Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016856_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:5:178415092:178420870:1 gene:Zm00001d016856 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calmodulin binding protein1 description: calmodulin binding protein1
Sequence

ATGGAAGAAATCTTCAGCTCCAGTTCAGAAGTCAGTTGGCTCTTCCAATCTTCACTGGTG
GAAAAGTTGAAGGGTGACTTTAGTAAAGAGGAAGATGAGGATTGGACAGAAGAAGAGTTT
GAAAGTAATATTGTCAAGGAGCGTGAAGGGAAGAGGCCTCTTTTGACAGGCGACCTGCAA
GTGACTCTTAAAGAAGGTGTTGGAACCATAGGGGAGCTTACATTCACTGACAACTCCAGC
TGGATAAGAAGCAGGAAATTCAGACTTGGGCTGAGGATTGCTCCTGGCTTTTGTGAAGGT
ATCCGTGTCCGAGAAGCCAAGACAGAAGCTTTCCCCGTTAAGGATCACAGAGGAGAATTG
TACAAGAAGCACTACCCACCTGCGCTGAAGGATGATGTTTGGAGATTAGAAAAGATTGGC
AAGGATGGCGCATTCCACAAGAAGTTAAATGCCAGTGGGATCTATACAGTTGAAGATTTC
CTCCGGCTTCTTGTTAGGGATCAGCAGAGATTACGTAGCATTCTGGGCAGTGGAATGTCA
AATAAGATGTGGGACAGCCTTGTTGAGCATGCAAAGACATGTGTCTTAAGTGGAAAGCAT
TATGTATACTATGCTAGAGACTCAAGAAACGTGGGTGCAATATTCAATAACATCTACGAG
TTCACTGGTTTGATTGCCGATGATCAGTTCATTTCAGCTGAAAATCTCACAGACAACCAG
AAGGTCTATGCTGATGCATTGGTAAAGAAAGCATATGAGGACTGGATGCAAGTTGTAGAA
TATGATGGCAAGGCACTCTTGAGCTTCAAGCAGAAAAAGAAAACTGTCACGACAAGAAGT
GACGTTGCATCTGCCTCAACAAGCAATCCTGCTTCATATGGTTCGGCCAATTCACAGAAA
CAGTTGTCTCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGCA
GATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGATATGCAGCCAAC
ACTCAGAGCATTCCTGCAAACGTCGGCATGCAATACGACGGGAGTGCAGTGTCGCCTGAA
ATCCAGTTTAGTGGTTCATCCCTTCAGAGTCAGTCTTCAAGAGGGTCCAACATGCTAGCA
TTGGGCCCTCCGCAGCAACATCAAAGTTTCGAATTCCCAGCGCTCGGCCAGCCCGTTCAG
CCAACAGGCCTGAACCCTTTCGAAGAGTGGCCGCAGCAGCAGGAGAACCGTGGCGGCGGT
GTCGACGACTACCTGATGGAGGAGATCCGGATGAGGAGCCACGAGATCCTGGAAAACGAA
GAGATGCAGCAGATGTTGCGGCTCCTGAGCATGGGCGGTGCCGGAACCAGCCTAGCCGAA
GACGGCTTCAATTTCCCTCCGTACATGCCTGCGCCTTCGCCGAACGTGAGCTACGAGGAC
GACCGCACCCGCGCGCCCGGGAAAGCCGTCGTCGGGTGGCTCAAGATCAAGGCTGCCATG
CGGTGGGGCATCTTTGTGAGGAAGAAGGCGGCTGAGAGAAGAGCTCAGCTTGTTGAGCTA
GACGACTAG

Peptide Sequence

PEP ID

Zm00001d016856_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:5:178415092:178420870:1 gene:Zm00001d016856 transcript:Zm00001d016856_T010 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calmodulin binding protein1 description: calmodulin binding protein1
Sequence

MEEIFSSSSEVSWLFQSSLVEKLKGDFSKEEDEDWTEEEFESNIVKEREGKRPLLTGDLQ
VTLKEGVGTIGELTFTDNSSWIRSRKFRLGLRIAPGFCEGIRVREAKTEAFPVKDHRGEL
YKKHYPPALKDDVWRLEKIGKDGAFHKKLNASGIYTVEDFLRLLVRDQQRLRSILGSGMS
NKMWDSLVEHAKTCVLSGKHYVYYARDSRNVGAIFNNIYEFTGLIADDQFISAENLTDNQ
KVYADALVKKAYEDWMQVVEYDGKALLSFKQKKKTVTTRSDVASASTSNPASYGSANSQK
QLSLPAKAGQTSSAGTMNEADGTRNAYNANGNQSARYAANTQSIPANVGMQYDGSAVSPE
IQFSGSSLQSQSSRGSNMLALGPPQQHQSFEFPALGQPVQPTGLNPFEEWPQQQENRGGG
VDDYLMEEIRMRSHEILENEEMQQMLRLLSMGGAGTSLAEDGFNFPPYMPAPSPNVSYED
DRTRAPGKAVVGWLKIKAAMRWGIFVRKKAAERRAQLVELDD

