Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016601_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:5:169533673:169538727:-1 gene:Zm00001d016601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol/phosphatidylcholine transfer protein SFH10
Sequence	ATGAAGAGGGGGAGGAAGAGCAGCAAGGTGATGTCCATCTCGATTCTGGATGAGCGTGAA CCTGAGGAGGTGCAGGCTGTGGATGCCTTCCGCCAGCTTCTTGTACTTGAAGAGCTGCTA CCATCGCAGCATGATGACTACCACATGATGCTAAGATTTCTCAAGGCAAGAAAGTTTGAT ATCGAGAAGGCAAAGCAAATGTGGTCTGATATGCTGAAGTGGAGAAAGGAGTTCGGTGCA GATACCATTCTCGAGGAATTCGAATTCGAAGAAGCTGATAAGGTGGCAGAATGCTACCCT CAAGGTTACCATGGGGTTGATAAGGAAGGCAGGCCTGTCTACTTTGAACGGCTTGGACAG ATCGATGTGAATAGGCTAATGCAGGTCACTACAATGGATCGCTTTGTCAAGAACCATGTC AAGGAGTTCGAGAAGAACTTTGCTGTTAAGTTCCCAGCTTGCTCAATCGCCGCGAAGCAC CATATTGACCAGAGCACAACAATTCTTGACGTGCAAGGAGTGGGGATGAAGCAATTCAGT AAAGCTGCAAGGGAGCTCATTGGCATGCTTCAGAAGATTGATGGTGACAATTATCCAGAG ACCCTGTGCCGCATGTTCATCATCAATGCAGGCCAGGGATTCCGGCTTCTATGGGGCACC GTCAAGAGCTTTCTTGACCCAAAGACCACTGCAAAGATTCATGTTCTGGGTAACAAGTAT CAGAGCAAGCTTCTCGAGGTGATTGATGCTAGTGAGTTGCCAGAAATTTTTGGTGGAACC TGCCGATGTGAAGGTGGTTGCATGAAGGCTGACAAAGGCCCTTGGAAGGACCCCGAAATC ATGAAGATGGTTCAAAGTGGTGATGGGAGGTGTGGATCACTCGGTACGGCCTCTTTCGAG GCTCCGGAGAAAATGATTTGTGAAGACGACACGTATCCTAAGAAACAAGCTTTGTTTGAT GGGGAAACACAATTAGCTGGAGACGAGCATTCTCAGTCACAGAAAATTTCCCGTGGCCGG ATTGAACATCCTCACGTGTCACCTCTTCACGAGGAACTTATCCCCACTTCAATTCATACC CCTGGATCACCCTATTCTTGTGATGTCCCGATGGTTGAAGAGGCCATAGACGCCATCTGC AAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGCTATTATAAATGTA TCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCATAGCACTTGTGATGAGCATCGCA ACGATGGTCCGTCTGACCCGCAGCATGATGCCTGGGAAGGTTCTCGGTGCTGCCATAGGT GGAGCTACCCTCTCAGAAGGTAAATCAAAAGTACAAGAGCGCCAGCGGTCCAAGCTATCA GAAGAGGCTGTGGAGGAAGCTGAAGACGCCGTCTCTGCAAAGCGCCTCTCGGAGCTTGAG GAGAAGGTCATTGCACTCCTGACAAAACCCGCATCAATGCCTGCTGATAAGGAGGAGGTT CTGCAGGCTGCTGTCTCCCGCGTTAGTGCACTGGAAGAGGAGCTTGCAGCTACAAAGAAG ACCTTGCAGGAGACTCTTGAGCGTCAGTTGGAGATCGTTGCATACATTGAGAAGAAGAAG AAAAGCAAGCGTTTCTTTCGTTGGTAG

Peptide Sequence

PEP ID	Zm00001d016601_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:5:169533673:169538727:-1 gene:Zm00001d016601 transcript:Zm00001d016601_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol/phosphatidylcholine transfer protein SFH10
Sequence	MKRGRKSSKVMSISILDEREPEEVQAVDAFRQLLVLEELLPSQHDDYHMMLRFLKARKFD IEKAKQMWSDMLKWRKEFGADTILEEFEFEEADKVAECYPQGYHGVDKEGRPVYFERLGQ IDVNRLMQVTTMDRFVKNHVKEFEKNFAVKFPACSIAAKHHIDQSTTILDVQGVGMKQFS KAARELIGMLQKIDGDNYPETLCRMFIINAGQGFRLLWGTVKSFLDPKTTAKIHVLGNKY QSKLLEVIDASELPEIFGGTCRCEGGCMKADKGPWKDPEIMKMVQSGDGRCGSLGTASFE APEKMICEDDTYPKKQALFDGETQLAGDEHSQSQKISRGRIEHPHVSPLHEELIPTSIHT PGSPYSCDVPMVEEAIDAICKSHGTPPDEKIAITKAIINVSNGSKPPLFAGIIALVMSIA TMVRLTRSMMPGKVLGAAIGGATLSEGKSKVQERQRSKLSEEAVEEAEDAVSAKRLSELE EKVIALLTKPASMPADKEEVLQAAVSRVSALEEELAATKKTLQETLERQLEIVAYIEKKK KSKRFFRW

