Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016879_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:179261829:179264286:-1 gene:Zm00001d016879 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein kinase

Sequence

ATGTCTTGCTGCGGTGGCGCCGAGGAGGACAGCTACGGCCCGCCGGCCAACCAGGCGGTC
CCACCACCCAACGCCAACGCCCCCGGTAACAGAGGCGGTCCGAGGGGGCCGGGCGCGCCC
AGGGTCGGCGGCCCCGCAAAGCCCATCAGCATCGACGCGCCCTCCATACCCTTGGACGAG
CTAAAGAAGATCACCAACAACTTCAGCGAGCGCGCCCTCATCGGCGAGGGCTCCTACGGC
CGCGTCTACAACGCCACGCTCGGCGACGGCCGCGCCGCCGTCATCAAGAAGCTCGACACC
AGCGCCTCGCAGGACTCCGACACCGACTTCTCCGCGCAGATAGCCATGGTCTCCAAGCTC
AAGAACGAGTATTTCCTGGAGCTCCTGGGGTACTGCTTGGAGGACGGCAACCGGATGGTA
GCCTACCAGTTCGCCACGATGGGTTCCTTGCATAACATACTACACGGGAAGAAAGGAGTC
CAGGGCGCGGAGCCCGGCCCCGTCCTCAACTGGGCTCAGCGCGTGAAGATAGCCTACGGA
GCCGCGAGAGGTCTGGAGTACCTGCACGAGAAGGTGCAGCCGTCGATCGTCCACCGGGAC
ATCCGCTCCAGCAACGTCCTCATCTTCGACGATTTCAGCTCCAAGATCGCCGACTTCAAC
CTCACCAACCAGGGCACCGACACAGCCGCGCGCTTGCACTCTACTCGTGTGCTGGGGACC
TTTGGGTACCATGCTCCAGAATACGCCATGACAGGCCAGATCAACCAGAAGAGCGACGTC
TACAGTTTCGGTGTGATCCTTCTGGAGCTACTCACCGGGCGGAAGCCAGTCGACCACACC
ATGCCGAAAGGCCAGCAAAGCCTTGTTACCTGGGCCACTCCAAGGTTGAGCGAAGACAAA
GTGAAGCAGTGTGTCGATCCGAAGCTCAACAGCGACTACCCTCCAAAGGCGGTTGCAAAG
CTGGCGGCGGTTGCAGCGCTGTGCGTTCAGTACGAGTCCGACTTCCGGCCAAACATGACC
ATCGTGGTGAAGGCGATCACGCCTCTCCTGAACGCACCTAAACCGGCTGCTCCGGCCGCG
CCGCAATCCTGA

Peptide Sequence

PEP ID

Zm00001d016879_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:179261829:179264286:-1 gene:Zm00001d016879 transcript:Zm00001d016879_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein kinase

Sequence

MSCCGGAEEDSYGPPANQAVPPPNANAPGNRGGPRGPGAPRVGGPAKPISIDAPSIPLDE
LKKITNNFSERALIGEGSYGRVYNATLGDGRAAVIKKLDTSASQDSDTDFSAQIAMVSKL
KNEYFLELLGYCLEDGNRMVAYQFATMGSLHNILHGKKGVQGAEPGPVLNWAQRVKIAYG
AARGLEYLHEKVQPSIVHRDIRSSNVLIFDDFSSKIADFNLTNQGTDTAARLHSTRVLGT
FGYHAPEYAMTGQINQKSDVYSFGVILLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDK
VKQCVDPKLNSDYPPKAVAKLAAVAALCVQYESDFRPNMTIVVKAITPLLNAPKPAAPAA
PQS

Transcript Sequence

Transcript ID

Zm00001d016879_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:179261829:179264286:-1 gene:Zm00001d016879 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein kinase

Sequence

CTGCGGCCGGTCACCAACGCCGGTTGCTGCTGTTCTCGCGCGCTCCCCGCCTCTTCTTCT
CTTCTAGGTGCCGTCGGAGCTTGCTTTTGGGGAGGTCGTGCGGCATGATCTGCTGACCGA
CCCCAAATCAACCCGGCCGCGCCGCGCATCGATCGTCGTCATCCAGTCCGGCGAAGGTGG
AGAGGAACCGAGAAATTAAAGATGTCTTGCTGCGGTGGCGCCGAGGAGGACAGCTACGGC
CCGCCGGCCAACCAGGCGGTCCCACCACCCAACGCCAACGCCCCCGGTAACAGAGGCGGT
CCGAGGGGGCCGGGCGCGCCCAGGGTCGGCGGCCCCGCAAAGCCCATCAGCATCGACGCG
CCCTCCATACCCTTGGACGAGCTAAAGAAGATCACCAACAACTTCAGCGAGCGCGCCCTC
ATCGGCGAGGGCTCCTACGGCCGCGTCTACAACGCCACGCTCGGCGACGGCCGCGCCGCC
GTCATCAAGAAGCTCGACACCAGCGCCTCGCAGGACTCCGACACCGACTTCTCCGCGCAG
ATAGCCATGGTCTCCAAGCTCAAGAACGAGTATTTCCTGGAGCTCCTGGGGTACTGCTTG
GAGGACGGCAACCGGATGGTAGCCTACCAGTTCGCCACGATGGGTTCCTTGCATAACATA
CTACACGGGAAGAAAGGAGTCCAGGGCGCGGAGCCCGGCCCCGTCCTCAACTGGGCTCAG
CGCGTGAAGATAGCCTACGGAGCCGCGAGAGGTCTGGAGTACCTGCACGAGAAGGTGCAG
CCGTCGATCGTCCACCGGGACATCCGCTCCAGCAACGTCCTCATCTTCGACGATTTCAGC
TCCAAGATCGCCGACTTCAACCTCACCAACCAGGGCACCGACACAGCCGCGCGCTTGCAC
TCTACTCGTGTGCTGGGGACCTTTGGGTACCATGCTCCAGAATACGCCATGACAGGCCAG
ATCAACCAGAAGAGCGACGTCTACAGTTTCGGTGTGATCCTTCTGGAGCTACTCACCGGG
CGGAAGCCAGTCGACCACACCATGCCGAAAGGCCAGCAAAGCCTTGTTACCTGGGCCACT
CCAAGGTTGAGCGAAGACAAAGTGAAGCAGTGTGTCGATCCGAAGCTCAACAGCGACTAC
CCTCCAAAGGCGGTTGCAAAGCTGGCGGCGGTTGCAGCGCTGTGCGTTCAGTACGAGTCC
GACTTCCGGCCAAACATGACCATCGTGGTGAAGGCGATCACGCCTCTCCTGAACGCACCT
AAACCGGCTGCTCCGGCCGCGCCGCAATCCTGATCAACCAACCAGCCAGATGACAGAATT
TAGCCAACACCGCGGTTTCCCTCTGTTTCTGATCATAGATATGTGTTTCAAGGAACCGCG
CATCCTTGCTCCATCCATCCAGCGCTTATGCTTCTGTAAAGGAAAAAACAACACTGATCT
GCTGGTGCTGCAGGACACATATAGGGGAATTTTTAAAAATGTTAATCTGCTACTCTGAAT
TCGTGTGCTTCTTGCTGTAAGTTTGTGTTATACCATGTGCAGTTTTAGAGAGTACACATG
CAGTTTCTAGCTACAAAAGTAGGCACGACGATGGTTTCCAGCTTTTCCAAATATAAAACA
AATTCACAGCCACAGCTACAGGAGTGCATCAGATCAAGATAGTATTGGCTCTTTTTC