Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016606_T039
CDS Infomation

cds chromosome:B73_RefGen_v4:5:169943684:169949554:1 gene:Zm00001d016606 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MEI2-like 1
Sequence

ATGGATGTGCGTCTACGCCAGCCAGTTCAAAAGGTTGATCTAACTCATGTAGATGATGAG
CCCTTTGAGTTAACAGAGGAAATCGAGGCGCAAATAATAGGAAACATACTTCCTGATGAT
GATGACCTACTATCAGATGTTCTTGATGTTGGGTACACAGCCCATGCTAACATGGGTGAT
GATGTCGATGATGATATATTCTACACTGGAGGCGGGATGGAACTGGAAACCGATGAAAAT
AAAAAAAATACAGAACTTAATGGAGCTAATGATGGTCTTGGGTTGCTAAATGGCACAATG
AATGGTGAACATCCATATGGGGAACACCCTTCAAGAACTCTTTTTGTCCGAAACATTAAT
AGCAGCGTTGAGGATTCTGAATTAAAACTCCTATTTGAAAATTATGGAGAAATCAGCAAC
CTTTACACTGCCTGCAAACATCGTGGTTTTGTGATGATATCTTACTATGACATAAGATCA
GCATGGAATGCCATGAGGGCACTTCAAAACAAGCCACTCAGACGTAGAAAACTTGACATA
CATTACTCCATTCCGAAGGACAATCCTTCGGAGAAGGATATTAACCAGGGGATGCTTGTT
GTATTTAATGTTGACCCCTCTATAACAAACAATGATATCCATCAGATATTTAGCGAATAT
GGTGACATAAAAGAGCAGATTCGCGATGCACCGCAAAAGGGCCATCACAAAATTATAGAA
TTTTATGATGTCAGAGCAGCCGAAGGTGCAGCTCGTGCTTTAAACAGGAGTGATCTTGCT
GGCAAGAAAATAAAACTGGAGACTGGCCGTCTGAGTGGTGCTAGACGTTCAACACAGCAC
ATGTCCAAGGAGTTGGGGCAGGAAGAATTTGGTGTATGCAAACTGGGCAGTCCAAGCACA
AATAGCCCTTCATTGCCTTCATTGGGTTCATCTAATATAGCAGCAATGACATCTTGTGGA
CGTGAAAATGGGAGTATGCATGGTTTGCATTCTGGACTTCTCACATCAATGAGCCCGTTC
AGAGAGGCTTCATTTCTGGGTCTATCATCTACCCTACCACAGAGCCTGTCCTCTCCCATT
GGAATTGCTTCTGCTGCAACTCATAGTAACCAGGCTCCCCTTGGTGAGCTCAGCCACTCT
CTTAGTCGGATGAATGGGCATGTGAATTATGGTTTTCAAGGCTTGGGTGCTATTCATCCC
CATTCTCTTCCTGATGTTCACAATGGAGCAAATAATGGCACCCCTTACAATCTGAACACC
ATCACACCTGTTGGTGTCAATAAGAACTCAAGAACAGCTGAAGCAGTTGACAGCAGACAT
CTTCATAAAGTGGGTTCTGGCAATCTCAATGGGCACTCATTTGATCGTGCCGGTGAAGGA
GCCATGGGATTTTCAAGAAGTGGAAGCGGTCATAACTGTGGTCACCAGTTAATGTGGAAT
AATTCAAATAACTTCCACGGTCATCCCAATTCTCCTGTGCTGTGGCAAAATCCCGGATCA
TTTGTAAATAATGTACCGTCTCGCCCCCCAGCACAAATGCATGGAGTTCCAAGAGCACCA
TCACACATGATTGAGAATGTTCTTCCAATGCATCATCATCATGTGGGCTCTGCGCCAGCA
ATCAATCCGTCACTTTGGGACAGGCGGCATGGCTATGCAGGGGACTTGACAGAAGCATCA
AGTTTTCATCCTGGCAGTGTTGGGAGCATGGGATTTCCTGGTAGCCCTCAGCTTCATGGT
CTGGAGCTAAATAGCATATTTTCTCACACTGGTGGGAGTCGCATGGATCCAACTGTGTCT
TCAGCTCAGATCAGCGCACCATCTCAACAGAGAGGTCCTATGTTCCATGGAAGGAATCCT
ATGGTCCCCCTTCCTTCATTTGATTCACCTGGTGAGCGGATGAGAAGCCGGAGAAATGAT
TCAGGTGTTAACCAGTCTGATAATAAGCGGCAGTATGAGCTTGATGTTGACCGCATAATG
CGGGGGGAAGACTCACGAACTACACTGATGATAAAGAATATCCCAAATAAGTATACCTCC
AAGATGCTCTTGGCTGCTATTGATGAAAGTCATAAGGGCACTTATGATTTTATTTACTTG
CCAATTGATTTTAAGAATAAATGTAATGTCGGCTATGCTTTCATCAACATGACCAATCCT
CAGCATATCATTCCGTTTTATCAGAGTTTTAATGGTAAAAAGTGGGAGAAGTTTAACAGT
GAGAAGGTGGCATCACTTGCTTATGCCAGAATCCAAGGGAAAACAGCCCTGATTGCTCAT
TTCCAGAACTCTAGTTTGATGAATGAGGACAAACGCTGCCGCCCCATACTTTTCCACTCA
GATGGTCCTAATGCAGGAGATCAGGAACCTTTCCCCATGGGTTCAAACATCCGAGCCAGG
TCTGGGAGATCCCGGACTTCTTCGGGTGAAGAAAATCACCATGACATCCAGACAGTCTTG
ACCAACGGTGACACTTCTTCCAATGGAGCTGACAATTCAGGTCCCACCAAGGATACTGAG
TAG

