Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016674_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:172180319:172183764:-1 gene:Zm00001d016674 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 6 description:Heat shock factor protein 2
Sequence	ATGCACCGCGCCCGCCCCACCGCGCACGCTAATGACCCCGATGCTCCGTACGCCGCCGCC GTCGCGATGCTGCTGGAGCCCAAACTCGAGGACGAGGAGTTGCCGCTGCAGCAGCTGGCG TCCCCGGGCCCCTTCGTGTCCCTGGACCAGCTGATGCCGGCGGTGGCCGTGCCGGCCGAA CCGCGCCCGCTGGAGGCGCTGCTGCAAGGCCCGCAGCTGCCGCCCTTCCTGTCCAAGACG TACGACCTGGTGAACGAGCCGGCGCTGGACGGGGTCATCTCCTGGGGCGCTGCCGGGAAC AGCTTCGTCGTGTGGGACCCCTCCACCTTCGCGCGCGACGTGCTGCCGCACAACTTCAAG CACAACAATTTCTCCAGCTTCGTCAGGCAGCTCAACACCTATGGTTTCCGCAAGGTTCAT GCTGACAGATGGGAGTTTGCTCACGAAGATTTCCTGCGAGATAGCAAGCATCTATTGAAG AGGATTGTCAGGCGCAGGTCCTCCCCAACAAAACAAAGCAGCGTTCAGCCTGGCTCTTCT TCTGGAGAGTCCAGCTTGGACCCTGAGCTCCACACGCTGAGGAGAGAGAAGAACGCGCTG CTTGAAGAAGTAGCAAGGTTGAAACAGGAACACCGCCAGACAATTGAGCAAATGAGCACG CTGAATCACAGGCTGGAATCTGCAGAGGACCGGCAGAGGCAGATGGTCTCTTTCCTGGCC AAGCTCCTTCAGAACCCGAGTTTCGTGAGGAAGCTGAAGCTGCACAGGGAGAAGAAGGAG ATCGACTCCACCAGGGTGAAAAGAAAGTTTCTCAAACATGTTCCTCATGGCAGCGTAGAG TCAGGTGAATCCAGCTCACAGCACGCCGGAGAGAATGGTTCGTATTTCGCTGTGAGTTCC CCCATGGCTACAACTACAAGCGTGCATGACGACATCACGGAGCTTCAGAACTTTCTTTTG GAAGATGATGACCTCAACTTCGGCATGGATTCAGAAAACACCGGGCTTGAAGGCACCGAG GCAACAGATGATATTGGAGAACTGATTCAGGGGTTCGACACACAAGAGGAACTTGACCTC GGCAGTGGAGCTGAGCTACAGGAGATGCCTCCAGCTTCTGGCCCTCTTGCTCGAGATCCC ACAATCGGCAGGTTCAAGGGAAAGAATGTGCTGTGTCCAGGACTGGACGCTACCTCCTCC GAAGGCGACTGCCTCAGTCCATTGCCTGACAACATGGGGCTGCTTTCAGGCACCATGCTA GGGACGGCAGGCAGCATGATGGCCGCTGACGATGAGCAAATATGGGGCGTTGATGCTTCG GCAGCCCTGCAAAGCTCTTGCAGTGGCACTAGCCAACAAGCTTTCGGTAGCCATGCTAGT GATCCCTATCTGATGGACATCGCCAACAGGCCTGAGAGATTCTGGGAGCTTGATTTCCAG GCACTGGATGAGGCTGATCTGCAGCTGGACAAGTGTGCTATCGATGACCCTGCTCTTCAG CAGCAGCCAAGCATGAAGAAGCTGTAG

Peptide Sequence

PEP ID	Zm00001d016674_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:172180319:172183764:-1 gene:Zm00001d016674 transcript:Zm00001d016674_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 6 description:Heat shock factor protein 2
Sequence	MHRARPTAHANDPDAPYAAAVAMLLEPKLEDEELPLQQLASPGPFVSLDQLMPAVAVPAE PRPLEALLQGPQLPPFLSKTYDLVNEPALDGVISWGAAGNSFVVWDPSTFARDVLPHNFK HNNFSSFVRQLNTYGFRKVHADRWEFAHEDFLRDSKHLLKRIVRRRSSPTKQSSVQPGSS SGESSLDPELHTLRREKNALLEEVARLKQEHRQTIEQMSTLNHRLESAEDRQRQMVSFLA KLLQNPSFVRKLKLHREKKEIDSTRVKRKFLKHVPHGSVESGESSSQHAGENGSYFAVSS PMATTTSVHDDITELQNFLLEDDDLNFGMDSENTGLEGTEATDDIGELIQGFDTQEELDL GSGAELQEMPPASGPLARDPTIGRFKGKNVLCPGLDATSSEGDCLSPLPDNMGLLSGTML GTAGSMMAADDEQIWGVDASAALQSSCSGTSQQAFGSHASDPYLMDIANRPERFWELDFQ ALDEADLQLDKCAIDDPALQQQPSMKKL

