Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016581_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:5:168245012:168255241:1 gene:Zm00001d016581 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase epsilon catalytic subunit A
Sequence	ATGAGTAAATCTTTAGTTGACTACGGAGAGCAGAAGTCTTGTGCTGTAACTACAGCAAAA AGACTTGCCGAATTTCTTGGAGATTCGATGGTTAAAGACAAAGGACTACATTGCCAATAT ATTGTTGCTCGGGAGCCACAAGGCACTCCAGTGAGCGAGCGTGCTGTTCCGGTAGCTATA TTCGAGACAGATCCTGAGATCGCAAAGCATTATTTAAGGAAATGGTTTAGATTCTCCTCT GATGCAAACATTCGATCTATTGTTGATTGGTCTTACTACAAGCAACGCTTAAGTTCAGCT ATTCAGAAAATCATTACAATTCCTGCAGCAATGCAAAAGATCTCAAATCCTGTTCCTCGA GTTCTTCATCCAGATTGGTTACACAAAAAGGTCAGGGAGAAAGATGATCGATTTCGGCAG CGTAAACTGCGTGATATCTTCAGTCCCTTGGCTAAAGAAGAGGGGCTGCATAACTTGAAT AGGACTGGAGATATGGAAGATTTATTAATTTCAAACAAGGATTTGAGGAAAAATCCTTCT CATGGTTTAGACATTGACAAAGAAAACAATCCAAATGGAGCATCAGTGGGATCTGGTTTG AATATTAGTAAAAAACAACAAAACTGTATGACTGGGTTAAATGTTCCTTGCACTTCACAA ATCCAAAATGCTGCTTCTTATGAAACAGTTGATAAGGGTACTGACTATCAAGGATGGCTT GATGCTAAGAAAAGAAAATGGAAATATGTCCGTGAACAAAAAAAACGTCGAAGGTTGGGT GCTGCCGCCACTTTTGACGATCCTAACGCTTTGCTCTCGGCCAGACATGCCAATCAGCTA CCTGTCAACAGTCGGAATAGATCTACATTTTTCCAGAAACAAGAATTGGCCCTCTTTAGA TCACATTGGCAGATAATCCAGCTTGCTTCAAGTACAGTGCCTGGTCACTTTTTTGCGTGG GTTGTTGCTGAAGGGATTATGTTCAAGATTCCTATTAATGTGCCTAGAACTTTTTACCTA AACTCAAAGGCTCCTGTCACAGAAGAGTTTCCAGGAAGGCGTGTCAAAAAGATTCTCCCA CATGGTAGACCTTGTTTCAACCTTATTGAGGTTGTAACAACTGAAGAACAGTTCAGGGCT GAAGGCAAAAAACTTGCAGCTCATCTAGCAGAGCCAGATGTTGAGGGAATATACGAGACA AAAATTCCACCAGAGCTCAATGCTGTTCTCCAAATCGGATGTGTCTGCAAAGTGGACAAG TCTGCAAAAAGACGAAGTATACAAGATGGATGGGATCTAGCCGAGTTGCAAATGAAAACA ACCGCCGAGTGCTCATATCTGGAACAGACATTTTCATTTTTCTATTTATACCACAGCTTG AGTGAAGGAAGGGCTGTATATGTATTTTACTTCCCCACGTCTTTCCGAATACATGCAGTG ATTGTCAATCCTTTCCGTAACAAAGAAATATCTCCGTCATTTCTTGAAAAGCAATTTGGA GATGCTTGCCAAGCCCTTGGTTCTGTCCCTGAGAATCTGTCTTTCCATGTGGACTACCAA ACATCAATTGATGCTGGAAGCAAATACGCACAAAGAATGTTACTTGAGTACAGGCAACAA CATTCTGGACCTGTCGTAGGCATCATAGAGTGCCCTAAGCTCCAAGCTATAAAGGTAGCT ATACGAGCACTTGATGATTTGCCATGTGTAACCATTCCTAGCAATGCACGTGACAACAAC TATCAGGCTCTTGGCTGGCAAGCAACAGCTGGCCGAACAAGTATGCAGCGTTGTGCTGCA TCAACCCAATGGTTCAATGAACGGATTTCACTCGCTAAATATGCACATGTGCCACTGGGT