Peptide Sequence

PEP ID

Zm00001d016606_P039
PEP Infomation

pep chromosome:B73_RefGen_v4:5:169943684:169949554:1 gene:Zm00001d016606 transcript:Zm00001d016606_T039 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MEI2-like 1
Sequence

MDVRLRQPVQKVDLTHVDDEPFELTEEIEAQIIGNILPDDDDLLSDVLDVGYTAHANMGD
DVDDDIFYTGGGMELETDENKKNTELNGANDGLGLLNGTMNGEHPYGEHPSRTLFVRNIN
SSVEDSELKLLFENYGEISNLYTACKHRGFVMISYYDIRSAWNAMRALQNKPLRRRKLDI
HYSIPKDNPSEKDINQGMLVVFNVDPSITNNDIHQIFSEYGDIKEQIRDAPQKGHHKIIE
FYDVRAAEGAARALNRSDLAGKKIKLETGRLSGARRSTQHMSKELGQEEFGVCKLGSPST
NSPSLPSLGSSNIAAMTSCGRENGSMHGLHSGLLTSMSPFREASFLGLSSTLPQSLSSPI
GIASAATHSNQAPLGELSHSLSRMNGHVNYGFQGLGAIHPHSLPDVHNGANNGTPYNLNT
ITPVGVNKNSRTAEAVDSRHLHKVGSGNLNGHSFDRAGEGAMGFSRSGSGHNCGHQLMWN
NSNNFHGHPNSPVLWQNPGSFVNNVPSRPPAQMHGVPRAPSHMIENVLPMHHHHVGSAPA
INPSLWDRRHGYAGDLTEASSFHPGSVGSMGFPGSPQLHGLELNSIFSHTGGSRMDPTVS
SAQISAPSQQRGPMFHGRNPMVPLPSFDSPGERMRSRRNDSGVNQSDNKRQYELDVDRIM
RGEDSRTTLMIKNIPNKYTSKMLLAAIDESHKGTYDFIYLPIDFKNKCNVGYAFINMTNP
QHIIPFYQSFNGKKWEKFNSEKVASLAYARIQGKTALIAHFQNSSLMNEDKRCRPILFHS
DGPNAGDQEPFPMGSNIRARSGRSRTSSGEENHHDIQTVLTNGDTSSNGADNSGPTKDTE

