Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017021_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:182894380:182895386:-1 gene:Zm00001d017021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Late embryogenesis abundant protein 3
Sequence

ATGAACCACCACCAGGCCCAGCCCGTCCGCACCGGCGACGTCTACCCACCGACCGCCGTC
AAGCGAGAGGCGAGCCACGAGCGGGACAAGATCATTGAACAAGGAGATCAGCGGGGCGGC
GCCCTCCACGTCGACCAGACAGATCTTCCCGCCGGCAGACGCATGGTCACCGCCAGCGCA
GGCGGCCAGGTGATGGCACAGTTCACCGTGCCCGTGCCGGACACCAAGGTCGCGGAGGCC
ACGGACGCGGTCACCCTCGGCGAGGCCCTCCATGCCGCGGCGCAGACGTCGGCGGGCGAC
AAGCCCGTGGACCTCGCCGACGCTGCGGCGCTGCAGGCCGCCGAGGCGCGCGCGACGGGG
CTGGGCGGCAACGTACGCGGCGGCGTGGCGGCCGCCGCGCAGCAGGCCGCGGAGACGAAC
GCGAAGCGAGCGGAGGACGGCGGCGGTGGCGACAGGGTGACGCTCAGGGACGTGGTGGGC
GGCGACGCCGCGGCGGCGATGGCCGCCGACAAGGTGGCCACGAGGGAGGACGCCGAGAAG
GTGGCGGCTGCCGCGGCGCGCAACGTGGGGAAGGGGGCCGGCGGTGGCGTCGCCGAGGCT
GTCGTGGCGGCGGCGGATATGAACGAGGGGAGGATGATGTAA

Peptide Sequence

PEP ID

Zm00001d017021_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:182894380:182895386:-1 gene:Zm00001d017021 transcript:Zm00001d017021_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Late embryogenesis abundant protein 3
Sequence

MNHHQAQPVRTGDVYPPTAVKREASHERDKIIEQGDQRGGALHVDQTDLPAGRRMVTASA
GGQVMAQFTVPVPDTKVAEATDAVTLGEALHAAAQTSAGDKPVDLADAAALQAAEARATG
LGGNVRGGVAAAAQQAAETNAKRAEDGGGGDRVTLRDVVGGDAAAAMAADKVATREDAEK
VAAAAARNVGKGAGGGVAEAVVAAADMNEGRMM

Transcript Sequence

Transcript ID

Zm00001d017021_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:182894380:182895386:-1 gene:Zm00001d017021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Late embryogenesis abundant protein 3
Sequence

AATAATTTAATTTATAGTTATAGTATAGGAGGAGTGTATATACACCTCGTGTGCTTCTGC
TGCACAGCTATGCCTCTCGGAGCTAGCCAAACAGAGTTGCGATCCTTAAATTTCTTGGCT
GTTTTGCCCAGGTATCCAAACAGATTGCGATCGCGAGTCCGGAGGTCGGCAGCATGAACC
ACCACCAGGCCCAGCCCGTCCGCACCGGCGACGTCTACCCACCGACCGCCGTCAAGCGAG
AGGCGAGCCACGAGCGGGACAAGATCATTGAACAAGGAGATCAGCGGGGCGGCGCCCTCC
ACGTCGACCAGACAGATCTTCCCGCCGGCAGACGCATGGTCACCGCCAGCGCAGGCGGCC
AGGTGATGGCACAGTTCACCGTGCCCGTGCCGGACACCAAGGTCGCGGAGGCCACGGACG
CGGTCACCCTCGGCGAGGCCCTCCATGCCGCGGCGCAGACGTCGGCGGGCGACAAGCCCG
TGGACCTCGCCGACGCTGCGGCGCTGCAGGCCGCCGAGGCGCGCGCGACGGGGCTGGGCG
GCAACGTACGCGGCGGCGTGGCGGCCGCCGCGCAGCAGGCCGCGGAGACGAACGCGAAGC
GAGCGGAGGACGGCGGCGGTGGCGACAGGGTGACGCTCAGGGACGTGGTGGGCGGCGACG
CCGCGGCGGCGATGGCCGCCGACAAGGTGGCCACGAGGGAGGACGCCGAGAAGGTGGCGG
CTGCCGCGGCGCGCAACGTGGGGAAGGGGGCCGGCGGTGGCGTCGCCGAGGCTGTCGTGG
CGGCGGCGGATATGAACGAGGGGAGGATGATGTAACAGTGTAGTATATAGTTGACGTCTG
TACTTGTATCCTAGTACCGTTTTACGTGCGTTAATAATAAATTCGACTCGTTTGGACCGT
C