAAAGCTGAGGGGCATCCACGAAGTCCTG TCCGAAGAAGAGATCAGCGGGTTTTTGAGCGAGACCTATCCTGACATGAACCAGCCTATA GAATTCGAGCCGTTCCTCAAGCCTCGTAAAATTTGTCAGGAGTACTTAAATATACAAGCC AAAGGGAGCAGCAAATCGGGAGGCAAGAAGAAGCTGAAGGGGTCCGTGTCGTTTCTGAAG GCTTCCACCACCACTCTCCTTCACGTCATCAACGAGTCCGAGAAGACTTCCTACGTGAAC CACATAAACAATTTCCTGAAGGAGGATCCTTTCCTGAAGAATTTCTTGCCGCTGGATCCG GCATCCAACGAGCTGTTCAACCTTGTTCGGGACGGCGTGCTACTTTGCAAGTTGATCAAC GTTGCTGTTCCGGGCACGATAGATGAGAGAGCGATTAACACAAAGAAGCATCTTAATCCA TGGGAGAGGAACGAGAACCATACCCTTTGTCTCAACTCTGCCAAGGCCATTGGTTGCACT GTTGTTAACATTGGAACACAAGATCTGATTGAAGCCAGGCCTCATCTGGTTCTTGGACTG TTATGCCAGATCATAAAGATACAACTACTGGCTGATCTGAATCTAAAGAAGACGCCTCAG TTGGCAGAGTTGGTGGCTGATGATAATGGCAAGGAAGTAGAGGAGCTGGTCACCTTAGCA CCGGATAAGATGTTGCTTAAATGGATGAACTTCCATCTCAAGAAAGCAGGGTATAAAAAA ACTGTGACAAATTTCTCTACTGATGTGAAGGATGGTGAAGCGTATGCTTACCTTCTCAGC ACCCTTGCTCCAGAGCTTAGCTCAAAAACCATGATAGAAACTTCAGATCCAAAGGAGAGG GCACAGAAAGTACTTGAAACCGCAGAAAAGCTCGATTGTACAAGATATGTAACGTCTAAA GATATTGTTGAAGGTTCCGCCAATCTTAACTTGGCATTCGTTGCTCAAATATTCCAGAAC AGAAATGGTTTATCAACCAACACTGTGGCTCCCGTTATTGAAGATACTCCTGATGACGTG GAGGCATCCAGGGAAGAGAGAGCATTTCGCCTATGGATCAACAGCCTTGGAATTCCAACT TATGTCAACAATTTGTTTGAGGATGTTAGGACTGGATGGGTTTTGCTAGAGGTTCTTGAC AAAATTTCTCCAGGGTCAGTTAACTGGAAGCATGCATCCAAACCACCAATCATTATGCCG TTTAGAAAGGTTGAAAACTGCAACCAGGTTATCAAAATCGGCAAGGAGCTAAACTTTTCT CTGGTAAATGTAGCAGGAAATGATATTGTGCAAGGAAACAAGAAACTGATTCTAGCTTTC CTGTGGCAACTCATGAGGACTAGTATCCTACAATTGCTGAGGAACTTGAGATCCCACTCT AAAGAGAAAGAGATGACAGATGCTGACATTCTCATTTGGGCTAATAGCAAGGTCAAGGAA TCAGGCAAAAATTCACATATTGAAAGCTTCAAGGACAAAACGATAGCAGATGGGGTGTTC TTCCTTGAGCTCCTAAGTGCTGTGCAGAGCAGGGTTGTTGACTGGAACATGGTGAAGAAG GGGGAGGATGAGGAGGAGAAGAAGCTGAATGCAACATACATAATCAGTGTTGCTAGGAAG CTAGGTTGCACTGTCTTCTTGCTACCTGAAGACATAATGGAGGTGAACCCAAAGATGATC CTCACCCTGACAGCAAGCATCATGTACTGGAGCCTGCAGAATCAAGGGCCATACAAGAGT TCAGGACCACAGGATGCTCTTCTAGAGGAAGAGGAAGGCGAGGAGGAGGAAGAAGAAGAA GAAGAGGAGGAAGAGGAGGAGGAGGATTTCGAAGGAGGTGTCGAAGATGGTGTCTCTGAA ACGACCACTTGA

Peptide Sequence

PEP ID	Zm00001d017034_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:5:183230567:183235728:-1 gene:Zm00001d017034 transcript:Zm00001d017034_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fimbrin-1
Sequence	MSTFIGVLVSDPGLQSQFTQVQLRTLQTKFASAKRPNAEHVTIKDLPPMMEKLRGIHEVL SEEEISGFLSETYPDMNQPIEFEPFLKPRKICQEYLNIQAKGSSKSGGKKKLKGSVSFLK ASTTTLLHVINESEKTSYVNHINNFLKEDPFLKNFLPLDPASNELFNLVRDGVLLCKLIN VAVPGTIDERAINTKKHLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLIEARPHLVLGL LCQIIKIQLLADLNLKKTPQLAELVADDNGKEVEELVTLAPDKMLLKWMNFHLKKAGYKK TVTNFSTDVKDGEAYAYLLSTLAPELSSKTMIETSDPKERAQKVLETAEKLDCTRYVTSK DIVEGSANLNLAFVAQIFQNRNGLSTNTVAPVIEDTPDDVEASREERAFRLWINSLGIPT YVNNLFEDVRTGWVLLEVLDKISPGSVNWKHASKPPIIMPFRKVENCNQVIKIGKELNFS LVNVAGNDIVQGNKKLILAFLWQLMRTSILQLLRNLRSHSKEKEMTDADILIWANSKVKE SGKNSHIESFKDKTIADGVFFLELLSAVQSRVVDWNMVKKGEDEEEKKLNATYIISVARK LGCTVFLLPEDIMEVNPKMILTLTASIMYWSLQNQGPYKSSGPQDALLEEEEGEEEEEEE EEEEEEEEDFEGGVEDGVSETTT

