Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016898_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:179623715:179628079:-1 gene:Zm00001d016898 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein Mutator sub-class
Sequence	ATGTGGGAGTCAGAGGGCGATTGCCATGCCGGTGAGCGCGAGCGCGGGCTCGTCCCTGTC GGCGGCGGCGGCTCCTCGGGCCGGTACGAGGCAGCGCTCAAGAACGACGGCTTTGTTCGA AGAGACCAGTCCTGGTATGTAAACAGCGATATTCCCAGCGATTTGCTTGTCAAAGTTGGA GATGTTAGCTTCCACCTTCACAAGTACCCGATGATCTCCCGGAGCGGGCGGATGAGCCGC GTGATCTACGAGACGGCGGCGGCGGCCCCGGACTCGGGCGCGGCGGCGGCGGTGGTGGTG GAGCTGGACGACGTCCCGGGCGGCGCGGACTCGTTCGAGCTGGCGGCGCGGTTCTGCTAC GGCATGGCGGTGGACCTGACGGCGGGCAACATCTCGGGGCTGCGCTGCGCCGCCGAGTAC CTGGAGATGACGGAGGAGCTGGAGGAAGGCAACCTCATCTTCAAGACGGAGGCGTTCCTC AGCTACGTGGTGCTGTCGTCGTGGCGGGACTCCATCGTGGTGCTCAAGACCTGCGAGGGC CTCTCGCCCTGGGCCGAGAACCTGCAGATCGTGCGCCGCTGCAGCGAGTCCATCGCCTGG AAGGCCTGCGCCAACCCGCGGGGCGTGCGCTGGGCCTACACCGGCGGCGGTGGGGGGAGG CCGATGCCGACCACCAGGGCAGGCGCCGGCGGCGGCACGGCGAGCCCCCGGTGGAACCTC GGCGGCGGCGGCGGGGACTCCAAGGAGTCGAGCCCGAGCCGGCAGGCCGTGCCGCCGCCG GACTGGTGGTTCGAGGACGTGTCCATGCTCCGGATCGACCACTTCGTGCGCGTCGTCACC GCCATCAAGGTCAAAGGCATGCGGTTCGATCTCATCGGCGCGTCCATCACCCACTACGCA TCCAAATGGCTCCCGGGTCTCACCAAGGACGGCCCGCACGGCGGCGCGCTGGAGGAGCCC TGGGCTCAGGCCCAGGCGTCCCCCGGCGGCGGGCTCCACATGATCATCGCCAGCGGCGGC GGCGGCGGCGGCGGCAAGGACGACATCGCCGGGAGCACGCCGGCGCGGGAGCAGCGCATG GTGGTGGAGAGCCTGATCAGCATCATCCCGCTGCAGCGCGACAGCGTCTCGTGCGGCTTC CTCCTCCGCCTGCTCCGCCTGGCCGTCATGCTGAAGGCCGCCCCGGCGCTGGTGACGGAG CTGGAGAAGCGCGTGGGCATGCAGCTCGAGCAGGCGGTGCTGGCCGACCTGCTCATCCCC TCCTACGGCCGCGCCGACACCGCCTACGACGTGGACCTCGTGCAGCGCCTCGTCGAGCAC TTCCTGGTGCAGGAGCAGACGGAGCTGCTGGCGTCGTCCAGCCCCGGCCGCGTGGAGCAG CCGCCGCTGCCCGAGTACTACGGCGCTAGGACGGCGGGCGCCGCGGCAGCGTCGGCGTCG GCGGGGCTGAACGCCAAGGCGCGCGTCGCCCGGCTGCTCGACAGCTACCTCTCCGAGGTG TCCCGCGACCGCAACCTGTCCCTGACGAAGTTCCAGGTGCTGGCCGAGTCGCTCCCGGAG TCGGCGCGCACCTGCGACGACGGTCTCTACCGAGCCGTCGACTCGTACCTCAAGGCAAGT CAAGCGCACCCGACGCTGACGGAGCACGAGCGGAAGCGTCTGTGCCGGGTGATGGACTGC CAGAAGCTGTCGCTGGACGCGTGCATGCACGCGGCGCAGAACGAGCGGCTGCCGCTGCGG GTGGTGGTCCAGGTGCTCTTCTCGGAGCAGGTGAAGATCAGCAACGCGCTGGCCAGCGGC TCGTCCTCCAACGCCGCCGCCGCCGCGCTGCTGGCCAACAAGGCGGCGGACGGCGTGGCG