Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016846_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:178246358:178249905:-1 gene:Zm00001d016846 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGGCGGCCTCTGCTCCAAGGAGGGCGTCGTGGAGGCGCCGCCCCCCGCGCCCCGCCAC CCCGTGTCGCAGCTGCAGAAGGCGTCGAGTCAGTCCCTGAAGCAGCTCATCACGCTCACC GCCAAGGAGGAGGAGAACGCCGTCGCCGCCCGGACGGAATCCAACGCCAAGGTCAACGGC GGTATCGGCATCGGCGCGCCCGCGCCGGCCAAAGGGTCCGTGGAGAAGACCGCGCCTCCC GTCGTGGTCATCACGTCCCTCAGCAAGTCCTACAGCACCGCCGGGGCGCCCACGCACCAC CGGTGCGTCACGGTGGACGTCGGCGGGAGCAACACCCCGGCGGCCGCGGACTGCGGCGAG CAGGTGATCTCCAGCGTGCCGCAGGGGTTCTCCGGCGAGCACGTCATCGCCGGGTGGCCC TCCTGGCTCACGTCCGTGGCCGGGGAGATCGTCGAGGGCTGGCTGCCCCGGCGCGCCGAC ACGTTCGAGCGGCTGGACAAGATCGGGCAGGGCACGTACAGCAACGTGTACAAGGCGCGG GACCTGCAGAGCGGCAAGATCGTGGCGCTGAAGCGGGTGCGCTTCGTCAACATGGACCCG GACAGCGTGCGGTTCATGGCGCGGGAGATCCACATCCTCCGGCGGCTGGACCACCCCAAC GTGATCAGGCTGGAGGGCATCGTCACCTCGCGCCTCTCGCACAGCCTCTACCTCGTCTTC GAGTACATGGAGCACGACCTCGCCGGCCTCGCCGCGCTGTCCGGCCAGCGCTTCACGGAG CCGCAGGTCAAGTGCCTCATGCGCCAGATCCTCGAGGGCCTGAGCCACTGCCACGCGCGG AGCGTCCTGCACCGGGATATCAAGGGCTCCAACCTCCTCATCGACGACAACGGCCTGCTC CGGATCGCCGACTTCGGGCTCGCCACCTTCTTCGACCCTGGCAAGCGGCAGCCCATGACC AGCCGCGTCGTCACGCTCTGGTACCGCCCGCCGGAGCTCCTGCTCGGCGCAACCGAGTAC GGCGTCGCCGTAGACCTGTGGAGCACCGGCTGCATCCTTGCCGAGCTGCTCGCGGGCAAG CCCATCATGCCCGGCCAGACCGAGATCGAGCAGCTGCACAAGATCTTCAAGCTTTGTGGC TCGCCGTCCGAGGACTACTGGGCCAAGGCGAAGCTACCGGACGTGACGCTCTTCAAGCCG CAGCGGCCGTACCGGCGCAAGATCGCCGAGACGTTCAAGGACTTCCCGCCCTCGGCCCTG GCGCTCCTGGACACGCTGCTCGCCATCGAGCCGTCGGCACGGGGCACGGTGGCCTCTGCT CTGGACAGCGAGTTCTTCAGGACCAAGCCGCTGGCGTGTGATCCGGCGAGCCTGCCCAAG TACCCGCCGTGCAAGGAGTACGACGCCAAGCTCCGAGGCCAGGAGGTCAGCAGGCAAAAC GCAGCGGGCCTCGGAGGCAAGGGCTCTGTATCCGTCAAACCGGGGAGAGACGACGCCAAG GGCGCCGCGCCAGCTCAGGACGCCATTGCCGACTACCAGCGGAGGCACAGGCAGGCGCGC GCCAACCAGAAGAGCACCAGCCACCACTACAGCTCGCAGGAGGACAGCGTGCCGGGCTTC CGCATCGAGCCGCCGCCACCGGGCATGGCCGTGGCCGCGGCCGCGCGCGGGCCGGCGACG CTGCAGGCCGGCGGGTTCGGGTCGACGTGGTACAGGAGCGACCCTCGGGCGGTCCCCCGC GCGTCCAGCTCCGTCAGGGCGGCCGCGTCGCACCTCACCTCGCAGCGGTCCTACGCGCAG TCCAGGGGCACCGACCTGCACCCGAGCTCGTCGGCCGCCAGCGCCAGCAACGCCAACCCC AGGTACAATCGGCTCGACGTCGCGGAGCCGGCCAGCGGCGTGGGCCGCCCCGGCTCCTCC TCCCACCAGAAGGACTTCGGCATGAGGGACGCGTCCGCCGGTTTCGGAGGGAGGAACAAG AGGATGCATTACTCGGGGCCGCTGGTGCCGCCCGGCGGCAACATGGATGACATGCTCAAG GAGCACGAGAGGCAGATCCAGCAGGCCGTGCGCAAGGCGCGGGTCGAGAAGGAGAAGACC AACAGGCACCATTACTAA

