Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016822_T025
CDS Infomation	cds chromosome:B73_RefGen_v4:5:177266398:177285902:1 gene:Zm00001d016822 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phosphatase SAC6
Sequence	ATGAATCTAGTTCAAGACTTGCCATCACGTGGATCCACTACAAAACATAAAGTTCAAACA GTATATGGTGTGATAGGAGTACTCAAACTTGCAGTTGGATCATATTTTGTGGTGATCACG GATCGTGATTGTGTGGGATCCTACTTTGGACACGCAATTTTTAAAGTGACAGGACTAAAA ATTCTTCCCTGCAATAATGCACATAACACCACCTCTACTGATCAGAAAAAAATGGAAACA AAATTCTCGGAGCTCCTGGATTCTGCAGAGAGGACTATTGGCCTTCACTTTTCCTATGAT ATCAACCTAACACTTTCTGCACAGAGGCTACATGATCTCGGCGATGAATATAGAGCTCTT CCTCTTTGGAGACAGGCAGAACCAAGATTTCTATGGAATGGCTACTTGTTAGAACCTCTA ATTGAGAACAAGCTGAACCAGTACTTATTGCCAGTAATTCAAGGCAGTTTTCAAAATATC CAAGCAGAAGTTGGATCAGAGATGGTAAATGTGACCCTGATTGCACGTAGGTGCACACGA AGGATAGGTACTCGAATGTGGAGACGAGGAGCTGATGCAGAGGGTTATGCTGCAAACTTC GTTGAATCGGAGCAGATAATGCAGTCAAAAGGGTTTACAGCATCCTATGTACAAGTCCGA GGTTCTATGCCATTCTTGTGGGAGCAGATTGTTGATTTGACATACAAACCTAGTTTTGAC ATTGTTAGACAAGAGGAAGCGCCTCGTGTACTTGAGAGGCACTTCCATGATTTGCAAAAG AAATATGGAGCTGTCTTAGCCGTTGATCTTGTCAATACAGGTGGCGGTGAGGGCCGCCTC CGTGAAAGATATGCAAAATCTATTGAACCTATTCTTAGTGAAGATCTAAGATATGTGCAC TTCGACTTCCACCGAATTTGTGGCCATATTCACTTTGAGCGTCTGTCTCAGCTGTATGAT CAGATCAAGGACTACCTTCAGAAACATAAGTACTTCCTTATAAATGATAAAGGAGAGAAA ATTGAGGAGCAGACTGGCACTACAAGAACAAATTGTATAGATTGTTTGGATCGCACCAAT GTAACTCAGAGCATGATTGGTCGAAAAATTCTGGAAAGCCAACTTCAACGTATAGGAGTT CTTGGTGCTGGTGATACAATAAGCAAACATCCAACCTTTGATACAAACTACAAAATTTTG TGGGCCAATCATGGAGATGCAATAAGCATTCAGTACTCTGGAACTCCTGCTCTGAAGGGA GATTTTGTTCGGTATGGGAAGCGAACTACTCAAGGAATTCTGAATGATTTGAGGAATGCA CTTGGTAGATACTACCTGAATAACTTCGTTGATGGGACTAAGCAGGATGCCATGGATCTT CTTCAAGGACATTACATGACATCTGTTAGTAGAGATATGGCAGTGCCAAGCAAAGCAGGA CTTCTGCAGAGTTATGCGTCCTTCCGCCTTGCTTTTGCATTGGTTATGGGAGCTCTAATG TTCATGTTGATGTCACTGAGACAGGCCCGGAATGATGTTCGTCATTTGTTGCTGTCACTT ATGTGGGCTGGTCTTTGTATTGGCATCACACATTTTGTTAGAGCCAATGGTCGCACGTTC ACTAACCAACCTAGGTTTCACAAGTCACGCCATTGA

Peptide Sequence

PEP ID	Zm00001d016822_P025
PEP Infomation	pep chromosome:B73_RefGen_v4:5:177266398:177285902:1 gene:Zm00001d016822 transcript:Zm00001d016822_T025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phosphatase SAC6
Sequence	MNLVQDLPSRGSTTKHKVQTVYGVIGVLKLAVGSYFVVITDRDCVGSYFGHAIFKVTGLK ILPCNNAHNTTSTDQKKMETKFSELLDSAERTIGLHFSYDINLTLSAQRLHDLGDEYRAL PLWRQAEPRFLWNGYLLEPLIENKLNQYLLPVIQGSFQNIQAEVGSEMVNVTLIARRCTR RIGTRMWRRGADAEGYAANFVESEQIMQSKGFTASYVQVRGSMPFLWEQIVDLTYKPSFD IVRQEEAPRVLERHFHDLQKKYGAVLAVDLVNTGGGEGRLRERYAKSIEPILSEDLRYVH FDFHRICGHIHFERLSQLYDQIKDYLQKHKYFLINDKGEKIEEQTGTTRTNCIDCLDRTN VTQSMIGRKILESQLQRIGVLGAGDTISKHPTFDTNYKILWANHGDAISIQYSGTPALKG DFVRYGKRTTQGILNDLRNALGRYYLNNFVDGTKQDAMDLLQGHYMTSVSRDMAVPSKAG LLQSYASFRLAFALVMGALMFMLMSLRQARNDVRHLLLSLMWAGLCIGITHFVRANGRTF TNQPRFHKSRH