AATTTTGAACTAGACTGGCTTCTTTTTACTGCCGATGTATTCTTTTCAAGGGCATTGCGT GATCAACAGCAGGTACTATGGATATCTGATGATGGCATTCCTGATTTAGGAGGCACTTAT GAAGGAGAGACATGTTTTGCTGATGAAGTCATTCAGCCTGCACTTACTTATCCTGGTGCA TATAGAAGAGTTTCTGTTGAGCTTAAGATCCACCATTTGGCGGTTAATGCTCTCCTAAAG AGTAGTCAAGTGGACGAAATGGAAGGAGGATCAATCGGTAGCTTTGGAAACGACGTGCCT CCGGGTTCAAATGCCACTGAAACTGACTTTGATGATGCTAGCTTATGTATACCTGCTTTC CAGGTGCTAAAGCAACTTATTCAAAGATGCATTTCAGATGCAGTGTCGTCTGGAAATGTA TTTGCTGATGCAATATTGCAACATCTCTACCGCTGGCTTTGCAGCCCACGATCGAAACTT CATGATCCAGCTCTCCATCGTCTTCTTCATAATGTGATGAAGAAAGTCTTTGCTCTATTG TTGGCCGAGTTACGAAAGCTGGGGGCTAATGTTATTTTTGCAAACTTTTCTAAGATAATC ATAGATACTGGAAAAGTAGATTTGTCATCTGCACATGCATATTGTGACAGCTTATTAAGG ACCTTGCAGACGAGGGACCTCTTCGAGTGGATAGAATTGGAACCATTGCACTTTTGGCAT TCCTTACTGTTCATGGATCAGTATAACTATGGCGGAATTCAAGCTAAAACACAAAACGTA GACTCTTCAGATGGTGATAATGATATTGATATTGTCTCAAGCTGGAACATGGCAGAAGAT TTGCCCAAAGATACACAGGATCATTTTGTCTTAATCGTATCAGAATTCCTATATATTCCG TGGAAATTCATGAAGGAACAAGTAGCTGCTCAAGCTACCATAAGGGATGATACCTCATGC ACTCCATCTGTAACAATCATGGCTGCTGAGAATCTTGAGGGCCAGGTGATAGAACACCTC CGCTTCTAA

Peptide Sequence

PEP ID	Zm00001d016581_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:5:168245012:168255241:1 gene:Zm00001d016581 transcript:Zm00001d016581_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase epsilon catalytic subunit A
Sequence	MSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSERAVPVAI FETDPEIAKHYLRKWFRFSSDANIRSIVDWSYYKQRLSSAIQKIITIPAAMQKISNPVPR VLHPDWLHKKVREKDDRFRQRKLRDIFSPLAKEEGLHNLNRTGDMEDLLISNKDLRKNPS HGLDIDKENNPNGASVGSGLNISKKQQNCMTGLNVPCTSQIQNAASYETVDKGTDYQGWL DAKKRKWKYVREQKKRRRLGAAATFDDPNALLSARHANQLPVNSRNRSTFFQKQELALFR SHWQIIQLASSTVPGHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILP HGRPCFNLIEVVTTEEQFRAEGKKLAAHLAEPDVEGIYETKIPPELNAVLQIGCVCKVDK SAKRRSIQDGWDLAELQMKTTAECSYLEQTFSFFYLYHSLSEGRAVYVFYFPTSFRIHAV IVNPFRNKEISPSFLEKQFGDACQALGSVPENLSFHVDYQTSIDAGSKYAQRMLLEYRQQ HSGPVVGIIECPKLQAIKVAIRALDDLPCVTIPSNARDNNYQALGWQATAGRTSMQRCAA STQWFNERISLAKYAHVPLGNFELDWLLFTADVFFSRALRDQQQVLWISDDGIPDLGGTY EGETCFADEVIQPALTYPGAYRRVSVELKIHHLAVNALLKSSQVDEMEGGSIGSFGNDVP PGSNATETDFDDASLCIPAFQVLKQLIQRCISDAVSSGNVFADAILQHLYRWLCSPRSKL HDPALHRLLHNVMKKVFALLLAELRKLGANVIFANFSKIIIDTGKVDLSSAHAYCDSLLR TLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAKTQNVDSSDGDNDIDIVSSWNMAED LPKDTQDHFVLIVSEFLYIPWKFMKEQVAAQATIRDDTSCTPSVTIMAAENLEGQVIEHL RF

