Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016918_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:179887272:179893070:-1 gene:Zm00001d016918 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase

Sequence

ATGGCGAAGCTAGCGCGATCGCCAACGACCTCCCCGCCGGCGGCGGCCGCGGATAAGCAC
CGCTCCGCGGCCGGGTCGGGGCTCCGGTCCCTCGCCAGTGCCGCCTCCGGATGGTGGGAC
CGGTGGACGGTCATTGGTTCCGGACTCTCCAAGCTCGAAAGGGCCTTCGGCGACCAGTTC
CCCGAGGGCGAGCGCTACTTCGGGCTCGAGAACTTCGGCAACACCTGCTACTGCAACAGC
GTCCTCCAGATAAGTGCATCAAAGAAAAAGACTGGTGTTATTGCTCCAAAACGTTTCATT
CAAATGGTTAGGAAACTAAATGAATATTTTCGTGGCTACATGCATCAGGATGCCCATGAG
TTTTTGAATTTCTTACTGAATGAAATTGTTGATATTCTGGAAAAAGAGTCTAGTTCTGCA
AAGGATTCTCCTGGGACCACATCTTCTGAAAATGTCTCAAATGGCGCAGCTGTTGATGGA
GTTAGAAAAGAACCACTGGTTACATGGGTACATAAGAATTTTCAGGTTCGAAGTTTTGCT
GTACATGCACAGTTACCCTTTATCTTGCAGGGTATTTTGACCAATGAAACCAGATGCCTA
ATGTGTGAGACAATCACCGCAAAGGATGAGACATTTTTTGACTTGAGCGTCGACATTGAA
CAGAATAGTTCACTCACAAGCTGTCTGAAGAATTTCTTTTCTACTGAGACTTTAAATGCG
GATGACAAGTTCTTCTGTGATAAATGCTGCAGTTTGCAAGAAGCAGAGAAGAGAATGAAG
ATAAAAAAGGCGCCACAAATATTAGTGATCCACCTAAAGCGCTTCAAGTTCATCGAGCAG
CTTAACCGGCACAAGAAGCTGTCGTACCGAGTGGTGTACCCCTTGGAGCTTAAGCTCAGC
AGCAACTCCGCTGATGCCGACTGTGAGTACTCCCTCTTTGCCGTGGTGGTCCACCTGGGG
AGCGGCCCCAACCAGGGGCACTACGTAGCCATGATCAAGAGCCATGACCATTGGTTGTCC
TTCGATGATGACAATGTCGAGATGATCCCGGAGTCTACCCTACAGACCTTCTATGGCTCT
TATCATGAATATTCGGGCAACACTGATCATGGCTACATCTTGTTCTACGGGCGCATTGGT
GGGAGTGGAAATGAGAAGACCGACTCTTCCGATGGAGTGTGA

Peptide Sequence

PEP ID

Zm00001d016918_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:179887272:179893070:-1 gene:Zm00001d016918 transcript:Zm00001d016918_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase

Sequence

MAKLARSPTTSPPAAAADKHRSAAGSGLRSLASAASGWWDRWTVIGSGLSKLERAFGDQF
PEGERYFGLENFGNTCYCNSVLQISASKKKTGVIAPKRFIQMVRKLNEYFRGYMHQDAHE
FLNFLLNEIVDILEKESSSAKDSPGTTSSENVSNGAAVDGVRKEPLVTWVHKNFQVRSFA
VHAQLPFILQGILTNETRCLMCETITAKDETFFDLSVDIEQNSSLTSCLKNFFSTETLNA
DDKFFCDKCCSLQEAEKRMKIKKAPQILVIHLKRFKFIEQLNRHKKLSYRVVYPLELKLS
SNSADADCEYSLFAVVVHLGSGPNQGHYVAMIKSHDHWLSFDDDNVEMIPESTLQTFYGS
YHEYSGNTDHGYILFYGRIGGSGNEKTDSSDGV

