Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016615_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:170212434:170216657:1 gene:Zm00001d016615 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein BONZAI 2
Sequence

ATGGAGATGATATTCCGCTGTTCGGATCTTGAAATCAAGGATCTTCTAACAAAGAGTGAT
ACTTTTTTGCTAATATCTGGAATATCAGATAGTGGAATGCCTGTTCCAATTTGCAAGACA
GAAGTAAGAAAGAATGATCTCAATCCTAGGTGGAGGCCAGAGAACCCTCTAATTGTAGAG
TGCTTTAACTTCAGTAGCAATGGCAAACATGACCTAGTCGGCAAGATAGTCAAGTCAGTT
GCAGAATTGGAAAATATGTACCATAGGAAGAATGGTGAAAATTTCTTTGTTCCTGCCAGC
AATGCACATGAATGTCACAGTAAGGAGGTGTTGAAGAGCCAGCTATATGTAGAGAAATAT
GTTGAGAGTAACAGACATACTTTCCTAGATTATATTTCTGTTGGGTGCCAGTTGAATTTT
ATGGTAGGCGTAGATTTCACAGCTTCAAATGGAAATCCACGGCTTCCAGATTCTTTGCAT
TATATTGACCCCTCAGGTCGGCCAAATGTATATCAGAAGGCAATACTGGAAATTGGTGAT
GTTCTACAATATTATGACCCACCGAAGCGTTTCCCCGCTTGGGGCTTTGGAGCAAGACCT
ATTGACGGTCCTGTTTCTCATTGTTTTAATTTGAATGGCAGCACTTATCAACCTGAGGTT
GACGGAATACAAGGAATTATGTCAGCTTATATCAGCGCTCTTCGTAATGTATCATTAGCT
GGTCCTACCCTCTTTGGTCAGTTGATAAGCACCGCCATGGCGATAGCTAGCCAATCTCTT
GCTGAGAATCAACATAAATACTTCATTTTGTTAATAGTCACTGATGGCGTGGTAACTGAT
TTTCAAGAGACTATTGATGCGATCATAAAGGCATCAGATTTTCCTATATCCATAATTGTT
GTTGGAGTTGGAGGGGCTGATTTCAAGGAAATGGAGTTTCTAGATCCAAACAAAGGAGAG
AAACTGGAAAGCTCAACCGGGAGAGTTGCATCAAGGGATATGATACAGTTTGCCCCGATG
AAGGATATGCACGTTTCCTCGCTGAAAAATGATGGAACTTAG

Peptide Sequence

PEP ID

Zm00001d016615_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:170212434:170216657:1 gene:Zm00001d016615 transcript:Zm00001d016615_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein BONZAI 2
Sequence

MEMIFRCSDLEIKDLLTKSDTFLLISGISDSGMPVPICKTEVRKNDLNPRWRPENPLIVE
CFNFSSNGKHDLVGKIVKSVAELENMYHRKNGENFFVPASNAHECHSKEVLKSQLYVEKY
VESNRHTFLDYISVGCQLNFMVGVDFTASNGNPRLPDSLHYIDPSGRPNVYQKAILEIGD
VLQYYDPPKRFPAWGFGARPIDGPVSHCFNLNGSTYQPEVDGIQGIMSAYISALRNVSLA
GPTLFGQLISTAMAIASQSLAENQHKYFILLIVTDGVVTDFQETIDAIIKASDFPISIIV
VGVGGADFKEMEFLDPNKGEKLESSTGRVASRDMIQFAPMKDMHVSSLKNDGT

Transcript Sequence

Transcript ID

Zm00001d016615_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:170212434:170216657:1 gene:Zm00001d016615 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein BONZAI 2
Sequence