Transcript Sequence

Transcript ID	Zm00001d016822_T025
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:177266398:177285902:1 gene:Zm00001d016822 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phosphatase SAC6
Sequence	ACAAATGATGCCAGCCCTTCGTCGAAACTCCATACAAGATTGAGACTCTGGGAGTTTCCT GACTGTTATGTATTTGAACCAATTGATGGCCTTGCTGACTTGTACCTATCAGTTAGCCGG ACCAGCGGAACAATGAATCTAGTTCAAGACTTGCCATCACGTGGATCCACTACAAAACAT AAAGTTCAAACAGTATATGGTGTGATAGGAGTACTCAAACTTGCAGTTGGATCATATTTT GTGGTGATCACGGATCGTGATTGTGTGGGATCCTACTTTGGACACGCAATTTTTAAAGTG ACAGGACTAAAAATTCTTCCCTGCAATAATGCACATAACACCACCTCTACTGATCAGAAA AAAATGGAAACAAAATTCTCGGAGCTCCTGGATTCTGCAGAGAGGACTATTGGCCTTCAC TTTTCCTATGATATCAACCTAACACTTTCTGCACAGAGGCTACATGATCTCGGCGATGAA TATAGAGCTCTTCCTCTTTGGAGACAGGCAGAACCAAGATTTCTATGGAATGGCTACTTG TTAGAACCTCTAATTGAGAACAAGCTGAACCAGTACTTATTGCCAGTAATTCAAGGCAGT TTTCAAAATATCCAAGCAGAAGTTGGATCAGAGATGGTAAATGTGACCCTGATTGCACGT AGGTGCACACGAAGGATAGGTACTCGAATGTGGAGACGAGGAGCTGATGCAGAGGGTTAT GCTGCAAACTTCGTTGAATCGGAGCAGATAATGCAGTCAAAAGGGTTTACAGCATCCTAT GTACAAGTCCGAGGTTCTATGCCATTCTTGTGGGAGCAGATTGTTGATTTGACATACAAA CCTAGTTTTGACATTGTTAGACAAGAGGAAGCGCCTCGTGTACTTGAGAGGCACTTCCAT GATTTGCAAAAGAAATATGGAGCTGTCTTAGCCGTTGATCTTGTCAATACAGGTGGCGGT GAGGGCCGCCTCCGTGAAAGATATGCAAAATCTATTGAACCTATTCTTAGTGAAGATCTA AGATATGTGCACTTCGACTTCCACCGAATTTGTGGCCATATTCACTTTGAGCGTCTGTCT CAGCTGTATGATCAGATCAAGGACTACCTTCAGAAACATAAGTACTTCCTTATAAATGAT AAAGGAGAGAAAATTGAGGAGCAGACTGGCACTACAAGAACAAATTGTATAGATTGTTTG GATCGCACCAATGTAACTCAGAGCATGATTGGTCGAAAAATTCTGGAAAGCCAACTTCAA CGTATAGGAGTTCTTGGTGCTGGTGATACAATAAGCAAACATCCAACCTTTGATACAAAC TACAAAATTTTGTGGGCCAATCATGGAGATGCAATAAGCATTCAGTACTCTGGAACTCCT GCTCTGAAGGGAGATTTTGTTCGGTATGGGAAGCGAACTACTCAAGGAATTCTGAATGAT TTGAGGAATGCACTTGGTAGATACTACCTGAATAACTTCGTTGATGGGACTAAGCAGGAT GCCATGGATCTTCTTCAAGGACATTACATGACATCTGTTAGTAGAGATATGGCAGTGCCA AGCAAAGCAGGACTTCTGCAGAGTTATGCGTCCTTCCGCCTTGCTTTTGCATTGGTTATG GGAGCTCTAATGTTCATGTTGATGTCACTGAGACAGGCCCGGAATGATGTTCGTCATTTG TTGCTGTCACTTATGTGGGCTGGTCTTTGTATTGGCATCACACATTTTGTTAGAGCCAAT GGTCGCACGTTCACTAACCAACCTAGGTTTCACAAGTCACGCCATTGATGGTTGCAAGAT GACCAATTTGCTCGTCAAGCGGCCTCATAGATTATCATCATCCATCAAACTTGTTGACAC AGATTGGTTCACATGAAGTGTTGCGTTTTTTTGGCACGGTATTTACCCTTTTGTAATAAG GTTTCTTCCATTTTGTAACAAGTTTTTGTTTCCTCGTCGCCTACTTTTGCTTCATAGTGT TCTGGACATCATGGTCTTTGTTAGAATTTACTTGTAAAAATCAAGTGAATATGCCTTCAG CACATATTATTGTATTATGATTTGTTCATGCTACAAACGAAGTGAATACACCTTTTGTGA TTTGTTCATTTG