Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016731_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:174487970:174493164:-1 gene:Zm00001d016731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence	ATGGAGGCGAGGGCGTCGCCGCGTCCGTCGGTCTCCATCGGTGGCGGCGGCGGCTTCGGA GCTGGGCGGGGTGACGACAGCGCCTTCTCGTTTCTCTCAAAGGGGTGGCGCGAGGTGCGG GATTCCGCCACCGCCGACCTGCGCCTCATGCGTGCGAGGGCTGATTCCCTCCGCACGCTC GCGGACCGCGAGCTCGAGCACATCCTCGCGTCCGCCTCCACTGCGCTGACCTCCGCGCCG CCGCCGCCGCTCGCCGCGGGGGCGCCCATAGCCGAGCTCGAGTTCGTGCGCACACGGATC CAGCCCAAGATCTCCGAACTGCGGCGCCGGTACGTGTCGCAGGAGCGGGAGCTCGGCCGC AGGGTGCTCGAGGGGTGGGCGCCGCGCGGGGCGGGGAAACCCGCGCGCGCACGTGTTGAC CTCTCTGGGATCACCGCCATCCGCAACGCCATCGTCTCTGAAGTGGATGGCGGGGAGCGC TGGAGGCGCGTGGTGTGGAACGGGGAGGCGGAAGAGGGGAAAGAATGGGAGGTGCTCAGG ATGATACGGGACGGCATCAAAGAGTTCGAGCGCCGGAGCCAGACCAAGGAGATTTTTGAG GGATTGCGCAGTACCGGCGAGCTCGTCGAGAAATTCAAGTCCAGCCTGAAATCATTCAAC ATGGAGTCTCAAGGATCCAAGGAAATCCAACCACTGGATCTACCTGAAATACTGGCAAAT CTTGTAAGGCAGTCTGAACCATTTTTGGATCAACTTGGTGTACGGAGAGATCAGTGTGAC AAACTAGTGGAGGCATTGTGTAGGAAACAAAATCATTCCCTTTCAGAAAACACATCCTTG CCTGTAAATGATAAGTCATCAGACGAACTTGACTTGAGAATCGCAAGCGTGCTTCAAAGT TCTGGTTATCATGCTGATGATGGTTTCTGGAGTGAACCTACAAAGTCTGAGGTCTCAGAC GATAAAAGACATGTGGCTATAGTCACCACAGCAAGTTTACCATGGATGACAGGAACAGCA GTTAATCCATTGTTCCGTGCAGCATATCTCGCAAAAGGTACTAGACAAGATGTGACACTG GTAGTGCCTTGGCTTTGCAAATCAGACCAAGAACTGGTATACCCAAATAGCATGACGTTC AGTTCACCAGAAGAGCAGGAAACTTATATAAGGAGCTGGCTGGAGGAAAGACTAGGATTT GAATCAAACTTCAAGATATCCTTTTATCCTGGCAAGTTCTCAAAAGAGCGGCGTAGCATC ATTCCAGCTGGTGATACGTCTCAGTTCATACCGTCAAGAGAAGCTGATATAGCAATATTG GAAGAACCAGAACATCTCAATTGGTATCATCATGGGAAACGCTGGACTGACAAGTTCAAC CATGTTGTTGGTGTAGTTCATACAAACTACCTGGAATATATCAAGAGAGAGAAGAATGGA GCTCTTCAGGCCTTTCTAGTTAAACACATCAACAATTGGGTGACCAGAGCATACTGTGAC AAGGTCTTACGTCTTTCTGCAGCAACTCAAGATTTACCAAAGTCTATTGTTTGCAATGTT CATGGTGTTAACCCAAAGTTCCTGAAGATTGGAGAAGAAATAACTGCCAATAGGGGGAGT GGGGAGCCTCCATTTTCCAAGGGAGCATATTTTCTTGGGAAGATGGTTTGGGCCAAAGGT TATAGGGAACTCATAGATTTGATGGCTAAACATAAAAGCGACTTAGAAGGATTCAAGTTA GATGTATACGGAAGTGGTGAGGACTCGCAAGAAGTTCAATCCACTGCCAGGAGGTTAGAT TTGAGTCTCAATTTTTTCAAGGGAAGGGATCATGCTGATAATTCACTCCATGGGTACAAG GTTTTCATAAATCCGAGCATTAGTGATGTCCTGTGCACAGCAACGGCAGAGGCTCTTGCA ATGGGGAAATTCGTGATCTGCGCAGAACATCCATCAAATGAGTTTTTCATGTCATTTCCG AACTGTTTGACATACAAGACTTCAGAGGAGTTTGTTGCGAGAGTGAAAGAGGCAATGGAT AGAGAACCCCAACCGCTAACCCCTGAGCAAAGATACAACCTTTCGTGGGAGGCAGCGACT GAGAGATTCATGGAGTACTCAGACCTTGACAAGGTTCTGAACAATGAGGCTGCTCAGCCT GGACAAGGTAGGAAAAGAAAGAATAAAAGAACCTCACAGCCTAATTTGTCCGACATAATG GATGGCGGTCTAGCGTTGGCCCATCGATGCTTAACTGGCAATGAGGTTCTCAGGCTGGCA ACCGGAGCCATTCCTGGTACCCGGGACTACGATAAGCAGCACTGTGTGGATATGGGTCTC TTGCCTCCTCAAGTACAGCACCCTGTATATGGCTGGTGA