Peptide Sequence

PEP ID	Zm00001d016846_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:178246358:178249905:-1 gene:Zm00001d016846 transcript:Zm00001d016846_T002 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MGGLCSKEGVVEAPPPAPRHPVSQLQKASSQSLKQLITLTAKEEENAVAARTESNAKVNG GIGIGAPAPAKGSVEKTAPPVVVITSLSKSYSTAGAPTHHRCVTVDVGGSNTPAAADCGE QVISSVPQGFSGEHVIAGWPSWLTSVAGEIVEGWLPRRADTFERLDKIGQGTYSNVYKAR DLQSGKIVALKRVRFVNMDPDSVRFMAREIHILRRLDHPNVIRLEGIVTSRLSHSLYLVF EYMEHDLAGLAALSGQRFTEPQVKCLMRQILEGLSHCHARSVLHRDIKGSNLLIDDNGLL RIADFGLATFFDPGKRQPMTSRVVTLWYRPPELLLGATEYGVAVDLWSTGCILAELLAGK PIMPGQTEIEQLHKIFKLCGSPSEDYWAKAKLPDVTLFKPQRPYRRKIAETFKDFPPSAL ALLDTLLAIEPSARGTVASALDSEFFRTKPLACDPASLPKYPPCKEYDAKLRGQEVSRQN AAGLGGKGSVSVKPGRDDAKGAAPAQDAIADYQRRHRQARANQKSTSHHYSSQEDSVPGF RIEPPPPGMAVAAAARGPATLQAGGFGSTWYRSDPRAVPRASSSVRAAASHLTSQRSYAQ SRGTDLHPSSSAASASNANPRYNRLDVAEPASGVGRPGSSSHQKDFGMRDASAGFGGRNK RMHYSGPLVPPGGNMDDMLKEHERQIQQAVRKARVEKEKTNRHHY

Transcript Sequence

Transcript ID	Zm00001d016846_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:178246358:178249905:-1 gene:Zm00001d016846 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	GGCCTGGCCTAAGCCTAATTGGGGCGCACGTCCCCCGTCTGTCGTGCGCGCCACTACCCC ACCTGGCCACCTCAGCTCCACGCCTCCACCACACCAGCTCCCCTTCGTTTATTCGTAACG GCTCGTCGTCCCCGAGCCTCCCTTTTGTCTCCCGCGGTCCCGCCCCATTCGCTCTCTGTC GCTCCCGCGCGCGCGCAGCTGTCCGGCTCCGGCCCCGGCGCCGGATACGCGCGCGTGCCC GTGTTCAGTTGAGGCGGTTGCAACCGCGTGTCGCCGCAACCGCCATGCCTCCACCGCCAG CTCATCCCTCTTCGCGCCAGGACCAACGACGCCGCTTCCCCCGCTTCCTGGCCTCCTAGC TGACCTTCCTTCCCTGCATCCTCATCCTCCTGCGAAGGTTCTAACTTAGCGCGGAGGCCG CCGGCTCCGGGCGATGGGCGGCCTCTGCTCCAAGGAGGGCGTCGTGGAGGCGCCGCCCCC CGCGCCCCGCCACCCCGTGTCGCAGCTGCAGAAGGCGTCGAGTCAGTCCCTGAAGCAGCT CATCACGCTCACCGCCAAGGAGGAGGAGAACGCCGTCGCCGCCCGGACGGAATCCAACGC CAAGGTCAACGGCGGTATCGGCATCGGCGCGCCCGCGCCGGCCAAAGGGTCCGTGGAGAA GACCGCGCCTCCCGTCGTGGTCATCACGTCCCTCAGCAAGTCCTACAGCACCGCCGGGGC GCCCACGCACCACCGGTGCGTCACGGTGGACGTCGGCGGGAGCAACACCCCGGCGGCCGC GGACTGCGGCGAGCAGGTGATCTCCAGCGTGCCGCAGGGGTTCTCCGGCGAGCACGTCAT CGCCGGGTGGCCCTCCTGGCTCACGTCCGTGGCCGGGGAGATCGTCGAGGGCTGGCTGCC