Transcript Sequence

Transcript ID	Zm00001d016601_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:169533673:169538727:-1 gene:Zm00001d016601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol/phosphatidylcholine transfer protein SFH10
Sequence	ACATTGGCCTCACTCAAGGCCGCTTGCGTGTTCTTCCTTCTCGTGCTCTGTTCTATGCAC ACGTTCTAGGTTTTGATCCCATCATTGCTAATCGTCAGGATCTCATGAACACCGTCTAAG CTCTGCCTTAGATGGACACTACGACGAGAAGAGGAAATCCAATGTGGAATACACAGAGGA CGAGAAGAAAGCCGTGATCGCGGCTCTGAAAAAGAAGGCTTTGAGCGCCTCACAGAAGTT TAGGCATTCCATGAAGAGGGGGAGGAAGAGCAGCAAGGTGATGTCCATCTCGATTCTGGA TGAGCGTGAACCTGAGGAGGTGCAGGCTGTGGATGCCTTCCGCCAGCTTCTTGTACTTGA AGAGCTGCTACCATCGCAGCATGATGACTACCACATGATGCTAAGATTTCTCAAGGCAAG AAAGTTTGATATCGAGAAGGCAAAGCAAATGTGGTCTGATATGCTGAAGTGGAGAAAGGA GTTCGGTGCAGATACCATTCTCGAGGAATTCGAATTCGAAGAAGCTGATAAGGTGGCAGA ATGCTACCCTCAAGGTTACCATGGGGTTGATAAGGAAGGCAGGCCTGTCTACTTTGAACG GCTTGGACAGATCGATGTGAATAGGCTAATGCAGGTCACTACAATGGATCGCTTTGTCAA GAACCATGTCAAGGAGTTCGAGAAGAACTTTGCTGTTAAGTTCCCAGCTTGCTCAATCGC CGCGAAGCACCATATTGACCAGAGCACAACAATTCTTGACGTGCAAGGAGTGGGGATGAA GCAATTCAGTAAAGCTGCAAGGGAGCTCATTGGCATGCTTCAGAAGATTGATGGTGACAA TTATCCAGAGACCCTGTGCCGCATGTTCATCATCAATGCAGGCCAGGGATTCCGGCTTCT ATGGGGCACCGTCAAGAGCTTTCTTGACCCAAAGACCACTGCAAAGATTCATGTTCTGGG TAACAAGTATCAGAGCAAGCTTCTCGAGGTGATTGATGCTAGTGAGTTGCCAGAAATTTT TGGTGGAACCTGCCGATGTGAAGGTGGTTGCATGAAGGCTGACAAAGGCCCTTGGAAGGA CCCCGAAATCATGAAGATGGTTCAAAGTGGTGATGGGAGGTGTGGATCACTCGGTACGGC CTCTTTCGAGGCTCCGGAGAAAATGATTTGTGAAGACGACACGTATCCTAAGAAACAAGC TTTGTTTGATGGGGAAACACAATTAGCTGGAGACGAGCATTCTCAGTCACAGAAAATTTC CCGTGGCCGGATTGAACATCCTCACGTGTCACCTCTTCACGAGGAACTTATCCCCACTTC AATTCATACCCCTGGATCACCCTATTCTTGTGATGTCCCGATGGTTGAAGAGGCCATAGA CGCCATCTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGCTAT TATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCATAGCACTTGTGAT GAGCATCGCAACGATGGTCCGTCTGACCCGCAGCATGATGCCTGGGAAGGTTCTCGGTGC TGCCATAGGTGGAGCTACCCTCTCAGAAGGTAAATCAAAAGTACAAGAGCGCCAGCGGTC CAAGCTATCAGAAGAGGCTGTGGAGGAAGCTGAAGACGCCGTCTCTGCAAAGCGCCTCTC GGAGCTTGAGGAGAAGGTCATTGCACTCCTGACAAAACCCGCATCAATGCCTGCTGATAA GGAGGAGGTTCTGCAGGCTGCTGTCTCCCGCGTTAGTGCACTGGAAGAGGAGCTTGCAGC TACAAAGAAGACCTTGCAGGAGACTCTTGAGCGTCAGTTGGAGATCGTTGCATACATTGA GAAGAAGAAGAAAAGCAAGCGTTTCTTTCGTTGGTAGAAGCAAACAGCAGTGAATTGTTC ACGCCCACGAGAAAAAAGGTTTTGCGTGTGATGGAAGCGAGCTGGTGCTTGCGTATGCCA GCAAGCTGCGATTCTGAGTGTAACACATAAGGATGTTCTTTCATTCTTCTTTTTTGTTCC CTTGTTGCATCAAATTGTGCCTTAACCACGTCGATGTGCTGCCAAATTGTCAATCCCTGA TACGGTCAATCATGGATGGACCGACTGCAATATAAATATATTATAC