Transcript Sequence

Transcript ID	Zm00001d016674_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:172180319:172183764:-1 gene:Zm00001d016674 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 6 description:Heat shock factor protein 2
Sequence	CCTCCGCCTCCCGGCGCCCGCATCGCCTCTCGCCTGCGCTGCGCTTTCCTTCCCCCAAGA TATTTTCCGGCCGCTCTACCCTGTAGCTGTAGCGCGTGCGCGCACCGCCTTGCCCTGCGG TCCGCAGCCACGAGACTGCCCTGCCCCGCCGCCAAGTGGCCAGAATCCCGCCGCGGGGCC CGCCGCGATCGCCCACCAAAACCACCCTCGGGCTCGGGTATACTACACAGATACATGGCC GGCCATCTCTGAGCCGGTCTCCCGGCAGCAGCAGTCCCTCGGGTTGTCCACGCGGAGCGC CAGCCGATGGCCGGCCACAGTATGTCGGTTCACCCGAAGCCTATAAATTCCTCGCCGCCC CGCCTCTCGCCGCCCCGCCTCTCGCCGCCCATTTCCCTCCGCCGCCTCCTAATCCTCAAC ACCCGCGCCCCCAACCGCGCCCGTCGTATGCCACCATGCACCGCGCCCGCCCCACCGCGC ACGCTAATGACCCCGATGCTCCGTACGCCGCCGCCGTCGCGATGCTGCTGGAGCCCAAAC TCGAGGACGAGGAGTTGCCGCTGCAGCAGCTGGCGTCCCCGGGCCCCTTCGTGTCCCTGG ACCAGCTGATGCCGGCGGTGGCCGTGCCGGCCGAACCGCGCCCGCTGGAGGCGCTGCTGC AAGGCCCGCAGCTGCCGCCCTTCCTGTCCAAGACGTACGACCTGGTGAACGAGCCGGCGC TGGACGGGGTCATCTCCTGGGGCGCTGCCGGGAACAGCTTCGTCGTGTGGGACCCCTCCA CCTTCGCGCGCGACGTGCTGCCGCACAACTTCAAGCACAACAATTTCTCCAGCTTCGTCA GGCAGCTCAACACCTATGGTTTCCGCAAGGTTCATGCTGACAGATGGGAGTTTGCTCACG AAGATTTCCTGCGAGATAGCAAGCATCTATTGAAGAGGATTGTCAGGCGCAGGTCCTCCC CAACAAAACAAAGCAGCGTTCAGCCTGGCTCTTCTTCTGGAGAGTCCAGCTTGGACCCTG AGCTCCACACGCTGAGGAGAGAGAAGAACGCGCTGCTTGAAGAAGTAGCAAGGTTGAAAC AGGAACACCGCCAGACAATTGAGCAAATGAGCACGCTGAATCACAGGCTGGAATCTGCAG AGGACCGGCAGAGGCAGATGGTCTCTTTCCTGGCCAAGCTCCTTCAGAACCCGAGTTTCG TGAGGAAGCTGAAGCTGCACAGGGAGAAGAAGGAGATCGACTCCACCAGGGTGAAAAGAA AGTTTCTCAAACATGTTCCTCATGGCAGCGTAGAGTCAGGTGAATCCAGCTCACAGCACG CCGGAGAGAATGGTTCGTATTTCGCTGTGAGTTCCCCCATGGCTACAACTACAAGCGTGC ATGACGACATCACGGAGCTTCAGAACTTTCTTTTGGAAGATGATGACCTCAACTTCGGCA TGGATTCAGAAAACACCGGGCTTGAAGGCACCGAGGCAACAGATGATATTGGAGAACTGA TTCAGGGGTTCGACACACAAGAGGAACTTGACCTCGGCAGTGGAGCTGAGCTACAGGAGA TGCCTCCAGCTTCTGGCCCTCTTGCTCGAGATCCCACAATCGGCAGGTTCAAGGGAAAGA ATGTGCTGTGTCCAGGACTGGACGCTACCTCCTCCGAAGGCGACTGCCTCAGTCCATTGC CTGACAACATGGGGCTGCTTTCAGGCACCATGCTAGGGACGGCAGGCAGCATGATGGCCG CTGACGATGAGCAAATATGGGGCGTTGATGCTTCGGCAGCCCTGCAAAGCTCTTGCAGTG GCACTAGCCAACAAGCTTTCGGTAGCCATGCTAGTGATCCCTATCTGATGGACATCGCCA ACAGGCCTGAGAGATTCTGGGAGCTTGATTTCCAGGCACTGGATGAGGCTGATCTGCAGC TGGACAAGTGTGCTATCGATGACCCTGCTCTTCAGCAGCAGCCAAGCATGAAGAAGCTGT AGACGAATTTCCGTTGTCAGACAGACAGTATGGTGGTGCTTCATCCACTGAAGTGCTACA ATTAACTTATGGAGATTGCTATAGTTACTTCGGTATTTTGGAGCGAGGCTGATGAACTCG CCTACTATGGCACTTAGTAGTAGCAGCAGCAGTAGTATGTTTTTGTTTCCCATTTATTCA CCCCCGGTGTTTTTGAATGGAAACTTGTATCCTAGTGATTTCTTCAGAGCAGCTGTTAAC TGCTCTGGCCGATTCTTTTTTTTTTTGTTTCCATTTATGTTTTTGTTCTGATTCTTTTAC TTGCTAGTTGCTACTTGCGAATGTCTTGCAATGAGTAATGGGATTTAAAAAAAAATCCGT TCTCAGAGAACCAAGCGATGTACTGATGTGCTGCTGAATGCCAAGAAGTGGCTGAATTCT GTT