Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016805_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:176720309:176723469:-1 gene:Zm00001d016805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence

ATGGTGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTCCCCATCGAC
CTCACGAGCCTCTTCTTCTCGCTCCGCCGCCTCTCGCTCGAGTCCATGGACGACCTCGAC
ACCTGCCCCGACTTCGACGCCGTCACGCCGCATAGCCTCGACGCCACCCCCGCCGGCCCG
GAGACCGCGCGCGGCGCCTCCCTCGGATCTAATCCTTTTGAGGACCAGGTGTTTGATCCC
ATTCTTAGCTTTGGGGGTGCTGTGGCGGTGTGCCCCCGCTCGCCAGAGAAGGTCCCTTGG
GTCCTTGACATGTATGAGGCACTTGCAGAGGTGATCCCTGAAATGAAGGACTTGTGCATA
GGACGATGTTCTAGGGATGGCGTGATCAGTGACGTGCAAGCCATTCTTGATAGGCTTGGG
GATGCCATGTGGGGATCAGGAACACTTGGAGAGAATGACCCCTTTTGGAAGGCGTCTTCT
GAAGCTGATATCTTACCTGGAGGCCAATTTGCAAGAGTGTACCATTATTTTGCTGCTTCT
GAGATATACAATGCAATCCGTGTGTTCATTGCTTGCTATGTCTGGATGACTGGATTTGGG
AATTTCTCCTATTACTATATCAAGAAAGATTTTAGTATTGCAAGATTTGCGCAGATGATG
TGGAGGTTAAATTTCTTTGTGGCATTCTGTTGCATTGTCCTTGACAATGATCTCATGCTC
TATTATATATGCCCAATGCACACACTATTTACTCTTATGGTATATGGATCACTTGGTCTA
TTTAACAAATGCAATGAGGTACCATCAATCATGGCTATTAAGATTGCTTGCTGCTTCTTG
TCTGTAATTTTGATATGGGAAATCCCTGGGGTATTTGAATTATTGTGGGGCCCCTTTACG
TTTCTGTTAGATATGGACCTATATTACCCTGATCACCCTCTGAGATTATCAACCCCGCCT
CTGTCTCAACCGTCTGATTGCCTCGCCTCGCTCCCGCTCCGGTCCTTCGTGTCGATCGCC
TCGGGCCGGCAGCTCCTCAACATCCCCAGCTACGTGGCCCGTTCGCGCCTCGGCACGCCG
GCGCAGGCGCTCCTCGTGGCCATCGACCCCAGCAACGATGCCGCGTGGGTGCCGTGCGCC
GCCAGCGCGGGCTGCGCCCGGGCGTCGTCGTTCGACCCAACGCGATCGTCCACGTACCGC
CCCGCCCTGCTCGGGCAGGACGCGCTGGCCCTCCACGACGACGTGGACGTCGTCGCGGCC
TACACGTTCGGGTGCCTCCGCGTCGTCACGGGCGGCTCCGTACCGCCGCAGGGGCTCGTG
GGATTCGGCTGCGGGCCGCTCTCGTTCCCGTCGCAGAATAAGGACGTGTATGGCTTCGTC
TTCTCCTACTGCCTGCCGAGCTACAAGTCCTCCAACTTCTCCAGCACGCTCCGGCTCGGC
CCCGCCGGCCAGCCGAAGAGGATCAAGATGACGCCGCTGCTGTCCAACCCGCACCGCCCT
TCCCTCTACTACGTCAACATGGTCGGGATCCACGTCGGCGGCAGGCCCATGTTGGTACCC
GCGTCGGCCCTCGCGTTCGACCCGGCCAGCGGCCGCGGCACCATCGTCGACGCCGGGACG
ATGTTCACGCGGCTGTCCGCGCCCGTGTACGCCGCCGTGCGTGACGTGTTCCGGAGCAGG
GTGCGAGCGCCGGTGACAGGCCCCCTTGGTGGCTTCGACACGTGCTACAACGTGACCATC
TCTGTGCCGACCGTCACCTTCTCGTTCGATGGGCGGGTGTCGGTGACGCTGCCGGAGGAG
AACGTGGTCATCCGAAGCTCCTCGGACGGCATCGCGTGCCTGGCCATGGCTGCGGGACCA
TCGGACGGCGTCGACGCTGTGCTCAACGTGCTGGCCAGCATGCAGCAGCAGAACCACCGC
GTGCTGTTCGACGTCGCCAATGGCCGCGTCGGTTTCTCGCGCGAGCTCTGCACGACCTAA

Peptide Sequence

PEP ID

Zm00001d016805_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:176720309:176723469:-1 gene:Zm00001d016805 transcript:Zm00001d016805_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence

