Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016998_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:182322273:182328409:-1 gene:Zm00001d016998 gene_biotype:protein_coding transcript_biotype:protein_coding description:18S pre-ribosomal assembly protein gar2-related
Sequence	ATGGACGATGAGCTGGACGGCGTGATGGCGTCGTCATCGGATGCGGTGCTTAGAACAACA CGAGAGTCATCGATGACCATGAGGTCCTCCTGCTTGACGATGTACAGTGTGGTGCAGCCG CCCTGGACCACGTCCAAGCGGCGGTTGCGCCGGAGCTTGTCGTACACAGCGGCGCATGCG GACACAGTTATGACACGGAAAATGGTAGAAGACAAGAGTTCATCACAAGACACGGTACAG AAAAGTGGGCATGCTGTACTTGGGAATGTTTCTTATGACAAGGATGTTGTGGAGATAAAA CTGGCAGACGCTATTGATTCCGATAACTACGTCGGTAATTTTGTCAAGGATGTCTGTGTC GATGACGGAGCACTGCTTCATCGGACGGCATCAGAAGAAAAACCAGTAGACAGAAGGTCA TCCCTAGATCTCAGTTGCCAAATGATCGGTGCAGATAGTGACATAAGCTACTACGGGAAG GAAGATCATTCTAGAACATCTGCGCACGAACTAAAACCAGAAGCAGTTGCACTTGCACCT CTTTGTAACATCGGTGCAGATAGTGGCAGAGAGTATGATCTTGAAGATCGGACCGGTACT GGTTCCATCGCAGGCAGTCCTGGTGAGAAGAAGATAAGTTTGCAAGAGCTGCTTCTCCTT GAAAGTGCAGAAGAGTCCCGAAATACAGGCGCAGTAAACTCCGAGAGCAGTGAAAAGCAT AAATGTCCTCTGAATGAAGAAGAAGCTGCACAGACTTCCAAGGACGGCGATCCTGACGCT GAGACTGTTTTGGCCAACACCTTTGAGCATATTAGTGATGGCATATCAAGTAAGGAGAAA GGCAGTGGTTGCCCAGCGACGATGGCTAGAGACCAGGTTGATACAGCTACGGCACTAGAT GTGCGAGAGCCACAGAAACTTGATCGGTACAACCCTTCCGTTGATCGTCGGTCACGAGAG TACACATCGGTGCCTGAGTGCTCTATACCAGGAATCACAGATGCTGCCTCCTCCACGGGT TCCATCTGCTCTTTTCACAACGCGACGAGCAGCACCGCAACCGCAGGCTTGGGTGAAGGT GAAACACTTGAACCAGGGGCGGATACTCTCAGCGCAGGCAGCTCAGACATCGGTTCATCT GAAAAGAGCCACGACAACCACAGCGGAAGTATGTTTAGCAAGCCAATCGCTGGTGCATAT GGGAATGGGAAGAAGCAAGAAAAACATGGTCAGATGGATGAGGAGCACGGCATAGGCACA GCAGACGACGCAGCCGCCAGTACGAGTTCTGCTTCTACCCTCGCGCAGGATGGCTCTGCG CCTGCGGTCCAAGAAACCGTGCCTGGTAGTAGTAGTAGTAGTTCGAGACCGGCAGCTCGC GCCGGTGACGACCCGGACCTCTCTGGTCCCAGTATAATGTCAGGCCCGGTGTCGATGTCG GGTCACATAGCATATTCTGGCAACGTCTCTCTCCGGTCAGATAGCAGCACGACTAGCACC CAGTCCTTTGCATTTCCAGTGTTGCAGAGGGAGTGGACCAGCAGCCCCGTCAGGATGGCG AAGGCAGAGCGCAGGCGCAGCGGTGGACGGCATCGCGTCTGGAGGAAAGGGATCATCTGC TGTAAATTCTGA

Peptide Sequence

PEP ID	Zm00001d016998_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:182322273:182328409:-1 gene:Zm00001d016998 transcript:Zm00001d016998_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:18S pre-ribosomal assembly protein gar2-related
Sequence	MDDELDGVMASSSDAVLRTTRESSMTMRSSCLTMYSVVQPPWTTSKRRLRRSLSYTAAHA DTVMTRKMVEDKSSSQDTVQKSGHAVLGNVSYDKDVVEIKLADAIDSDNYVGNFVKDVCV DDGALLHRTASEEKPVDRRSSLDLSCQMIGADSDISYYGKEDHSRTSAHELKPEAVALAP LCNIGADSGREYDLEDRTGTGSIAGSPGEKKISLQELLLLESAEESRNTGAVNSESSEKH KCPLNEEEAAQTSKDGDPDAETVLANTFEHISDGISSKEKGSGCPATMARDQVDTATALD VREPQKLDRYNPSVDRRSREYTSVPECSIPGITDAASSTGSICSFHNATSSTATAGLGEG ETLEPGADTLSAGSSDIGSSEKSHDNHSGSMFSKPIAGAYGNGKKQEKHGQMDEEHGIGT ADDAAASTSSASTLAQDGSAPAVQETVPGSSSSSSRPAARAGDDPDLSGPSIMSGPVSMS GHIAYSGNVSLRSDSSTTSTQSFAFPVLQREWTSSPVRMAKAERRRSGGRHRVWRKGIIC CKF