CCGGCGCGCCGACACGTTCGAGCGGCTGGACAAGATCGGGCAGGGCACGTACAGCAACGT GTACAAGGCGCGGGACCTGCAGAGCGGCAAGATCGTGGCGCTGAAGCGGGTGCGCTTCGT CAACATGGACCCGGACAGCGTGCGGTTCATGGCGCGGGAGATCCACATCCTCCGGCGGCT GGACCACCCCAACGTGATCAGGCTGGAGGGCATCGTCACCTCGCGCCTCTCGCACAGCCT CTACCTCGTCTTCGAGTACATGGAGCACGACCTCGCCGGCCTCGCCGCGCTGTCCGGCCA GCGCTTCACGGAGCCGCAGGTCAAGTGCCTCATGCGCCAGATCCTCGAGGGCCTGAGCCA CTGCCACGCGCGGAGCGTCCTGCACCGGGATATCAAGGGCTCCAACCTCCTCATCGACGA CAACGGCCTGCTCCGGATCGCCGACTTCGGGCTCGCCACCTTCTTCGACCCTGGCAAGCG GCAGCCCATGACCAGCCGCGTCGTCACGCTCTGGTACCGCCCGCCGGAGCTCCTGCTCGG CGCAACCGAGTACGGCGTCGCCGTAGACCTGTGGAGCACCGGCTGCATCCTTGCCGAGCT GCTCGCGGGCAAGCCCATCATGCCCGGCCAGACCGAGATCGAGCAGCTGCACAAGATCTT CAAGCTTTGTGGCTCGCCGTCCGAGGACTACTGGGCCAAGGCGAAGCTACCGGACGTGAC GCTCTTCAAGCCGCAGCGGCCGTACCGGCGCAAGATCGCCGAGACGTTCAAGGACTTCCC GCCCTCGGCCCTGGCGCTCCTGGACACGCTGCTCGCCATCGAGCCGTCGGCACGGGGCAC GGTGGCCTCTGCTCTGGACAGCGAGTTCTTCAGGACCAAGCCGCTGGCGTGTGATCCGGC GAGCCTGCCCAAGTACCCGCCGTGCAAGGAGTACGACGCCAAGCTCCGAGGCCAGGAGGT CAGCAGGCAAAACGCAGCGGGCCTCGGAGGCAAGGGCTCTGTATCCGTCAAACCGGGGAG AGACGACGCCAAGGGCGCCGCGCCAGCTCAGGACGCCATTGCCGACTACCAGCGGAGGCA CAGGCAGGCGCGCGCCAACCAGAAGAGCACCAGCCACCACTACAGCTCGCAGGAGGACAG CGTGCCGGGCTTCCGCATCGAGCCGCCGCCACCGGGCATGGCCGTGGCCGCGGCCGCGCG CGGGCCGGCGACGCTGCAGGCCGGCGGGTTCGGGTCGACGTGGTACAGGAGCGACCCTCG GGCGGTCCCCCGCGCGTCCAGCTCCGTCAGGGCGGCCGCGTCGCACCTCACCTCGCAGCG GTCCTACGCGCAGTCCAGGGGCACCGACCTGCACCCGAGCTCGTCGGCCGCCAGCGCCAG CAACGCCAACCCCAGGTACAATCGGCTCGACGTCGCGGAGCCGGCCAGCGGCGTGGGCCG CCCCGGCTCCTCCTCCCACCAGAAGGACTTCGGCATGAGGGACGCGTCCGCCGGTTTCGG AGGGAGGAACAAGAGGATGCATTACTCGGGGCCGCTGGTGCCGCCCGGCGGCAACATGGA TGACATGCTCAAGGAGCACGAGAGGCAGATCCAGCAGGCCGTGCGCAAGGCGCGGGTCGA GAAGGAGAAGACCAACAGGCACCATTACTAAACGATGAGGGAAAAAAAACAATTGGCATC AAGTAAGCGAATGAATCCCATGGTCTCAGACCACCAGAGCATTCGTTACCTCTCCATGGA AATGGAATGGAACAGGGGCCGCGAGACCATCGGTGACCGCAGCCTTGCGCTCGGGGCAGC TACGCTACGGCTCGGGCTCGGGCTTTTCTTGGTCCATCGGAGAGGCAGCATGACACTGAT AGGGAGGATACTGTAAAGACACCCCAAAAGGAAATGTGTTCGACTTTAACAGCGTAGTTA TCATAGCTCCAGGCTTACAAGGTTTGCAAGATTCAGAACAAACTCTGCATGCGCCAAACG TGTAGTGTAGCAGAATAGTTGCAAAATGCTGGTCAAACAGTGCGCGTAGACGTCGGTGGC CGCCAGCAGAGTTCAGAACACAAGTCTATATGTTCAGTGAGGACTGGAACCCATCACAAA ATCTTCCAAAATCACAACAAAATAAGAACCACTAATGTTTTAC