ACCAATCCCGTGCAACATCAGTGCACGGAGCACGTGGACATCGACCCGCACTTCGTCCGC
GAGCGTGTCGTTGCTGGTGACGTTCGGGTTCTCAGTATCCGGACCACGTTGCAGTTCGCC
GACATCTTCACCAAGGGGCTGCCGTCAAGTGTTTTCGCCGACTTTCGATCCAGTCTCAAC
ATCTGTACAAGATAGAGTTGAGGCTAGGGGGGGAGTGTTAGACCTTGTTAGGGTTTTGGG
GCTAGCCCCCTTGTATTTATCTGCATACCCCTATGTAATGGGCTAGGCCCAACTACTCTT
GGTATATTAATACAACTTCCAACCCCAGTTAGGGTTTCACTCATTCCAACTCAGACAAGA
GTTGTGCTGCTATTGGATGGTCACACAAGACACTGGACATGAAATATGTTGCTCTTGGCA
GCAGCTTTTTTGTTGCACTACATGCTTGGTAGATGTGTTTCTCAGCTTCTGATTCACAAC
CATCTAGAGGCTATTATACCGTGAAGGCCGTGTAGTTAGCTTCAGACTTTGGTACAGGGA
GGGAACACAGCTAGACAGTATATATAATTTTAAGGGGCTTCATTGAAAATTCAAAGACCG
TCTCTGCAAACCACCATGTTTGTGCCAATGTGTTGTCGCACCAACTGCCTAATGACTATA
GACCATTAGTTGATTCAATTTGTTTAGTGACCTAGATGTGCAAGTTTGGAGTGCATGTAC
CCAATTGAACCTATATGATACGTCACAAGTCTCATGACCCTTAATGCAATTTACTTGCAT
TTACAACTTTAACACAATTGGTAGCTTGTTCTCTAGTGGCCTAAGGTAACACATACATGA
CTTAGATATGAGCATCATATTTTACAACTGCAAAGCAGCACTTGCATGTTGCATCACCTG
AAGGTTGTTGTGGTTCCACAATTTCTTATGTTAAATTGTTTCAAGACCATCCTAATTTTG
GATTAATACCATTTTTTACTTCATTGAAGACAGACTTTTTTTGCAGGTTATCACCAAACG
GGACAGACTGCTGACTCTGAAGCTTGGTGTTTCTGAACATAACTTGCCAAATCCTAATAA
TTTTGGTGAGCTAACTGTTCAGGCTGAAGAAAGTTCAGGTTCAAAAGCAATAATGGAGAT
GATATTCCGCTGTTCGGATCTTGAAATCAAGGATCTTCTAACAAAGAGTGATACTTTTTT
GCTAATATCTGGAATATCAGATAGTGGAATGCCTGTTCCAATTTGCAAGACAGAAGTAAG
AAAGAATGATCTCAATCCTAGGTGGAGGCCAGAGAACCCTCTAATTGTAGAGTGCTTTAA
CTTCAGTAGCAATGGCAAACATGACCTAGTCGGCAAGATAGTCAAGTCAGTTGCAGAATT
GGAAAATATGTACCATAGGAAGAATGGTGAAAATTTCTTTGTTCCTGCCAGCAATGCACA
TGAATGTCACAGTAAGGAGGTGTTGAAGAGCCAGCTATATGTAGAGAAATATGTTGAGAG
TAACAGACATACTTTCCTAGATTATATTTCTGTTGGGTGCCAGTTGAATTTTATGGTAGG
CGTAGATTTCACAGCTTCAAATGGAAATCCACGGCTTCCAGATTCTTTGCATTATATTGA
CCCCTCAGGTCGGCCAAATGTATATCAGAAGGCAATACTGGAAATTGGTGATGTTCTACA
ATATTATGACCCACCGAAGCGTTTCCCCGCTTGGGGCTTTGGAGCAAGACCTATTGACGG
TCCTGTTTCTCATTGTTTTAATTTGAATGGCAGCACTTATCAACCTGAGGTTGACGGAAT
ACAAGGAATTATGTCAGCTTATATCAGCGCTCTTCGTAATGTATCATTAGCTGGTCCTAC
CCTCTTTGGTCAGTTGATAAGCACCGCCATGGCGATAGCTAGCCAATCTCTTGCTGAGAA
TCAACATAAATACTTCATTTTGTTAATAGTCACTGATGGCGTGGTAACTGATTTTCAAGA
GACTATTGATGCGATCATAAAGGCATCAGATTTTCCTATATCCATAATTGTTGTTGGAGT
TGGAGGGGCTGATTTCAAGGAAATGGAGTTTCTAGATCCAAACAAAGGAGAGAAACTGGA
AAGCTCAACCGGGAGAGTTGCATCAAGGGATATGATACAGTTTGCCCCGATGAAGGATAT
GCACGTTTCCTCGCTGAAAAATGATGGAACTTAG