CCGCCGACGCGACGGCAGCTGCTGGACGGCACGCCGCAGTCGTTCCAGGAAGGGTGGGCG GCGGCGAAGAAGGACATCAACACGCTGAAGCTGGAGCTGGAGAGCATGAAGGCCAAGTAC CTGGAGCTGCAGCACGAGATGGACGCGCTCCAGAAGCTGGTGGAGCGCGGCGCGCCGTCG CCCCTGGCGGCGGGGCTCAAGGCAACCGGCGGAGGCGTTGGTAGCAAGAATCACAGCCAG GGGCCCTCGGCGTGGAGCAGCGGGTGGAAGAAGCTGGGCAGGCTGGCCAAGATGACCGGC GGCGACGCGGCGGGGCATGACGGGCACGTGCCGGGAGCGCCCGGAGAGGCGCCGAGGAAG CCGCGGAGGTGGAGAAACTCCATCTCGTGA

Peptide Sequence

PEP ID	Zm00001d016898_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:179623715:179628079:-1 gene:Zm00001d016898 transcript:Zm00001d016898_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein Mutator sub-class
Sequence	MWESEGDCHAGERERGLVPVGGGGSSGRYEAALKNDGFVRRDQSWYVNSDIPSDLLVKVG DVSFHLHKYPMISRSGRMSRVIYETAAAAPDSGAAAAVVVELDDVPGGADSFELAARFCY GMAVDLTAGNISGLRCAAEYLEMTEELEEGNLIFKTEAFLSYVVLSSWRDSIVVLKTCEG LSPWAENLQIVRRCSESIAWKACANPRGVRWAYTGGGGGRPMPTTRAGAGGGTASPRWNL GGGGGDSKESSPSRQAVPPPDWWFEDVSMLRIDHFVRVVTAIKVKGMRFDLIGASITHYA SKWLPGLTKDGPHGGALEEPWAQAQASPGGGLHMIIASGGGGGGGKDDIAGSTPAREQRM VVESLISIIPLQRDSVSCGFLLRLLRLAVMLKAAPALVTELEKRVGMQLEQAVLADLLIP SYGRADTAYDVDLVQRLVEHFLVQEQTELLASSSPGRVEQPPLPEYYGARTAGAAAASAS AGLNAKARVARLLDSYLSEVSRDRNLSLTKFQVLAESLPESARTCDDGLYRAVDSYLKAS QAHPTLTEHERKRLCRVMDCQKLSLDACMHAAQNERLPLRVVVQVLFSEQVKISNALASG SSSNAAAAALLANKAADGVAPPTRRQLLDGTPQSFQEGWAAAKKDINTLKLELESMKAKY LELQHEMDALQKLVERGAPSPLAAGLKATGGGVGSKNHSQGPSAWSSGWKKLGRLAKMTG GDAAGHDGHVPGAPGEAPRKPRRWRNSIS

Transcript Sequence

Transcript ID	Zm00001d016898_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:179623715:179628079:-1 gene:Zm00001d016898 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein Mutator sub-class
Sequence	TATATACACGCACACACACAAGCTTCTGTAGTCGTTCAGTCAAGGCGAGGCGAGCGTCGA TTGAAGACGATGTGGGAGTCAGAGGGCGATTGCCATGCCGGTGAGCGCGAGCGCGGGCTC GTCCCTGTCGGCGGCGGCGGCTCCTCGGGCCGGTACGAGGCAGCGCTCAAGAACGACGGC TTTGTTCGAAGAGACCAGTCCTGGTATGTAAACAGCGATATTCCCAGCGATTTGCTTGTC AAAGTTGGAGATGTTAGCTTCCACCTTCACAAGTACCCGATGATCTCCCGGAGCGGGCGG ATGAGCCGCGTGATCTACGAGACGGCGGCGGCGGCCCCGGACTCGGGCGCGGCGGCGGCG GTGGTGGTGGAGCTGGACGACGTCCCGGGCGGCGCGGACTCGTTCGAGCTGGCGGCGCGG TTCTGCTACGGCATGGCGGTGGACCTGACGGCGGGCAACATCTCGGGGCTGCGCTGCGCC