Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016866_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:178641620:178646428:-1 gene:Zm00001d016866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic pyranopterin monophosphate synthase mitochondrial
Sequence

ATGATGCGACGCTGCGTCTCGGCGTTGGCCCGCCGCCGCCGTCCAGATCGCACGGTTGAT
ACTATGAAGGCACGATTCCAATGTTTGGTTAACATTTCCTCTTCAATAAGGGACACTGAC
AGCCAAAGGTGCTCAAGTACGTGTGCTACTTCCTGTGCTACCGATCCAGATGTTTTATCG
AGAGAAACATCGTCATCAGAAATGCTTGTTGATTCATTTGGGAGGTTCCACAATTACTTG
AGGATCTCCTTGACCGAGCGCTGTAATCTGAGGTGCCAGTACTGTATGCCTGCTGAAGGA
GTTGAACTAACACCAAAGTCAGAGCTTCTGTCACATGATGAGATAATTCGAATCGCTGAC
CTTTTTGTTACTTCTGGTGTGAATAAGATCCGATTAATTGGTGGAGAACCTACCGTACGA
AAAGATATTGAAGATATTTGTTTGCATCTTTCTAGTTTGAAGGGACTGAAAACTCTTGCA
ATGACCACAAATGGAATTGTTCTTTCAAAGAAACTCCCAAAGTTGAAAGAATGTGGACTC
AATGCTTTAAATATAAGTTTAGATACACTAGTACCTGCAAAGTTTGAGTTCATGACAAGG
CGTAAAGGGCACTCAAAGGTCTTGGAATCAATAGATGCTGCTGTAGAACTTGGGTATAGC
CCTGTTAAGGTCAACTGTGTCATCATGCGTGGTATAAATGATGATGAGATCTGCAATTTT
GTTGAATTGACGAGACACAAGCCCATCAACGTTAGATTTATTGAGTTTATGCCATTTGAT
GGTAATGTTTGGAATGTGAAGAAGCTAGTTCCTTATGCAGAGATGTTGGACAAAGTGCGG
CAAAGTTATAAAGGAGTAGAGAGACTTCAAGATCACCCCACAGACACTGCAAAGAATTTC
AGGATTGATGGACATGTTGGCACTATTTCATTTATTACATCAATGACAGAGCATTTTTGT
GCTGGCTGCAATAGATTACGGTTATTGGCTGATGGAAACCTCAAGGTGTGCTTATTTGGC
CCCTCAGAGGTAAGTTTGAGAGAACCCATCCGTACTGGTGTTGATGACGCTGGACTGAAG
GAGATAATTGGTGCCGCGGTTAAAAGGAAGAAAGCTAAACATGCCGGGATGTTTGATATT
GCCAAGACAGCAAATAGACCCATGATACATATAGGTGGCTGA

Peptide Sequence

PEP ID

Zm00001d016866_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:178641620:178646428:-1 gene:Zm00001d016866 transcript:Zm00001d016866_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic pyranopterin monophosphate synthase mitochondrial
Sequence

MMRRCVSALARRRRPDRTVDTMKARFQCLVNISSSIRDTDSQRCSSTCATSCATDPDVLS
RETSSSEMLVDSFGRFHNYLRISLTERCNLRCQYCMPAEGVELTPKSELLSHDEIIRIAD
LFVTSGVNKIRLIGGEPTVRKDIEDICLHLSSLKGLKTLAMTTNGIVLSKKLPKLKECGL
NALNISLDTLVPAKFEFMTRRKGHSKVLESIDAAVELGYSPVKVNCVIMRGINDDEICNF
VELTRHKPINVRFIEFMPFDGNVWNVKKLVPYAEMLDKVRQSYKGVERLQDHPTDTAKNF
RIDGHVGTISFITSMTEHFCAGCNRLRLLADGNLKVCLFGPSEVSLREPIRTGVDDAGLK
EIIGAAVKRKKAKHAGMFDIAKTANRPMIHIGG

Transcript Sequence

Transcript ID

Zm00001d016866_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:178641620:178646428:-1 gene:Zm00001d016866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic pyranopterin monophosphate synthase mitochondrial
Sequence

