Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016900_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:179634790:179635893:1 gene:Zm00001d016900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGTCACCCGGCTCCAACGACGACGACGACGACGACGGCCGCGCCTCCGCTGCCGCC
GCCGTCTGCTGCATGTGCGGCGACCAAGGGCTGCCGGGCGAGCTCTTCCAGTGCGCCCTC
TGCCTCCGGCGGCTGCAGCACAGATACTGCAGCGCCGAGTACCCAAGGACGGCGGCGTAC
TCGGTCTGCAACTGGTGCCTGACGACGACAGATAAGCAAGTCGGCGGAGGTTCGCCGGCG
GCGGCTAAGTCGCTTACGACGATGGCAAAACGGAGGGCGTCATCAAGGCAGCTGAACGGT
TCTCGTGGTGGCCATCATGGCGACGTGGATCCGTACTCTGGTGGTGGTGGTTCTGGCGGA
TGCTCGAGGTCAGCGTTCCCGGCGGAGCCCCAGAAGCCGGTCAAGAAGCCCAAGAAGAGC
CACGAGGGGGCGGCGGCAGCGAAAGGAAAGGAGGAGGTGCCGACCGGCGCTAGGACGAAG
CCGCCGTTCACTGCGAAGGCGCGAGTGCCGCGGTATAAGCTCCTCGCAGAGGTGATCAGA
TGA

Peptide Sequence

PEP ID

Zm00001d016900_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:179634790:179635893:1 gene:Zm00001d016900 transcript:Zm00001d016900_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVSPGSNDDDDDDGRASAAAAVCCMCGDQGLPGELFQCALCLRRLQHRYCSAEYPRTAAY
SVCNWCLTTTDKQVGGGSPAAAKSLTTMAKRRASSRQLNGSRGGHHGDVDPYSGGGGSGG
CSRSAFPAEPQKPVKKPKKSHEGAAAAKGKEEVPTGARTKPPFTAKARVPRYKLLAEVIR

Transcript Sequence

Transcript ID

Zm00001d016900_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:179634790:179635893:1 gene:Zm00001d016900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCAAACTCAATCTATAGGCTCGAGCCCATGGTGTCACCCGGCTCCAACGACGACGACGAC
GACGACGGCCGCGCCTCCGCTGCCGCCGCCGTCTGCTGCATGTGCGGCGACCAAGGGCTG
CCGGGCGAGCTCTTCCAGTGCGCCCTCTGCCTCCGGCGGCTGCAGCACAGATACTGCAGC
GCCGAGTACCCAAGGACGGCGGCGTACTCGGTCTGCAACTGGTGCCTGACGACGACAGAT
AAGCAAGTCGGCGGAGGTTCGCCGGCGGCGGCTAAGTCGCTTACGACGATGGCAAAACGG
AGGGCGTCATCAAGGCAGCTGAACGGTTCTCGTGGTGGCCATCATGGCGACGTGGATCCG
TACTCTGGTGGTGGTGGTTCTGGCGGATGCTCGAGGTCAGCGTTCCCGGCGGAGCCCCAG
AAGCCGGTCAAGAAGCCCAAGAAGAGCCACGAGGGGGCGGCGGCAGCGAAAGGAAAGGAG
GAGGTGCCGACCGGCGCTAGGACGAAGCCGCCGTTCACTGCGAAGGCGCGAGTGCCGCGG
TATAAGCTCCTCGCAGAGGTGATCAGATGAAATAATGAAAATAAATAAAACGGCGATGAA
TATCACTTGCAAGCCATTATTACTATTAGCTTGTGGAGAAAAGGTTTTAGGTCACTACTG
GATAATCCGATGATCGCCGCCGGAGCATCTGGTGGATTGAAGATAAACAAAAAAGAGTGC
AAGGGACAAAGAGATTGAACAACAATCCGCGGGGGCGGCGCAACGCCAATAATCGCCAAC
CTAGCTAGCCCCAGAATCGGACTGAGAACCGCGCTCGCGTCAGGCAGCTTTGCGTGGACC
CGATCTAAGAGATCGTGTATATGATCAAGAGTTGCTCAAAATAGTCTAAGACATGCATGC
TTAGCCTCC