GCCGAGTACCTGGAGATGACGGAGGAGCTGGAGGAAGGCAACCTCATCTTCAAGACGGAG GCGTTCCTCAGCTACGTGGTGCTGTCGTCGTGGCGGGACTCCATCGTGGTGCTCAAGACC TGCGAGGGCCTCTCGCCCTGGGCCGAGAACCTGCAGATCGTGCGCCGCTGCAGCGAGTCC ATCGCCTGGAAGGCCTGCGCCAACCCGCGGGGCGTGCGCTGGGCCTACACCGGCGGCGGT GGGGGGAGGCCGATGCCGACCACCAGGGCAGGCGCCGGCGGCGGCACGGCGAGCCCCCGG TGGAACCTCGGCGGCGGCGGCGGGGACTCCAAGGAGTCGAGCCCGAGCCGGCAGGCCGTG CCGCCGCCGGACTGGTGGTTCGAGGACGTGTCCATGCTCCGGATCGACCACTTCGTGCGC GTCGTCACCGCCATCAAGGTCAAAGGCATGCGGTTCGATCTCATCGGCGCGTCCATCACC CACTACGCATCCAAATGGCTCCCGGGTCTCACCAAGGACGGCCCGCACGGCGGCGCGCTG GAGGAGCCCTGGGCTCAGGCCCAGGCGTCCCCCGGCGGCGGGCTCCACATGATCATCGCC AGCGGCGGCGGCGGCGGCGGCGGCAAGGACGACATCGCCGGGAGCACGCCGGCGCGGGAG CAGCGCATGGTGGTGGAGAGCCTGATCAGCATCATCCCGCTGCAGCGCGACAGCGTCTCG TGCGGCTTCCTCCTCCGCCTGCTCCGCCTGGCCGTCATGCTGAAGGCCGCCCCGGCGCTG GTGACGGAGCTGGAGAAGCGCGTGGGCATGCAGCTCGAGCAGGCGGTGCTGGCCGACCTG CTCATCCCCTCCTACGGCCGCGCCGACACCGCCTACGACGTGGACCTCGTGCAGCGCCTC GTCGAGCACTTCCTGGTGCAGGAGCAGACGGAGCTGCTGGCGTCGTCCAGCCCCGGCCGC GTGGAGCAGCCGCCGCTGCCCGAGTACTACGGCGCTAGGACGGCGGGCGCCGCGGCAGCG TCGGCGTCGGCGGGGCTGAACGCCAAGGCGCGCGTCGCCCGGCTGCTCGACAGCTACCTC TCCGAGGTGTCCCGCGACCGCAACCTGTCCCTGACGAAGTTCCAGGTGCTGGCCGAGTCG CTCCCGGAGTCGGCGCGCACCTGCGACGACGGTCTCTACCGAGCCGTCGACTCGTACCTC AAGGCAAGTCAAGCGCACCCGACGCTGACGGAGCACGAGCGGAAGCGTCTGTGCCGGGTG ATGGACTGCCAGAAGCTGTCGCTGGACGCGTGCATGCACGCGGCGCAGAACGAGCGGCTG CCGCTGCGGGTGGTGGTCCAGGTGCTCTTCTCGGAGCAGGTGAAGATCAGCAACGCGCTG GCCAGCGGCTCGTCCTCCAACGCCGCCGCCGCCGCGCTGCTGGCCAACAAGGCGGCGGAC GGCGTGGCGCCGCCGACGCGACGGCAGCTGCTGGACGGCACGCCGCAGTCGTTCCAGGAA GGGTGGGCGGCGGCGAAGAAGGACATCAACACGCTGAAGCTGGAGCTGGAGAGCATGAAG GCCAAGTACCTGGAGCTGCAGCACGAGATGGACGCGCTCCAGAAGCTGGTGGAGCGCGGC GCGCCGTCGCCCCTGGCGGCGGGGCTCAAGGCAACCGGCGGAGGCGTTGGTAGCAAGAAT CACAGCCAGGGGCCCTCGGCGTGGAGCAGCGGGTGGAAGAAGCTGGGCAGGCTGGCCAAG ATGACCGGCGGCGACGCGGCGGGGCATGACGGGCACGTGCCGGGAGCGCCCGGAGAGGCG CCGAGGAAGCCGCGGAGGTGGAGAAACTCCATCTCGTGAGCAGCTGCAGAGCAGAGTAGA GACGACGGAGCCCCGGTGGCGGTGGAATCAGCTTGTTTCGTAGCGAGCAGAGTAGGCGGC CTAGTAACTTGTGTAACACCCATTTTCATGCATGCAGTTCCGAGATTGAAAAACAAAGCA GAGTGGCCGAGACCGAGATTGCGCGCGTGCAGGCTGCAGACTGTCCTAGGAGAAGAAGAT CGTCTCGTCTATTTCCAGTTCCAGTGTGCTGCATTTGCCGTGTTGTCATCTGTTTTGTTT ATGAACAGAATTAACAGGGTTGAGATGCGATCGAACCAGA