Transcript Sequence

Transcript ID	Zm00001d016581_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:168245012:168255241:1 gene:Zm00001d016581 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase epsilon catalytic subunit A
Sequence	GGAGGAATGCTATTCTGCTGTTGCCTCTGTTGCTAACCGGTGGTTGGACCTACTGGATAA TCAAGGAATTGATATTGCTGACAGTGAATTGCTTGATTTCATATCGGAGTCGAGCACAAT GAGTAAATCTTTAGTTGACTACGGAGAGCAGAAGTCTTGTGCTGTAACTACAGCAAAAAG ACTTGCCGAATTTCTTGGAGATTCGATGGTTAAAGACAAAGGACTACATTGCCAATATAT TGTTGCTCGGGAGCCACAAGGCACTCCAGTGAGCGAGCGTGCTGTTCCGGTAGCTATATT CGAGACAGATCCTGAGATCGCAAAGCATTATTTAAGGAAATGGTTTAGATTCTCCTCTGA TGCAAACATTCGATCTATTGTTGATTGGTCTTACTACAAGCAACGCTTAAGTTCAGCTAT TCAGAAAATCATTACAATTCCTGCAGCAATGCAAAAGATCTCAAATCCTGTTCCTCGAGT TCTTCATCCAGATTGGTTACACAAAAAGGTCAGGGAGAAAGATGATCGATTTCGGCAGCG TAAACTGCGTGATATCTTCAGTCCCTTGGCTAAAGAAGAGGGGCTGCATAACTTGAATAG GACTGGAGATATGGAAGATTTATTAATTTCAAACAAGGATTTGAGGAAAAATCCTTCTCA TGGTTTAGACATTGACAAAGAAAACAATCCAAATGGAGCATCAGTGGGATCTGGTTTGAA TATTAGTAAAAAACAACAAAACTGTATGACTGGGTTAAATGTTCCTTGCACTTCACAAAT CCAAAATGCTGCTTCTTATGAAACAGTTGATAAGGGTACTGACTATCAAGGATGGCTTGA TGCTAAGAAAAGAAAATGGAAATATGTCCGTGAACAAAAAAAACGTCGAAGGTTGGGTGC TGCCGCCACTTTTGACGATCCTAACGCTTTGCTCTCGGCCAGACATGCCAATCAGCTACC TGTCAACAGTCGGAATAGATCTACATTTTTCCAGAAACAAGAATTGGCCCTCTTTAGATC ACATTGGCAGATAATCCAGCTTGCTTCAAGTACAGTGCCTGGTCACTTTTTTGCGTGGGT TGTTGCTGAAGGGATTATGTTCAAGATTCCTATTAATGTGCCTAGAACTTTTTACCTAAA CTCAAAGGCTCCTGTCACAGAAGAGTTTCCAGGAAGGCGTGTCAAAAAGATTCTCCCACA TGGTAGACCTTGTTTCAACCTTATTGAGGTTGTAACAACTGAAGAACAGTTCAGGGCTGA AGGCAAAAAACTTGCAGCTCATCTAGCAGAGCCAGATGTTGAGGGAATATACGAGACAAA AATTCCACCAGAGCTCAATGCTGTTCTCCAAATCGGATGTGTCTGCAAAGTGGACAAGTC TGCAAAAAGACGAAGTATACAAGATGGATGGGATCTAGCCGAGTTGCAAATGAAAACAAC CGCCGAGTGCTCATATCTGGAACAGACATTTTCATTTTTCTATTTATACCACAGCTTGAG TGAAGGAAGGGCTGTATATGTATTTTACTTCCCCACGTCTTTCCGAATACATGCAGTGAT TGTCAATCCTTTCCGTAACAAAGAAATATCTCCGTCATTTCTTGAAAAGCAATTTGGAGA TGCTTGCCAAGCCCTTGGTTCTGTCCCTGAGAATCTGTCTTTCCATGTGGACTACCAAAC ATCAATTGATGCTGGAAGCAAATACGCACAAAGAATGTTACTTGAGTACAGGCAACAACA