Transcript Sequence

Transcript ID	Zm00001d017034_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:183230567:183235728:-1 gene:Zm00001d017034 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fimbrin-1
Sequence	GTGTTCTCTTCGAAGGCAGAAGACCTCCCTTTTTTACTTTACCCCTCCAGGAAGCGCCAA AAAAAAAAAATCCATGGAAGGGTAATGGCAGCTCGTCCCGCCTGTTGCTGAGGAAAGAGT TCTGTGACGGGAGAAAGGCAACGATTACCTAGTCTCGTCACTGTAAGTTGGAAGGCCATG TCTACCTTCATCGGCGTTCTTGTCTCCGATCCAGGGCTGCAGAGCCAGTTCACCCAGGTG CAGCTCAGGACCCTTCAAACAAAGTTTGCATCCGCAAAGCGACCAAACGCAGAACATGTG ACCATAAAGGATTTGCCCCCGATGATGGAAAAGCTGAGGGGCATCCACGAAGTCCTGTCC GAAGAAGAGATCAGCGGGTTTTTGAGCGAGACCTATCCTGACATGAACCAGCCTATAGAA TTCGAGCCGTTCCTCAAGCCTCGTAAAATTTGTCAGGAGTACTTAAATATACAAGCCAAA GGGAGCAGCAAATCGGGAGGCAAGAAGAAGCTGAAGGGGTCCGTGTCGTTTCTGAAGGCT TCCACCACCACTCTCCTTCACGTCATCAACGAGTCCGAGAAGACTTCCTACGTGAACCAC ATAAACAATTTCCTGAAGGAGGATCCTTTCCTGAAGAATTTCTTGCCGCTGGATCCGGCA TCCAACGAGCTGTTCAACCTTGTTCGGGACGGCGTGCTACTTTGCAAGTTGATCAACGTT GCTGTTCCGGGCACGATAGATGAGAGAGCGATTAACACAAAGAAGCATCTTAATCCATGG GAGAGGAACGAGAACCATACCCTTTGTCTCAACTCTGCCAAGGCCATTGGTTGCACTGTT GTTAACATTGGAACACAAGATCTGATTGAAGCCAGGCCTCATCTGGTTCTTGGACTGTTA TGCCAGATCATAAAGATACAACTACTGGCTGATCTGAATCTAAAGAAGACGCCTCAGTTG GCAGAGTTGGTGGCTGATGATAATGGCAAGGAAGTAGAGGAGCTGGTCACCTTAGCACCG GATAAGATGTTGCTTAAATGGATGAACTTCCATCTCAAGAAAGCAGGGTATAAAAAAACT GTGACAAATTTCTCTACTGATGTGAAGGATGGTGAAGCGTATGCTTACCTTCTCAGCACC CTTGCTCCAGAGCTTAGCTCAAAAACCATGATAGAAACTTCAGATCCAAAGGAGAGGGCA CAGAAAGTACTTGAAACCGCAGAAAAGCTCGATTGTACAAGATATGTAACGTCTAAAGAT ATTGTTGAAGGTTCCGCCAATCTTAACTTGGCATTCGTTGCTCAAATATTCCAGAACAGA AATGGTTTATCAACCAACACTGTGGCTCCCGTTATTGAAGATACTCCTGATGACGTGGAG GCATCCAGGGAAGAGAGAGCATTTCGCCTATGGATCAACAGCCTTGGAATTCCAACTTAT GTCAACAATTTGTTTGAGGATGTTAGGACTGGATGGGTTTTGCTAGAGGTTCTTGACAAA ATTTCTCCAGGGTCAGTTAACTGGAAGCATGCATCCAAACCACCAATCATTATGCCGTTT AGAAAGGTTGAAAACTGCAACCAGGTTATCAAAATCGGCAAGGAGCTAAACTTTTCTCTG GTAAATGTAGCAGGAAATGATATTGTGCAAGGAAACAAGAAACTGATTCTAGCTTTCCTG TGGCAACTCATGAGGACTAGTATCCTACAATTGCTGAGGAACTTGAGATCCCACTCTAAA GAGAAAGAGATGACAGATGCTGACATTCTCATTTGGGCTAATAGCAAGGTCAAGGAATCA GGCAAAAATTCACATATTGAAAGCTTCAAGGACAAAACGATAGCAGATGGGGTGTTCTTC CTTGAGCTCCTAAGTGCTGTGCAGAGCAGGGTTGTTGACTGGAACATGGTGAAGAAGGGG GAGGATGAGGAGGAGAAGAAGCTGAATGCAACATACATAATCAGTGTTGCTAGGAAGCTA GGTTGCACTGTCTTCTTGCTACCTGAAGACATAATGGAGGTGAACCCAAAGATGATCCTC ACCCTGACAGCAAGCATCATGTACTGGAGCCTGCAGAATCAAGGGCCATACAAGAGTTCA GGACCACAGGATGCTCTTCTAGAGGAAGAGGAAGGCGAGGAGGAGGAAGAAGAAGAAGAA GAGGAGGAAGAGGAGGAGGAGGATTTCGAAGGAGGTGTCGAAGATGGTGTCTCTGAAACG ACCACTTGATAAGAATTGTCACGCTTGACTAGCCATTGCCGGTAAAGTCACTGGTCTATT AGGGGCATATATATTTCTAAATGCTGAGGCCTGAGGCAGAGAAGAAAATCTAAGGGGGTG CAAAGAAGAAATTTTTGGGTG