Peptide Sequence

PEP ID	Zm00001d016731_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:174487970:174493164:-1 gene:Zm00001d016731 transcript:Zm00001d016731_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence	MEARASPRPSVSIGGGGGFGAGRGDDSAFSFLSKGWREVRDSATADLRLMRARADSLRTL ADRELEHILASASTALTSAPPPPLAAGAPIAELEFVRTRIQPKISELRRRYVSQERELGR RVLEGWAPRGAGKPARARVDLSGITAIRNAIVSEVDGGERWRRVVWNGEAEEGKEWEVLR MIRDGIKEFERRSQTKEIFEGLRSTGELVEKFKSSLKSFNMESQGSKEIQPLDLPEILAN LVRQSEPFLDQLGVRRDQCDKLVEALCRKQNHSLSENTSLPVNDKSSDELDLRIASVLQS SGYHADDGFWSEPTKSEVSDDKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKGTRQDVTL VVPWLCKSDQELVYPNSMTFSSPEEQETYIRSWLEERLGFESNFKISFYPGKFSKERRSI IPAGDTSQFIPSREADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNG ALQAFLVKHINNWVTRAYCDKVLRLSAATQDLPKSIVCNVHGVNPKFLKIGEEITANRGS GEPPFSKGAYFLGKMVWAKGYRELIDLMAKHKSDLEGFKLDVYGSGEDSQEVQSTARRLD LSLNFFKGRDHADNSLHGYKVFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFP NCLTYKTSEEFVARVKEAMDREPQPLTPEQRYNLSWEAATERFMEYSDLDKVLNNEAAQP GQGRKRKNKRTSQPNLSDIMDGGLALAHRCLTGNEVLRLATGAIPGTRDYDKQHCVDMGL LPPQVQHPVYGW

Transcript Sequence

Transcript ID	Zm00001d016731_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:174487970:174493164:-1 gene:Zm00001d016731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence	AATTCTCCAATCACTCTCACTGCCATGCCGACCCCACAGCAAGAGCCAGCCACGGATTGA CGGATGGGATACCTCCAAGTCGGAACGCGGCTTCCTTCCTCCGGCGGTCCGGCCCGAATC AACGCGTGGCGTCGGAGCTCCGTGGCGTCGTCGTCCTCTCCCCTCTCTTTCCCAACACCT CGCGTGTTGTCTAGCACTCTAGCTGCTTCTCTCGGTTCTCGCGACTCCCAAACGGCAAAA CGCCAAAACCCTAGCCGCGGCCATTCCGGAATTGGCCATGGAGGCGAGGGCGTCGCCGCG TCCGTCGGTCTCCATCGGTGGCGGCGGCGGCTTCGGAGCTGGGCGGGGTGACGACAGCGC CTTCTCGTTTCTCTCAAAGGGGTGGCGCGAGGTGCGGGATTCCGCCACCGCCGACCTGCG CCTCATGCGTGCGAGGGCTGATTCCCTCCGCACGCTCGCGGACCGCGAGCTCGAGCACAT CCTCGCGTCCGCCTCCACTGCGCTGACCTCCGCGCCGCCGCCGCCGCTCGCCGCGGGGGC GCCCATAGCCGAGCTCGAGTTCGTGCGCACACGGATCCAGCCCAAGATCTCCGAACTGCG GCGCCGGTACGTGTCGCAGGAGCGGGAGCTCGGCCGCAGGGTGCTCGAGGGGTGGGCGCC