TTCTGGACCTGTCGTAGGCATCATAGAGTGCCCTAAGCTCCAAGCTATAAAGGTAGCTAT ACGAGCACTTGATGATTTGCCATGTGTAACCATTCCTAGCAATGCACGTGACAACAACTA TCAGGCTCTTGGCTGGCAAGCAACAGCTGGCCGAACAAGTATGCAGCGTTGTGCTGCATC AACCCAATGGTTCAATGAACGGATTTCACTCGCTAAATATGCACATGTGCCACTGGGTAA TTTTGAACTAGACTGGCTTCTTTTTACTGCCGATGTATTCTTTTCAAGGGCATTGCGTGA TCAACAGCAGGTACTATGGATATCTGATGATGGCATTCCTGATTTAGGAGGCACTTATGA AGGAGAGACATGTTTTGCTGATGAAGTCATTCAGCCTGCACTTACTTATCCTGGTGCATA TAGAAGAGTTTCTGTTGAGCTTAAGATCCACCATTTGGCGGTTAATGCTCTCCTAAAGAG TAGTCAAGTGGACGAAATGGAAGGAGGATCAATCGGTAGCTTTGGAAACGACGTGCCTCC GGGTTCAAATGCCACTGAAACTGACTTTGATGATGCTAGCTTATGTATACCTGCTTTCCA GGTGCTAAAGCAACTTATTCAAAGATGCATTTCAGATGCAGTGTCGTCTGGAAATGTATT TGCTGATGCAATATTGCAACATCTCTACCGCTGGCTTTGCAGCCCACGATCGAAACTTCA TGATCCAGCTCTCCATCGTCTTCTTCATAATGTGATGAAGAAAGTCTTTGCTCTATTGTT GGCCGAGTTACGAAAGCTGGGGGCTAATGTTATTTTTGCAAACTTTTCTAAGATAATCAT AGATACTGGAAAAGTAGATTTGTCATCTGCACATGCATATTGTGACAGCTTATTAAGGAC CTTGCAGACGAGGGACCTCTTCGAGTGGATAGAATTGGAACCATTGCACTTTTGGCATTC CTTACTGTTCATGGATCAGTATAACTATGGCGGAATTCAAGCTAAAACACAAAACGTAGA CTCTTCAGATGGTGATAATGATATTGATATTGTCTCAAGCTGGAACATGGCAGAAGATTT GCCCAAAGATACACAGGATCATTTTGTCTTAATCGTATCAGAATTCCTATATATTCCGTG GAAATTCATGAAGGAACAAGTAGCTGCTCAAGCTACCATAAGGGATGATACCTCATGCAC TCCATCTGTAACAATCATGGCTGCTGAGAATCTTGAGGGCCAGGTGATAGAACACCTCCG CTTCTAAGAACTGTAAGTGATATACTTCACCATTTCAAAGGGAAAAGCAAACATGAGTCA GATGAACCTGCAAAATCTGATCCTCACACGCATAAAGGCGATGCTGCATTGGAGTTCATT AAGCATATCTGTGCAGTTCTTGCTCTTGATCAAAATGTTCAGCATGATATTTTGAGAATG AGGAAGAACCTGTTAAAGTTAGTTCGTGTAAAGGAGTTTGCTCCAGAAGCACAATTCCAA GACCCATGCGCCTCATTCACTCTGCCAAATGTGATCTGCAGCTATTGCAACGATTGCCGG GACCTGGATCTCTGCCGCGACTCGGCACTCCAGGGCCAGGAGTGGAGATGCGCGGTGCCG CAGTGCGGGCAGCCGTACCACCGCGAGCAGATGGAGAACGCGCTTCTGCAGGTGGTCCGG CAGCGAGAGAGGCTGTACCACCTGCAGGACCTGGTGTGCGTGCGCTGCAGGCAGGTGAAG GCCGCCCATCTGTCGGAGCAGTGTTCCTGCGGGGGCTCCTTCCGGTGCAAGGAGGAGCCT TCGTATTTCCTCAGCAAAATGCGGGTGTTCCTGAAGGTGGCGGTGAGCCAAAAGTTCCCG CTCCTGCAGGACTGCGTGCAGTGGATTCTTGAAGCCAGATGACGCGGGCTGCTACTTCAA CATAGTTCATTAGTTCACCTGATCGCTAGGTTGTACAACGTGCACAGGCTGTAGCTCCGA AGAGTGTATAAACGGGTGTATAGCGCTGCCACAGTTCATTGTAGCTCTGCCCTGCTTGCA AAAGGTTGTTGTTGTATTGTAGATATTCAAAGGTGGATGGCGAGAAACGATAGTAACCTT GGTATCGAAACATCTGGATAACTAGCCCT