CACCAGAGCGCCAAGAAGGGAAGGTTGGCTTCTCCTTCCTACCCTTTCCGCGCTGCAACC
GCCAAATTCTCCGACTGCCTCGCACTCTCGCAGCACGTGGGGGGTGATTCTCTCTTTCTT
CTCTTCCTCAGCCGCCAGGAAGGTGGATTCTTTTCGAGCTCTTGCCCAGCTGATTATAGG
TAGGTACGTGGCTGGATAGACCCTACTGCTGGATAGAGCGTCTCAGGGACGGGTTGACTC
TTTCTGGCCGCATCAGCGGCCGGCTATTCTTCTTGTCCGGCTATCCGTTCCAGGACTTCG
GATTAAGAGGCGACGAGATGATGCGACGCTGCGTCTCGGCGTTGGCCCGCCGCCGCCGTC
CAGATCGCACGGTTGATACTATGAAGGCACGATTCCAATGTTTGGTTAACATTTCCTCTT
CAATAAGGGACACTGACAGCCAAAGGTGCTCAAGTACGTGTGCTACTTCCTGTGCTACCG
ATCCAGATGTTTTATCGAGAGAAACATCGTCATCAGAAATGCTTGTTGATTCATTTGGGA
GGTTCCACAATTACTTGAGGATCTCCTTGACCGAGCGCTGTAATCTGAGGTGCCAGTACT
GTATGCCTGCTGAAGGAGTTGAACTAACACCAAAGTCAGAGCTTCTGTCACATGATGAGA
TAATTCGAATCGCTGACCTTTTTGTTACTTCTGGTGTGAATAAGATCCGATTAATTGGTG
GAGAACCTACCGTACGAAAAGATATTGAAGATATTTGTTTGCATCTTTCTAGTTTGAAGG
GACTGAAAACTCTTGCAATGACCACAAATGGAATTGTTCTTTCAAAGAAACTCCCAAAGT
TGAAAGAATGTGGACTCAATGCTTTAAATATAAGTTTAGATACACTAGTACCTGCAAAGT
TTGAGTTCATGACAAGGCGTAAAGGGCACTCAAAGGTCTTGGAATCAATAGATGCTGCTG
TAGAACTTGGGTATAGCCCTGTTAAGGTCAACTGTGTCATCATGCGTGGTATAAATGATG
ATGAGATCTGCAATTTTGTTGAATTGACGAGACACAAGCCCATCAACGTTAGATTTATTG
AGTTTATGCCATTTGATGGTAATGTTTGGAATGTGAAGAAGCTAGTTCCTTATGCAGAGA
TGTTGGACAAAGTGCGGCAAAGTTATAAAGGAGTAGAGAGACTTCAAGATCACCCCACAG
ACACTGCAAAGAATTTCAGGATTGATGGACATGTTGGCACTATTTCATTTATTACATCAA
TGACAGAGCATTTTTGTGCTGGCTGCAATAGATTACGGTTATTGGCTGATGGAAACCTCA
AGGTGTGCTTATTTGGCCCCTCAGAGGTAAGTTTGAGAGAACCCATCCGTACTGGTGTTG
ATGACGCTGGACTGAAGGAGATAATTGGTGCCGCGGTTAAAAGGAAGAAAGCTAAACATG
CCGGGATGTTTGATATTGCCAAGACAGCAAATAGACCCATGATACATATAGGTGGCTGAG
GTGTGCAGAATTTCCTCATGTCGAATATGAGCCAATAAAATGGATTTGCCAACTGCTGGG
TTGCTGCCTGGTTTTACCTGAACGACCATGAAAAAGTTCTCTGATGCAATGGACCAAACT
CTTTCCGAGTGGTTTAAACATTAGAGGAGGAAGTGGAGTGTATTGGTCACTGCAGTCATA
CAATTTAGATCCGTATACTTGAACAAATGAACAGTGTCACAGAAACTCACTCAGTCTTCG
CGTGCCAAGGTGTTTTGGTTGTGTACTTGTATGTTGTATGCTCATAATGTCACGTTGTGT
AAGCTCTCTTTTGAGATCTCACCGTTTGTGAATTAAACTGCTACCTTGAGAT