MVRLEEELRHLMVRHAVPIDLTSLFFSLRRLSLESMDDLDTCPDFDAVTPHSLDATPAGP
ETARGASLGSNPFEDQVFDPILSFGGAVAVCPRSPEKVPWVLDMYEALAEVIPEMKDLCI
GRCSRDGVISDVQAILDRLGDAMWGSGTLGENDPFWKASSEADILPGGQFARVYHYFAAS
EIYNAIRVFIACYVWMTGFGNFSYYYIKKDFSIARFAQMMWRLNFFVAFCCIVLDNDLML
YYICPMHTLFTLMVYGSLGLFNKCNEVPSIMAIKIACCFLSVILIWEIPGVFELLWGPFT
FLLDMDLYYPDHPLRLSTPPLSQPSDCLASLPLRSFVSIASGRQLLNIPSYVARSRLGTP
AQALLVAIDPSNDAAWVPCAASAGCARASSFDPTRSSTYRPALLGQDALALHDDVDVVAA
YTFGCLRVVTGGSVPPQGLVGFGCGPLSFPSQNKDVYGFVFSYCLPSYKSSNFSSTLRLG
PAGQPKRIKMTPLLSNPHRPSLYYVNMVGIHVGGRPMLVPASALAFDPASGRGTIVDAGT
MFTRLSAPVYAAVRDVFRSRVRAPVTGPLGGFDTCYNVTISVPTVTFSFDGRVSVTLPEE
NVVIRSSSDGIACLAMAAGPSDGVDAVLNVLASMQQQNHRVLFDVANGRVGFSRELCTT

Transcript Sequence

Transcript ID

Zm00001d016805_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:176720309:176723469:-1 gene:Zm00001d016805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence

ATGGTGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTCCCCATCGAC
CTCACGAGCCTCTTCTTCTCGCTCCGCCGCCTCTCGCTCGAGTCCATGGACGACCTCGAC
ACCTGCCCCGACTTCGACGCCGTCACGCCGCATAGCCTCGACGCCACCCCCGCCGGCCCG
GAGACCGCGCGCGGCGCCTCCCTCGGATCTAATCCTTTTGAGGACCAGGTGTTTGATCCC
ATTCTTAGCTTTGGGGGTGCTGTGGCGGTGTGCCCCCGCTCGCCAGAGAAGGTCCCTTGG
GTCCTTGACATGTATGAGGCACTTGCAGAGGTGATCCCTGAAATGAAGGACTTGTGCATA
GGACGATGTTCTAGGGATGGCGTGATCAGTGACGTGCAAGCCATTCTTGATAGGCTTGGG
GATGCCATGTGGGGATCAGGAACACTTGGAGAGAATGACCCCTTTTGGAAGGCGTCTTCT
GAAGCTGATATCTTACCTGGAGGCCAATTTGCAAGAGTGTACCATTATTTTGCTGCTTCT
GAGATATACAATGCAATCCGTGTGTTCATTGCTTGCTATGTCTGGATGACTGGATTTGGG
AATTTCTCCTATTACTATATCAAGAAAGATTTTAGTATTGCAAGATTTGCGCAGATGATG
TGGAGGTTAAATTTCTTTGTGGCATTCTGTTGCATTGTCCTTGACAATGATCTCATGCTC
TATTATATATGCCCAATGCACACACTATTTACTCTTATGGTATATGGATCACTTGGTCTA
TTTAACAAATGCAATGAGGTACCATCAATCATGGCTATTAAGATTGCTTGCTGCTTCTTG
TCTGTAATTTTGATATGGGAAATCCCTGGGGTATTTGAATTATTGTGGGGCCCCTTTACG
TTTCTGTTAGATATGGACCTATATTACCCTGATCACCCTCTGAGATTATCAACCCCGCCT
CTGTCTCAACCGTCTGATTGCCTCGCCTCGCTCCCGCTCCGGTCCTTCGTGTCGATCGCC
TCGGGCCGGCAGCTCCTCAACATCCCCAGCTACGTGGCCCGTTCGCGCCTCGGCACGCCG
GCGCAGGCGCTCCTCGTGGCCATCGACCCCAGCAACGATGCCGCGTGGGTGCCGTGCGCC
GCCAGCGCGGGCTGCGCCCGGGCGTCGTCGTTCGACCCAACGCGATCGTCCACGTACCGC
CCCGCCCTGCTCGGGCAGGACGCGCTGGCCCTCCACGACGACGTGGACGTCGTCGCGGCC
TACACGTTCGGGTGCCTCCGCGTCGTCACGGGCGGCTCCGTACCGCCGCAGGGGCTCGTG
GGATTCGGCTGCGGGCCGCTCTCGTTCCCGTCGCAGAATAAGGACGTGTATGGCTTCGTC
TTCTCCTACTGCCTGCCGAGCTACAAGTCCTCCAACTTCTCCAGCACGCTCCGGCTCGGC
CCCGCCGGCCAGCCGAAGAGGATCAAGATGACGCCGCTGCTGTCCAACCCGCACCGCCCT
TCCCTCTACTACGTCAACATGGTCGGGATCCACGTCGGCGGCAGGCCCATGTTGGTACCC
GCGTCGGCCCTCGCGTTCGACCCGGCCAGCGGCCGCGGCACCATCGTCGACGCCGGGACG
ATGTTCACGCGGCTGTCCGCGCCCGTGTACGCCGCCGTGCGTGACGTGTTCCGGAGCAGG
GTGCGAGCGCCGGTGACAGGCCCCCTTGGTGGCTTCGACACGTGCTACAACGTGACCATC
TCTGTGCCGACCGTCACCTTCTCGTTCGATGGGCGGGTGTCGGTGACGCTGCCGGAGGAG
AACGTGGTCATCCGAAGCTCCTCGGACGGCATCGCGTGCCTGGCCATGGCTGCGGGACCA
TCGGACGGCGTCGACGCTGTGCTCAACGTGCTGGCCAGCATGCAGCAGCAGAACCACCGC
GTGCTGTTCGACGTCGCCAATGGCCGCGTCGGTTTCTCGCGCGAGCTCTGCACGACCTAA