Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017030_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:183181317:183184853:1 gene:Zm00001d017030 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FLUORESCENT IN BLUE LIGHT chloroplastic
Sequence

ATGCAGGCGGCAGTCGGCCACCGCGGCGCCAACCTTGGCTCCCCGTCACTCTCGCGCTTC
CGGTATGGCTTCCGCCTCCCCGGCCGGTCCCGCCTCTTCTCTGTAGAGGGCGTGGCGGCG
GCGTCACTCCGCGTCGGCTCTCTGCCCCAGCCACGGACCCATGGCAGCGGCGGTTTCGCG
CACCTCGGGGCCATGGGTGGGGAGGCGCCGAGGCTGCCGCACGCCCTCAGGAGAATGCTT
ATCGATCATCAGAAAATGGCATGTCCCAACCTTCTGAAAGCTGCTGTACTTTCAACCATG
ACATTGCTTTCTGTACCTCTTGAGGCGTCAGCGGAGATGTGCCAGCCACCTAGTTCTTTC
GCCAATATGCCAATTTTTATTGTTGTAGCACTAATAGGAGCTGCTGTTGGCGGATTATTA
GCACGCCAAAGAAAGGCGGAATTGAAGCGGCTCAATAATCAACTTCGCCAGATCAATGCA
GCACTTAGAAGGCAGGCACAGATTGAGTCATTTGCGCCTGGCCTTACTTATGCGCCAGTT
GGGAGAACAAATGAAACTGATGTTATTGTTGACCCAAGGAAGCAGCAGTTGGTCACAAAC
CTGAGAAATGGGAAGAATTACATGAGGAATCAAGATCTTGATAAGGCTATAGTGGAGTTC
AGAACAGCTCTGGAGCTTGCAGAGAGCATAGGTGATCGTTTTGAAGAAAAGAAAGCTGCC
CGAGGACTAGGCGCATCGCTGCAGAGGCTCGGGAAGTACCGAGAAGCAATGAGACAGTAC
AGCAAGGTTCTGGAGCTGTCCAAGGAGACAGGTGAAGATTCCGGCTGCACCGAGGCCTAC
GGTGCCATAGCGGACTGCTACACCGAGCTGGGCGACCTGGAGCGAGCGGCGAAGGTGTAT
GACAAGTACATATCGAGGCTGCAGCCCGGCGAGTAA

Peptide Sequence

PEP ID

Zm00001d017030_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:183181317:183184853:1 gene:Zm00001d017030 transcript:Zm00001d017030_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FLUORESCENT IN BLUE LIGHT chloroplastic
Sequence

MQAAVGHRGANLGSPSLSRFRYGFRLPGRSRLFSVEGVAAASLRVGSLPQPRTHGSGGFA
HLGAMGGEAPRLPHALRRMLIDHQKMACPNLLKAAVLSTMTLLSVPLEASAEMCQPPSSF
ANMPIFIVVALIGAAVGGLLARQRKAELKRLNNQLRQINAALRRQAQIESFAPGLTYAPV
GRTNETDVIVDPRKQQLVTNLRNGKNYMRNQDLDKAIVEFRTALELAESIGDRFEEKKAA
RGLGASLQRLGKYREAMRQYSKVLELSKETGEDSGCTEAYGAIADCYTELGDLERAAKVY
DKYISRLQPGE

Transcript Sequence

Transcript ID

Zm00001d017030_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:183181317:183184853:1 gene:Zm00001d017030 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FLUORESCENT IN BLUE LIGHT chloroplastic
Sequence

ACCTTCGCGCGGTGATGGAGCACGCGCACGCGACCTCGACACGCACGCAGCAGCCAGCAG
GTGACCGCCGTCACGCGACCGCTTCCCACACTCCCTTCCCCACCAGCCGAAACCGAGGCT
GACGCTGCGCGAGCCAACCGGCGGTGATGCAGGCGGCAGTCGGCCACCGCGGCGCCAACC
TTGGCTCCCCGTCACTCTCGCGCTTCCGGTATGGCTTCCGCCTCCCCGGCCGGTCCCGCC
TCTTCTCTGTAGAGGGCGTGGCGGCGGCGTCACTCCGCGTCGGCTCTCTGCCCCAGCCAC
GGACCCATGGCAGCGGCGGTTTCGCGCACCTCGGGGCCATGGGTGGGGAGGCGCCGAGGC
TGCCGCACGCCCTCAGGAGAATGCTTATCGATCATCAGAAAATGGCATGTCCCAACCTTC
TGAAAGCTGCTGTACTTTCAACCATGACATTGCTTTCTGTACCTCTTGAGGCGTCAGCGG
AGATGTGCCAGCCACCTAGTTCTTTCGCCAATATGCCAATTTTTATTGTTGTAGCACTAA
TAGGAGCTGCTGTTGGCGGATTATTAGCACGCCAAAGAAAGGCGGAATTGAAGCGGCTCA
ATAATCAACTTCGCCAGATCAATGCAGCACTTAGAAGGCAGGCACAGATTGAGTCATTTG
CGCCTGGCCTTACTTATGCGCCAGTTGGGAGAACAAATGAAACTGATGTTATTGTTGACC
CAAGGAAGCAGCAGTTGGTCACAAACCTGAGAAATGGGAAGAATTACATGAGGAATCAAG
ATCTTGATAAGGCTATAGTGGAGTTCAGAACAGCTCTGGAGCTTGCAGAGAGCATAGGTG
ATCGTTTTGAAGAAAAGAAAGCTGCCCGAGGACTAGGCGCATCGCTGCAGAGGCTCGGGA
AGTACCGAGAAGCAATGAGACAGTACAGCAAGGTTCTGGAGCTGTCCAAGGAGACAGGTG
AAGATTCCGGCTGCACCGAGGCCTACGGTGCCATAGCGGACTGCTACACCGAGCTGGGCG
ACCTGGAGCGAGCGGCGAAGGTGTATGACAAGTACATATCGAGGCTGCAGCCCGGCGAGT
AAGGTAGATTTCTTTACAGACGAGACAGCGAGTTCCTTCCCGTTCGTTGAGTTTTGCGTT
TTGTCGGTCTTGTTAAACTCACTGCAGGTATTGGATTGTTTTGAGAACGATTTTAATATT
CGTATATAAATAACTATTGATTTAATCAAAAAAATAAAAATAAATCACAACGCACTCGCC
CAGCTAGTCTCCATCCGTGTTTTACTTAAAAAGAAAGGTGAATCGTTGAATGTGAACACC
GAAAATGCACGTACCAGTCCGTTTGC