Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016696_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:172834215:172837959:1 gene:Zm00001d016696 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

ATGGCTGCTGACTCGGGCAAGATGCCGTCCGCCGGCGGCAAGGCGCCGCCGCCCAAGTCA
TCCGAATCCGGCATCATGAAGAGGCTCCCGCGCCTGGCGCTCGTCTTCCTGGTGGCGCTG
CTGTACCGGCAGCTGCAGGCCCCGGCTCCCAGGGTCCCCGGAACGCCCGGCGGCCCCCCG
GTGACGTCGCCGAGGATCAGGCTCAAGGACGGCAGGCACCTCGCGTACCACGAGTCGGGC
GTCCCCAGGGAGCAGGCCAGGTACAGGATCGTCTTCATGCACGGGTTCGACTCGTGCAGG
TACGACGTGCTCCGGGTGTCGCCCGAGCTGGCCCGGGAGCTGGGCGTCTACCTGCTCTCC
TTCGACCGGCCCGGGTACGGGGAGAGCGACCCGCACCCGGCTAGGACCGACAAGAGCGTC
GCCCTGGACATCGAGCAGCTCGCCGACGCCATGGAGCTCGGCGACAGGTTCTACCTCGCC
GGCTTCTCCATGGGCGGGGAGATCATGTGGAGCTGCCTCAAGTACATCCCGCACAGGCTT
TCCGGCGTAGCCATCCTGGGCCCCGTGGGCAACTTCTGGTGGTCCGGGCTCCCCGCGAAC
GTGTCCCTGGAGGCCTGGAACGTGCAGGTGGCGCAGGACAAGTGGGCCGTGGGCGTGGCG
CACCACGCTCCCTGGCTCACCTACTGGTGGAACACCCAGAAGCTGTTCCCGGCCTCCAGC
GTCATCGCCTTCAACCCGGCCATCATGTCCCCGGCGGACATGGAACTCATCCCCAGCTTC
GCCTACAGGACCCACGCCTACCAGGCGCGGCAGCAGGGGGAGCACGAGAGCCTGCACCGC
GACATGATGGTCGGCTTCGGCAAGTGGAGCTGGAGCCCGCTGGAGCTGGAGGACCCGTTC
CCCGACGGCGACGGCAAGGTGCACCTGTGGCACGGCGCCGAGGACCTCATCGTGCCCGTG
GGGCTGTCTAGGCACATCAGCAAGAGCCTGCCGTGGGTGCGCTACCACGAGCTGCCCACG
GCCGGCCACCTCTTCCCCATGGCCGACGGGATGGCCGACGTCATCGTCAAGTCACTGCTG
CTGGGCGACGAGTGA

Peptide Sequence

PEP ID

Zm00001d016696_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:172834215:172837959:1 gene:Zm00001d016696 transcript:Zm00001d016696_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

MAADSGKMPSAGGKAPPPKSSESGIMKRLPRLALVFLVALLYRQLQAPAPRVPGTPGGPP
VTSPRIRLKDGRHLAYHESGVPREQARYRIVFMHGFDSCRYDVLRVSPELARELGVYLLS
FDRPGYGESDPHPARTDKSVALDIEQLADAMELGDRFYLAGFSMGGEIMWSCLKYIPHRL
SGVAILGPVGNFWWSGLPANVSLEAWNVQVAQDKWAVGVAHHAPWLTYWWNTQKLFPASS
VIAFNPAIMSPADMELIPSFAYRTHAYQARQQGEHESLHRDMMVGFGKWSWSPLELEDPF
PDGDGKVHLWHGAEDLIVPVGLSRHISKSLPWVRYHELPTAGHLFPMADGMADVIVKSLL
LGDE

Transcript Sequence

Transcript ID

Zm00001d016696_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:172834215:172837959:1 gene:Zm00001d016696 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

GGTAAAACCAGGCACGCACGACACAAAAAGCCGAGCTCGAGAGTGACATCGTCTCGCAGG
CAGTCGCGGTTGGGGTGGCTTCTCTAGTCGCTATAAAATGGCCTCTGGTTGCGTCGCCTC
CCTCTCCACCCGTCCGATCTAACCGTCCCACCGCCCAAGCCACTCGAGGGCCGATCTTGC
TGCTGCCCTGGCCCCTGGCCCCTGGGCCCTGGCCCTTCGCCCTCCGCCCTCCTCCTCGGC
ACCGTCTCGTCCGACCATGGCTGCTGACTCGGGCAAGATGCCGTCCGCCGGCGGCAAGGC
GCCGCCGCCCAAGTCATCCGAATCCGGCATCATGAAGAGGCTCCCGCGCCTGGCGCTCGT
CTTCCTGGTGGCGCTGCTGTACCGGCAGCTGCAGGCCCCGGCTCCCAGGGTCCCCGGAAC
GCCCGGCGGCCCCCCGGTGACGTCGCCGAGGATCAGGCTCAAGGACGGCAGGCACCTCGC
GTACCACGAGTCGGGCGTCCCCAGGGAGCAGGCCAGGTACAGGATCGTCTTCATGCACGG
GTTCGACTCGTGCAGGTACGACGTGCTCCGGGTGTCGCCCGAGCTGGCCCGGGAGCTGGG
CGTCTACCTGCTCTCCTTCGACCGGCCCGGGTACGGGGAGAGCGACCCGCACCCGGCTAG
GACCGACAAGAGCGTCGCCCTGGACATCGAGCAGCTCGCCGACGCCATGGAGCTCGGCGA
CAGGTTCTACCTCGCCGGCTTCTCCATGGGCGGGGAGATCATGTGGAGCTGCCTCAAGTA
CATCCCGCACAGGCTTTCCGGCGTAGCCATCCTGGGCCCCGTGGGCAACTTCTGGTGGTC
CGGGCTCCCCGCGAACGTGTCCCTGGAGGCCTGGAACGTGCAGGTGGCGCAGGACAAGTG
GGCCGTGGGCGTGGCGCACCACGCTCCCTGGCTCACCTACTGGTGGAACACCCAGAAGCT
GTTCCCGGCCTCCAGCGTCATCGCCTTCAACCCGGCCATCATGTCCCCGGCGGACATGGA
ACTCATCCCCAGCTTCGCCTACAGGACCCACGCCTACCAGGCGCGGCAGCAGGGGGAGCA
CGAGAGCCTGCACCGCGACATGATGGTCGGCTTCGGCAAGTGGAGCTGGAGCCCGCTGGA
GCTGGAGGACCCGTTCCCCGACGGCGACGGCAAGGTGCACCTGTGGCACGGCGCCGAGGA
CCTCATCGTGCCCGTGGGGCTGTCTAGGCACATCAGCAAGAGCCTGCCGTGGGTGCGCTA
CCACGAGCTGCCCACGGCCGGCCACCTCTTCCCCATGGCCGACGGGATGGCCGACGTCAT
CGTCAAGTCACTGCTGCTGGGCGACGAGTGACGATTGTCATCTCCCGTCGTCGTCGTCGA
GTCGATCTCCCTCTCCCTCTTCCTCCCCCCCTGCTTTTTCCTGTGCGCGCGAGTCTTTTT
GACTCTTTGTAGTGCAGTGAGAGAATGCTACGGACATGTCTTTGCGATCGTTACTCCTAT
TCCTATATAATATATGATATATAGATAAAGAAATATTAACGGGATGTTTAGTT