Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016894_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:5:179482255:179486609:-1 gene:Zm00001d016894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 12
Sequence	ATGTCTTCGCGCTCGGGGTCCACGGGCGGAGGGAGCACCGGCGGCGGCAGCAGCGCGGGG GGAGGCGGCGCGGTGCCGCTGGCCGTGCTGCTCAGGCGGGAGGTGGCCAGCGAGCGCACC GCGTCGGAGCGCCCGGAGCTGCACTGGGGCCTCTTCAGCCAGGCCAAGAAGGGCGAGGAC TTCACCTTCCTCAAGCCCGAATGCGAGCGCGTCCCTGACGTCCCGTCCTCCTCCTTCTCC GCCTTCGGCCTGTTTGATGGGCATAATGGGAACGGAGCCGCAATTTACACCAAGGAGAAT CTCTTGAACAACATCTTGAGTGCGGTCCCAGCCGATCTGAACAGGGAAGACTGGCTTGCT GCACTCCCAAGAGCGCTGGTTGCTGCATTCGTCAAAACCGATAAGGATTTCCAGACTAAA GCACGTTCTTCAGGGACAACTGTGACATTTGTCATAATAGATGGATTGGTCATCACTGTT GCATCAGTTGGTGATTCCCGTTGTGTACTACAAGCTGAAGGTTCAATTTATCATCTATCC TCTGATCATCGGTTCGATGCAAGCAAAGAGGAGGTTGATCGTGTAACAGAATGCGGAGGT GATGTTGGAAGGCTAAATGTTGTTGGTGGTGCTGAGATTGGCCCCCTTAGATGTTGGCCT GGAGGTTTGTGCCTATCAAGGTCAATTGGAGATCAAGATGTTGGTGAATTTATCGTTCCA GTTCCTCTTGTGAAGCAAGTTAAGCTATCTACTGCGGGTGGCCGACTCATTATTGCAAGT GATGGTGTTTGGGATGTCTTGTCTCCAGAAGTAGCTTTTAACTGTTCACGTGAACTTCCT CCAGTGCCTGCAGCTGAGCAAATCGTTAAAACTGCTGTGCAATCAAAAGGGCTGAGGGAT GATACCACCTGTATTGTTGTTGATATAATAGTAGAAAAAAACAACTCTTCCATGCCACTT GCTAAAAGGCAACCAGGAATTGGTGTCTTCAAAAATATGTTCGGCAAGAAAAAATCATCG GATTCATCATCCCATTCCCATTCAGATAGAGAATATATGGATCCAGATAACGTGGAGGAA ATATTTGAGGATGGGTGTGCGCTTCTTTCTAGACGGCTGGATTCTGAATACCCTGTTCGA AATATGTTCAAACTGTTCATATGTGCCATTTGTCAAGTAGAGTTAAAGCCAAACCAAGGT ATATCTGTACATGAAGATTCATCACAACCTGGGAGCTTGCGTCGCTGGGATGGTCCATTC CTTTGCCAGAGCTGTCAGGAAAAGAAAGAAGCAATGGAGGGAAAGCGTCGTTCACGAGAT TCATCAAGAAACAGTGGGTAA

Peptide Sequence

PEP ID	Zm00001d016894_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:5:179482255:179486609:-1 gene:Zm00001d016894 transcript:Zm00001d016894_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 12
Sequence	MSSRSGSTGGGSTGGGSSAGGGGAVPLAVLLRREVASERTASERPELHWGLFSQAKKGED FTFLKPECERVPDVPSSSFSAFGLFDGHNGNGAAIYTKENLLNNILSAVPADLNREDWLA ALPRALVAAFVKTDKDFQTKARSSGTTVTFVIIDGLVITVASVGDSRCVLQAEGSIYHLS SDHRFDASKEEVDRVTECGGDVGRLNVVGGAEIGPLRCWPGGLCLSRSIGDQDVGEFIVP VPLVKQVKLSTAGGRLIIASDGVWDVLSPEVAFNCSRELPPVPAAEQIVKTAVQSKGLRD DTTCIVVDIIVEKNNSSMPLAKRQPGIGVFKNMFGKKKSSDSSSHSHSDREYMDPDNVEE IFEDGCALLSRRLDSEYPVRNMFKLFICAICQVELKPNQGISVHEDSSQPGSLRRWDGPF LCQSCQEKKEAMEGKRRSRDSSRNSG