Transcript Sequence

Transcript ID	Zm00001d016998_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:182322273:182328409:-1 gene:Zm00001d016998 gene_biotype:protein_coding transcript_biotype:protein_coding description:18S pre-ribosomal assembly protein gar2-related
Sequence	ATGGACGATGAGCTGGACGGCGTGATGGCGTCGTCATCGGATGCGGTGCTTAGAACAACA CGAGAGTCATCGATGACCATGAGGTCCTCCTGCTTGACGATGTACAGTGTGGTGCAGCCG CCCTGGACCACGTCCAAGCGGCGGTTGCGCCGGAGCTTGTCGTACACAGCGGCGCATGCG GACACAGTTATGACACGGAAAATGGTAGAAGACAAGAGTTCATCACAAGACACGGTACAG AAAAGTGGGCATGCTGTACTTGGGAATGTTTCTTATGACAAGGATGTTGTGGAGATAAAA CTGGCAGACGCTATTGATTCCGATAACTACGTCGGTAATTTTGTCAAGGATGTCTGTGTC GATGACGGAGCACTGCTTCATCGGACGGCATCAGAAGAAAAACCAGTAGACAGAAGGTCA TCCCTAGATCTCAGTTGCCAAATGATCGGTGCAGATAGTGACATAAGCTACTACGGGAAG GAAGATCATTCTAGAACATCTGCGCACGAACTAAAACCAGAAGCAGTTGCACTTGCACCT CTTTGTAACATCGGTGCAGATAGTGGCAGAGAGTATGATCTTGAAGATCGGACCGGTACT GGTTCCATCGCAGGCAGTCCTGGTGAGAAGAAGATAAGTTTGCAAGAGCTGCTTCTCCTT GAAAGTGCAGAAGAGTCCCGAAATACAGGCGCAGTAAACTCCGAGAGCAGTGAAAAGCAT AAATGTCCTCTGAATGAAGAAGAAGCTGCACAGACTTCCAAGGACGGCGATCCTGACGCT GAGACTGTTTTGGCCAACACCTTTGAGCATATTAGTGATGGCATATCAAGTAAGGAGAAA GGCAGTGGTTGCCCAGCGACGATGGCTAGAGACCAGGTTGATACAGCTACGGCACTAGAT GTGCGAGAGCCACAGAAACTTGATCGGTACAACCCTTCCGTTGATCGTCGGTCACGAGAG TACACATCGGTGCCTGAGTGCTCTATACCAGGAATCACAGATGCTGCCTCCTCCACGGGT TCCATCTGCTCTTTTCACAACGCGACGAGCAGCACCGCAACCGCAGGCTTGGGTGAAGGT GAAACACTTGAACCAGGGGCGGATACTCTCAGCGCAGGCAGCTCAGACATCGGTTCATCT GAAAAGAGCCACGACAACCACAGCGGAAGTATGTTTAGCAAGCCAATCGCTGGTGCATAT GGGAATGGGAAGAAGCAAGAAAAACATGGTCAGATGGATGAGGAGCACGGCATAGGCACA GCAGACGACGCAGCCGCCAGTACGAGTTCTGCTTCTACCCTCGCGCAGGATGGCTCTGCG CCTGCGGTCCAAGAAACCGTGCCTGGTAGTAGTAGTAGTAGTTCGAGACCGGCAGCTCGC GCCGGTGACGACCCGGACCTCTCTGGTCCCAGTATAATGTCAGGCCCGGTGTCGATGTCG GGTCACATAGCATATTCTGGCAACGTCTCTCTCCGGTCAGATAGCAGCACGACTAGCACC CAGTCCTTTGCATTTCCAGTGTTGCAGAGGGAGTGGACCAGCAGCCCCGTCAGGATGGCG AAGGCAGAGCGCAGGCGCAGCGGTGGACGGCATCGCGTCTGGAGGAAAGGGATCATCTGC TGTAAATTCTGATCCAGCCACCTCCTTTCTTGACACCTCCTTCCTAGTGGCTTGACCGTT GAGTGACAAGGTGTGTATAGCTGTAGCGTAGTGACGGTTTTTTTGTTTTGTTTTGTTTTG TTTTTGTTTCCTCCGAGAATGTGCTTAAGTGCCCACGTTTTTCATTTGCTATTGTTATAA GGCAGTAGAGTAGTAGTGATCACGCTTGGCAGAGGTGATTAGTTTTGTACATCCTTTTGG TGGATTTAAATTAAA