Transcript Sequence

Transcript ID

Zm00001d016918_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:179887272:179893070:-1 gene:Zm00001d016918 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase

Sequence

GGAAAAAAAACATCGCAAGTTCGCGACAGAATAGTGACATCCTGAAGCAGTCAAGCACTC
AACCTCTCCTTCAGTCCTTCCCATCTCATCCTCCATCTCGATCTCTTCGCTCCGTCGAAC
TTTCACCTAGTCAGCCTGCCGCGCTACCCCTCCACCGCCGTCTCCACGCCCGTGGCCAAG
CCAGCGGAACCCTAGCATGGCGAAGCTAGCGCGATCGCCAACGACCTCCCCGCCGGCGGC
GGCCGCGGATAAGCACCGCTCCGCGGCCGGGTCGGGGCTCCGGTCCCTCGCCAGTGCCGC
CTCCGGATGGTGGGACCGGTGGACGGTCATTGGTTCCGGACTCTCCAAGCTCGAAAGGGC
CTTCGGCGACCAGTTCCCCGAGGGCGAGCGCTACTTCGGGCTCGAGAACTTCGGCAACAC
CTGCTACTGCAACAGCGTCCTCCAGATAAGTGCATCAAAGAAAAAGACTGGTGTTATTGC
TCCAAAACGTTTCATTCAAATGGTTAGGAAACTAAATGAATATTTTCGTGGCTACATGCA
TCAGGATGCCCATGAGTTTTTGAATTTCTTACTGAATGAAATTGTTGATATTCTGGAAAA
AGAGTCTAGTTCTGCAAAGGATTCTCCTGGGACCACATCTTCTGAAAATGTCTCAAATGG
CGCAGCTGTTGATGGAGTTAGAAAAGAACCACTGGTTACATGGGTACATAAGAATTTTCA
GGTTCGAAGTTTTGCTGTACATGCACAGTTACCCTTTATCTTGCAGGGTATTTTGACCAA
TGAAACCAGATGCCTAATGTGTGAGACAATCACCGCAAAGGATGAGACATTTTTTGACTT
GAGCGTCGACATTGAACAGAATAGTTCACTCACAAGCTGTCTGAAGAATTTCTTTTCTAC
TGAGACTTTAAATGCGGATGACAAGTTCTTCTGTGATAAATGCTGCAGTTTGCAAGAAGC
AGAGAAGAGAATGAAGATAAAAAAGGCGCCACAAATATTAGTGATCCACCTAAAGCGCTT
CAAGTTCATCGAGCAGCTTAACCGGCACAAGAAGCTGTCGTACCGAGTGGTGTACCCCTT
GGAGCTTAAGCTCAGCAGCAACTCCGCTGATGCCGACTGTGAGTACTCCCTCTTTGCCGT
GGTGGTCCACCTGGGGAGCGGCCCCAACCAGGGGCACTACGTAGCCATGATCAAGAGCCA
TGACCATTGGTTGTCCTTCGATGATGACAATGTCGAGATGATCCCGGAGTCTACCCTACA
GACCTTCTATGGCTCTTATCATGAATATTCGGGCAACACTGATCATGGCTACATCTTGTT
CTACGGGCGCATTGGTGGGAGTGGAAATGAGAAGACCGACTCTTCCGATGGAGTGTGACC
GTTGACATGGGATCCTGGGTGGTTCGATGTACATGGGCTTTCCTGGCCTTCGTATACTTC
GGTTGGATAGGATATATTTACATTTTCAACAAGAAAGTGTTTTTTTTGCGGAAGACCGTG
GGGGGAAAACATAAAAGTTTAGTTTGTTGTTAGTTGCAGTTCCTTGTAAAGGATTAGTTG
GCAGGTTAGTATATCATTTTATTTTGTTTTCATAATTCTAACTTGTCATCGGGACCACAT
TGCGCACGTTTTTTTTTTTTTGTGAAAAAGTCCTGTTCGGAAGCACTGATTTTTTTTGTT
TTGAGAAATTGATTTGTTGATG