Transcript Sequence

Transcript ID

Zm00001d016856_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:178415092:178420870:1 gene:Zm00001d016856 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calmodulin binding protein1 description: calmodulin binding protein1
Sequence

CAGCGGTCGGGGTCCAAGCGCGGGCTGGAACCCACCGGTGGCGGCGACGACGACGACCAT
GCGCCCAAGCGCCCGCGCGTCCCCGCCCTCGCTAGTGTCATTGTGGAAGCTCTCAAGATG
GACAGTTTGCAGAAACTCTGTTCATCGCTTGAGCCTATTCTCCGAAGAGTTGTAAGTGAA
GAAGTAGAGCGTGCTTTAGCCAAACTGGGTCCTGCTAGAATCCAAGGAAGATCCTCCCCT
AAAAGAATTGAAGGCCCTGATGGAAGAAATCTTCAGCTCCAGTTCAGAAGTCAGTTGGCT
CTTCCAATCTTCACTGGTGGAAAAGTTGAAGGGTGACTTTAGTAAAGAGGAAGATGAGGA
TTGGACAGAAGAAGAGTTTGAAAGTAATATTGTCAAGGAGCGTGAAGGGAAGAGGCCTCT
TTTGACAGGCGACCTGCAAGTGACTCTTAAAGAAGGTGTTGGAACCATAGGGGAGCTTAC
ATTCACTGACAACTCCAGCTGGATAAGAAGCAGGAAATTCAGACTTGGGCTGAGGATTGC
TCCTGGCTTTTGTGAAGGTATCCGTGTCCGAGAAGCCAAGACAGAAGCTTTCCCCGTTAA
GGATCACAGAGGAGAATTGTACAAGAAGCACTACCCACCTGCGCTGAAGGATGATGTTTG
GAGATTAGAAAAGATTGGCAAGGATGGCGCATTCCACAAGAAGTTAAATGCCAGTGGGAT
CTATACAGTTGAAGATTTCCTCCGGCTTCTTGTTAGGGATCAGCAGAGATTACGTAGCAT
TCTGGGCAGTGGAATGTCAAATAAGATGTGGGACAGCCTTGTTGAGCATGCAAAGACATG
TGTCTTAAGTGGAAAGCATTATGTATACTATGCTAGAGACTCAAGAAACGTGGGTGCAAT
ATTCAATAACATCTACGAGTTCACTGGTTTGATTGCCGATGATCAGTTCATTTCAGCTGA
AAATCTCACAGACAACCAGAAGGTCTATGCTGATGCATTGGTAAAGAAAGCATATGAGGA
CTGGATGCAAGTTGTAGAATATGATGGCAAGGCACTCTTGAGCTTCAAGCAGAAAAAGAA
AACTGTCACGACAAGAAGTGACGTTGCATCTGCCTCAACAAGCAATCCTGCTTCATATGG
TTCGGCCAATTCACAGAAACAGTTGTCTCTTCCAGCAAAAGCTGGACAAACTTCCTCAGC
GGGTACTATGAATGAAGCAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTC
AGCAAGATATGCAGCCAACACTCAGAGCATTCCTGCAAACGTCGGCATGCAATACGACGG
GAGTGCAGTGTCGCCTGAAATCCAGTTTAGTGGTTCATCCCTTCAGAGTCAGTCTTCAAG
AGGGTCCAACATGCTAGCATTGGGCCCTCCGCAGCAACATCAAAGTTTCGAATTCCCAGC
GCTCGGCCAGCCCGTTCAGCCAACAGGCCTGAACCCTTTCGAAGAGTGGCCGCAGCAGCA
GGAGAACCGTGGCGGCGGTGTCGACGACTACCTGATGGAGGAGATCCGGATGAGGAGCCA
CGAGATCCTGGAAAACGAAGAGATGCAGCAGATGTTGCGGCTCCTGAGCATGGGCGGTGC
CGGAACCAGCCTAGCCGAAGACGGCTTCAATTTCCCTCCGTACATGCCTGCGCCTTCGCC
GAACGTGAGCTACGAGGACGACCGCACCCGCGCGCCCGGGAAAGCCGTCGTCGGGTGGCT
CAAGATCAAGGCTGCCATGCGGTGGGGCATCTTTGTGAGGAAGAAGGCGGCTGAGAGAAG
AGCTCAGCTTGTTGAGCTAGACGACTAGAAAGTATTGAACCCTCGAGCTGTTCATGTACC
AGAGTTTTCATTGTTGATGGTGTTTGTGGATCCGGACGGGGCTCGGCTATGGCCCTGCCC
CTTAGGAGGACAGCAGTTCTGGTCCTGAGCTTAATTCTGGACAAAACTATTTTC