Transcript Sequence

Transcript ID	Zm00001d016894_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:179482255:179486609:-1 gene:Zm00001d016894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 12
Sequence	TCCAACCCGCCACGCGCATGTGACCCATCCGATCCGACCACCCTCTCCTCTCCTCTCTTC CTCTTCCTCTTCGTCGCACCACCACCACCACCACCCTCCCTCTCCTCGCCTCCCAAAAAA GAGAGAGGCACGGGGACCGCCCGCCTCGCTCGCCTGCGCACCGGATTCGTCGCTGCGGCG GTGGTTGCAGCGGCGGCGGCCTGGCGGGGAGATGTCTTCGCGCTCGGGGTCCACGGGCGG AGGGAGCACCGGCGGCGGCAGCAGCGCGGGGGGAGGCGGCGCGGTGCCGCTGGCCGTGCT GCTCAGGCGGGAGGTGGCCAGCGAGCGCACCGCGTCGGAGCGCCCGGAGCTGCACTGGGG CCTCTTCAGCCAGGCCAAGAAGGGCGAGGACTTCACCTTCCTCAAGCCCGAATGCGAGCG CGTCCCTGACGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCCTGTTTGATGGGCATAATGG GAACGGAGCCGCAATTTACACCAAGGAGAATCTCTTGAACAACATCTTGAGTGCGGTCCC AGCCGATCTGAACAGGGAAGACTGGCTTGCTGCACTCCCAAGAGCGCTGGTTGCTGCATT CGTCAAAACCGATAAGGATTTCCAGACTAAAGCACGTTCTTCAGGGACAACTGTGACATT TGTCATAATAGATGGATTGGTCATCACTGTTGCATCAGTTGGTGATTCCCGTTGTGTACT ACAAGCTGAAGGTTCAATTTATCATCTATCCTCTGATCATCGGTTCGATGCAAGCAAAGA GGAGGTTGATCGTGTAACAGAATGCGGAGGTGATGTTGGAAGGCTAAATGTTGTTGGTGG TGCTGAGATTGGCCCCCTTAGATGTTGGCCTGGAGGTTTGTGCCTATCAAGGTCAATTGG AGATCAAGATGTTGGTGAATTTATCGTTCCAGTTCCTCTTGTGAAGCAAGTTAAGCTATC TACTGCGGGTGGCCGACTCATTATTGCAAGTGATGGTGTTTGGGATGTCTTGTCTCCAGA AGTAGCTTTTAACTGTTCACGTGAACTTCCTCCAGTGCCTGCAGCTGAGCAAATCGTTAA AACTGCTGTGCAATCAAAAGGGCTGAGGGATGATACCACCTGTATTGTTGTTGATATAAT AGTAGAAAAAAACAACTCTTCCATGCCACTTGCTAAAAGGCAACCAGGAATTGGTGTCTT CAAAAATATGTTCGGCAAGAAAAAATCATCGGATTCATCATCCCATTCCCATTCAGATAG AGAATATATGGATCCAGATAACGTGGAGGAAATATTTGAGGATGGGTGTGCGCTTCTTTC TAGACGGCTGGATTCTGAATACCCTGTTCGAAATATGTTCAAACTGTTCATATGTGCCAT TTGTCAAGTAGAGTTAAAGCCAAACCAAGGTATATCTGTACATGAAGATTCATCACAACC TGGGAGCTTGCGTCGCTGGGATGGTCCATTCCTTTGCCAGAGCTGTCAGGAAAAGAAAGA AGCAATGGAGGGAAAGCGTCGTTCACGAGATTCATCAAGAAACAGTGGGTAAGTGAATAG TTGACATGTGTAGAGTGATCAGAACTAGATTGAAGTATTGAATTGCTACTGTGGAGGTGG CTGCTGCTTATAGCTCTCATCCCAAGTGAGGAGCATGCCTTGTCCTCAGCAAGGTCCTTG CCCAGGAATGTAGGCAGCTTTACTCAGCCCTTTGACCTTGATGGCACATACAGGTTGAAA GATTAACGATGCCAAAATGATATGGCTTGTATATTCTAAGGTCCATTGCTGCGACGATCT TCTTATAGAGTTCTGACAAATAGCTATGGCACTGTTTCTGAATTAGAACTAGGCGCTTAC ATCAATTCTTCCCCGTTCGAGCTAGCCTTAATTTATGGCTAGAGACCTTAGTATTATCAG TCCTGCTGAGGTCCAGCCTTCGCTGACACCAATGTAATTGTCATCTAAAATATTCTTTCA AGCAGCTGTGATTCATCAGTAAGACATTAGTTGTCATGTACAATGTACAAAATCTTGCTA ACAAGACAGATCTGTTTCG