GCGCGGGGCGGGGAAACCCGCGCGCGCACGTGTTGACCTCTCTGGGATCACCGCCATCCG CAACGCCATCGTCTCTGAAGTGGATGGCGGGGAGCGCTGGAGGCGCGTGGTGTGGAACGG GGAGGCGGAAGAGGGGAAAGAATGGGAGGTGCTCAGGATGATACGGGACGGCATCAAAGA GTTCGAGCGCCGGAGCCAGACCAAGGAGATTTTTGAGGGATTGCGCAGTACCGGCGAGCT CGTCGAGAAATTCAAGTCCAGCCTGAAATCATTCAACATGGAGTCTCAAGGATCCAAGGA AATCCAACCACTGGATCTACCTGAAATACTGGCAAATCTTGTAAGGCAGTCTGAACCATT TTTGGATCAACTTGGTGTACGGAGAGATCAGTGTGACAAACTAGTGGAGGCATTGTGTAG GAAACAAAATCATTCCCTTTCAGAAAACACATCCTTGCCTGTAAATGATAAGTCATCAGA CGAACTTGACTTGAGAATCGCAAGCGTGCTTCAAAGTTCTGGTTATCATGCTGATGATGG TTTCTGGAGTGAACCTACAAAGTCTGAGGTCTCAGACGATAAAAGACATGTGGCTATAGT CACCACAGCAAGTTTACCATGGATGACAGGAACAGCAGTTAATCCATTGTTCCGTGCAGC ATATCTCGCAAAAGGTACTAGACAAGATGTGACACTGGTAGTGCCTTGGCTTTGCAAATC AGACCAAGAACTGGTATACCCAAATAGCATGACGTTCAGTTCACCAGAAGAGCAGGAAAC TTATATAAGGAGCTGGCTGGAGGAAAGACTAGGATTTGAATCAAACTTCAAGATATCCTT TTATCCTGGCAAGTTCTCAAAAGAGCGGCGTAGCATCATTCCAGCTGGTGATACGTCTCA GTTCATACCGTCAAGAGAAGCTGATATAGCAATATTGGAAGAACCAGAACATCTCAATTG GTATCATCATGGGAAACGCTGGACTGACAAGTTCAACCATGTTGTTGGTGTAGTTCATAC AAACTACCTGGAATATATCAAGAGAGAGAAGAATGGAGCTCTTCAGGCCTTTCTAGTTAA ACACATCAACAATTGGGTGACCAGAGCATACTGTGACAAGGTCTTACGTCTTTCTGCAGC AACTCAAGATTTACCAAAGTCTATTGTTTGCAATGTTCATGGTGTTAACCCAAAGTTCCT GAAGATTGGAGAAGAAATAACTGCCAATAGGGGGAGTGGGGAGCCTCCATTTTCCAAGGG AGCATATTTTCTTGGGAAGATGGTTTGGGCCAAAGGTTATAGGGAACTCATAGATTTGAT GGCTAAACATAAAAGCGACTTAGAAGGATTCAAGTTAGATGTATACGGAAGTGGTGAGGA CTCGCAAGAAGTTCAATCCACTGCCAGGAGGTTAGATTTGAGTCTCAATTTTTTCAAGGG AAGGGATCATGCTGATAATTCACTCCATGGGTACAAGGTTTTCATAAATCCGAGCATTAG TGATGTCCTGTGCACAGCAACGGCAGAGGCTCTTGCAATGGGGAAATTCGTGATCTGCGC AGAACATCCATCAAATGAGTTTTTCATGTCATTTCCGAACTGTTTGACATACAAGACTTC AGAGGAGTTTGTTGCGAGAGTGAAAGAGGCAATGGATAGAGAACCCCAACCGCTAACCCC TGAGCAAAGATACAACCTTTCGTGGGAGGCAGCGACTGAGAGATTCATGGAGTACTCAGA CCTTGACAAGGTTCTGAACAATGAGGCTGCTCAGCCTGGACAAGGTAGGAAAAGAAAGAA TAAAAGAACCTCACAGCCTAATTTGTCCGACATAATGGATGGCGGTCTAGCGTTGGCCCA TCGATGCTTAACTGGCAATGAGGTTCTCAGGCTGGCAACCGGAGCCATTCCTGGTACCCG GGACTACGATAAGCAGCACTGTGTGGATATGGGTCTCTTGCCTCCTCAAGTACAGCACCC TGTATATGGCTGGTGATATGGCCGGTGATGACTGATGAGCACCCAAAGCTAATCGTAGGT ATATATGTACATAATACACCATGTCGCCCTTATGTCGACCAATGTTTGGAGTATTGTAAT TGTAGCATGCATGACGACCTTTGCCCATTGTTTTGTACTCTGTAATAAGGTTCTCTCCTT AAATTGGAGTTTTATCGCAGAAATGTGTAGTACATGGACATCAAAAGTTCATGACTCCAG AAGACTGTCAGCACAATATTTGTCTGCTTTTGCCATTGAATTAGAGAAACATAGTC