Transcript Sequence

Transcript ID

Zm00001d016606_T039
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:169943684:169949554:1 gene:Zm00001d016606 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MEI2-like 1
Sequence

GGAAGCAAGTCAGTTGCATCTTCTCCAATTGAAAAGCCCCAACCCATTGGGACAAAAACT
GTGGGTCGGGTAGAACCACAACCATACAAGCTGAGAGACCAGAAGACTGCATTTAGCCTT
GAGCACAAGACTTTTGGTCAAGAGAGACATGTTAACCTACCACCATCTCTGTGGAGAGCT
GATCAAGACCCTAACCTCCAATCTGATCCATCTTTATTTCCCGATGGAAGGAGGACTAGT
CCAAATGAGGCCTACAACGAGAATGGGCTTTTCTCAAGCTCCCTATCAGAAATTTTTGAC
AGAAAATTGGGACTGAGATCCATGGATGTGCGTCTACGCCAGCCAGTTCAAAAGGTTGAT
CTAACTCATGTAGATGATGAGCCCTTTGAGTTAACAGAGGAAATCGAGGCGCAAATAATA
GGAAACATACTTCCTGATGATGATGACCTACTATCAGATGTTCTTGATGTTGGGTACACA
GCCCATGCTAACATGGGTGATGATGTCGATGATGATATATTCTACACTGGAGGCGGGATG
GAACTGGAAACCGATGAAAATAAAAAAAATACAGAACTTAATGGAGCTAATGATGGTCTT
GGGTTGCTAAATGGCACAATGAATGGTGAACATCCATATGGGGAACACCCTTCAAGAACT
CTTTTTGTCCGAAACATTAATAGCAGCGTTGAGGATTCTGAATTAAAACTCCTATTTGAA
AATTATGGAGAAATCAGCAACCTTTACACTGCCTGCAAACATCGTGGTTTTGTGATGATA
TCTTACTATGACATAAGATCAGCATGGAATGCCATGAGGGCACTTCAAAACAAGCCACTC
AGACGTAGAAAACTTGACATACATTACTCCATTCCGAAGGACAATCCTTCGGAGAAGGAT
ATTAACCAGGGGATGCTTGTTGTATTTAATGTTGACCCCTCTATAACAAACAATGATATC
CATCAGATATTTAGCGAATATGGTGACATAAAAGAGCAGATTCGCGATGCACCGCAAAAG
GGCCATCACAAAATTATAGAATTTTATGATGTCAGAGCAGCCGAAGGTGCAGCTCGTGCT
TTAAACAGGAGTGATCTTGCTGGCAAGAAAATAAAACTGGAGACTGGCCGTCTGAGTGGT
GCTAGACGTTCAACACAGCACATGTCCAAGGAGTTGGGGCAGGAAGAATTTGGTGTATGC
AAACTGGGCAGTCCAAGCACAAATAGCCCTTCATTGCCTTCATTGGGTTCATCTAATATA
GCAGCAATGACATCTTGTGGACGTGAAAATGGGAGTATGCATGGTTTGCATTCTGGACTT
CTCACATCAATGAGCCCGTTCAGAGAGGCTTCATTTCTGGGTCTATCATCTACCCTACCA
CAGAGCCTGTCCTCTCCCATTGGAATTGCTTCTGCTGCAACTCATAGTAACCAGGCTCCC
CTTGGTGAGCTCAGCCACTCTCTTAGTCGGATGAATGGGCATGTGAATTATGGTTTTCAA
GGCTTGGGTGCTATTCATCCCCATTCTCTTCCTGATGTTCACAATGGAGCAAATAATGGC
ACCCCTTACAATCTGAACACCATCACACCTGTTGGTGTCAATAAGAACTCAAGAACAGCT
GAAGCAGTTGACAGCAGACATCTTCATAAAGTGGGTTCTGGCAATCTCAATGGGCACTCA
TTTGATCGTGCCGGTGAAGGAGCCATGGGATTTTCAAGAAGTGGAAGCGGTCATAACTGT
GGTCACCAGTTAATGTGGAATAATTCAAATAACTTCCACGGTCATCCCAATTCTCCTGTG
CTGTGGCAAAATCCCGGATCATTTGTAAATAATGTACCGTCTCGCCCCCCAGCACAAATG
CATGGAGTTCCAAGAGCACCATCACACATGATTGAGAATGTTCTTCCAATGCATCATCAT
CATGTGGGCTCTGCGCCAGCAATCAATCCGTCACTTTGGGACAGGCGGCATGGCTATGCA
GGGGACTTGACAGAAGCATCAAGTTTTCATCCTGGCAGTGTTGGGAGCATGGGATTTCCT
GGTAGCCCTCAGCTTCATGGTCTGGAGCTAAATAGCATATTTTCTCACACTGGTGGGAGT
CGCATGGATCCAACTGTGTCTTCAGCTCAGATCAGCGCACCATCTCAACAGAGAGGTCCT
ATGTTCCATGGAAGGAATCCTATGGTCCCCCTTCCTTCATTTGATTCACCTGGTGAGCGG
ATGAGAAGCCGGAGAAATGATTCAGGTGTTAACCAGTCTGATAATAAGCGGCAGTATGAG
CTTGATGTTGACCGCATAATGCGGGGGGAAGACTCACGAACTACACTGATGATAAAGAAT
ATCCCAAATAAGTATACCTCCAAGATGCTCTTGGCTGCTATTGATGAAAGTCATAAGGGC
ACTTATGATTTTATTTACTTGCCAATTGATTTTAAGAATAAATGTAATGTCGGCTATGCT
TTCATCAACATGACCAATCCTCAGCATATCATTCCGTTTTATCAGAGTTTTAATGGTAAA
AAGTGGGAGAAGTTTAACAGTGAGAAGGTGGCATCACTTGCTTATGCCAGAATCCAAGGG
AAAACAGCCCTGATTGCTCATTTCCAGAACTCTAGTTTGATGAATGAGGACAAACGCTGC
CGCCCCATACTTTTCCACTCAGATGGTCCTAATGCAGGAGATCAGGAACCTTTCCCCATG
GGTTCAAACATCCGAGCCAGGTCTGGGAGATCCCGGACTTCTTCGGGTGAAGAAAATCAC
CATGACATCCAGACAGTCTTGACCAACGGTGACACTTCTTCCAATGGAGCTGACAATTCA
GGTCCCACCAAGGATACTGAGTAGCTGAACTGCAGCTTGCTGCATCGCTAACCACAAAGG
CCCAAGTTATTACTTTTTGCAGACCTATTTTCAGTTCTAGCCCCTCCCTTCCCATTTCGA
TTTTGTTTGTTAAGTCCTCCCGATCTGTATTTATTAACTTGCATGATGCGGGTCACCGAA
GACTTAGGCTGCTGCAGAAGTTTTGTCTCTGGCGGGAAGCTATATGCAAGAGGGTGGTAC
CGGTTCGTTCCCCAGAATCTATGTGCTTGTTAACCTGAAGGCCGAGAAAGGCGAAAAGGC
GCAGGGAGAGCCTCCAGATTTTGGTCGCTGTAAGAATTAACCCCATGTTGTACAGCTGGT
CCCAGTAATTTGTGCTGAGGGGAGAGTGAAGGAGTCATTTGATCAGTTTTTAGTGGTGGT
GTGTGGAGAGGAAGAGTCTTGCCTGCTTTTCCTTTTTGAACTTTCTTTTGTGCCTTCACC
TGTGTTACATTTTGAGTCGAGGGCTCCTCTTAAATTGTGTGCAGAGGGGCTCGATTTTGT
TACCCCAGAACAAGGCGCATGTGCGTCGGCGTCGTCTTCTGCCACCGTATCTATCGACCT
TATGTACATCTTCATCTATATATAGTATGAGTTTTGATGTCAT