Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016543_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:5:166724867:166730893:1 gene:Zm00001d016543 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0548 protein
Sequence	ATGTGTTTTCTGTTTTCTACCCTAATGATGTGTTCTGGTCTTTTTGGAAGGTGTGTTTTC AGTGGCTCTCTGAGAACAACATGTTTTCTGTTCTTGTGCATGGGCCGCCCCACGCAGGAG CAACAGAAGTCCTGCCTTGCAGCCGCTGGTGGCTTCAACTACGACACAGCTCTCCAAGGC GCCACACGCCCAAAGTCAGTGTCTACCTTGACCTCTGACGAAGCTGGTGGCGAAATAGGT GACAAGGATCTTACCGAGCGTGGATTCTTTGTGAACCGATCGCGTGTTCTGGTCGGCTCA GGTTCTGACGCCTTTGTCCATGCCAAATCTGCCCTCCTCTCATGGAGGTATATAAGGATC TTGGCTTTAGGGTGGGCGAACGTGGAACCGGACACCCCGGTGAAGGTAGGTACAAGGTTC TGCATCTGCTACAAGGAGTTGATCCCCTGGGTGACGCTGCCGCTTCAGATAGCGTATGTG ACCGACGTCGATTCAGACACGTCCAAAGGGTGCTCCCGGTCCAAGATGTTTGCCTTCGGC AGCGGCACTCTACAGGGCCATCTGCAGGCCGGAGAGGAGCGGTTCTCGGTACAGGTGGAC GAGGAGGAGAGGGTGTGGTACGAGGTGCTTTCTTTCTCGAAGCCGGCGCACGTCCTGGCG ACGCTGTGCTACCCGTATGTGCAGCTGAGGCAGAAGCATTTCGCGCAGCAGTCGGGACAG GCGCTCGTCAGGCATGTGTCCACCTGCTCTTCCAAGCAGAAGCAGTAG

Peptide Sequence

PEP ID	Zm00001d016543_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:5:166724867:166730893:1 gene:Zm00001d016543 transcript:Zm00001d016543_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0548 protein
Sequence	MCFLFSTLMMCSGLFGRCVFSGSLRTTCFLFLCMGRPTQEQQKSCLAAAGGFNYDTALQG ATRPKSVSTLTSDEAGGEIGDKDLTERGFFVNRSRVLVGSGSDAFVHAKSALLSWRYIRI LALGWANVEPDTPVKVGTRFCICYKELIPWVTLPLQIAYVTDVDSDTSKGCSRSKMFAFG SGTLQGHLQAGEERFSVQVDEEERVWYEVLSFSKPAHVLATLCYPYVQLRQKHFAQQSGQ ALVRHVSTCSSKQKQ

Transcript Sequence

Transcript ID	Zm00001d016543_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:166724867:166730893:1 gene:Zm00001d016543 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0548 protein
Sequence	GTGCCTCACCTCGACAGCAGCCTTCCCTCGCGACAGGGTGAGCACCCTTCCCCCACCTCG CTGCTTCTGACCCGCGAGCCGCGCTGAGGAGATCTCGAGGTGCCCTCCTCCGCCTCGGCG GGCTCGCCTGCCTTGCGGGTCGCGGTCGCGTCGCGGATGGACCTTCTGACTTGTCCGGTT CTCCCCGCCCCTGCGTGCGCTGCGAGCTCGGCTGCGTGCCTTCGTGAGAGGGGGTGCGAA CGGCCAGATGGGGATCTAATCAGACAAGCGAACGAGGACGGGAACGGGCACGGGGGTGCC GCGCCCGCGATATCCGTCGTCCCCGGCGAGGCGGCGACACTGCTGCTGTAGGTGCGAGCC GTAGCTACTGGCCTGCCGTAGCTACTGTAGGCGGCGACACTGCTGTAGGTGCGCCCGCGA CAATTGCATTCTTACAATTGCCTCTGATTATTGACAACGCTCTGCAGATCAGTTTCCTCT TGCAATATAACAAAGTTCAATCCTGGTAGATGCACGAAAAGACACTCCGCAGAGGAAATT TACCATGAAACTCAAACCCGAACAGCCTCCATGTATCCTCACAGCAAGAAAGATATCTAG ATTTCATATATTCAGCAATTTCATCGATACCATCAGAGCTAGTCTTTTCTTGATCTACTG TACCGTCACCCTTTGTAGATTCTGAAGCAGATGACTCACGATTCTTGAACCTCATTCTAT GCACAGTCAAATCCTTTGTTGACATACTTAATAGACACTTGATCAGATAGGTTTGGTTAC AGGCCTCAACATCAATATGTGCCTGGCATTTCTTGAGCACAGTGCACAGATAGACTATGT GGCACAACCCATAGACTATCTACTTGTACATTCCCTTTCCAGGCAAGAATACCATTTTTC TGCGCCTGTATAGTGGGTAGCCAGCTTCGTAAAAAAAAAACTGTTTCAGATCTAAATGAC TTAGGCCTTTTAAACAATAGCCATCTCTCGTGCAAGGACTATTTGGATTAGCTGAACCAC ACGGGTCTTGTATCATAAACTCTTCAACCAGGAAGAATCCTAACGGATCAGCACTAGGAT CAGGTAACTCAGCAGATATATATCTATCAACGTTAAGATTCGATTTGCTGGTCAGCGAGT CAAAATGGCTCGCCCAGCTGGACCAGCTCATGTGGAACCATGCCTAGGAGCTCTCCAGCT GAGAACCGTTGGCCAAATAAATCCTTTTGTTGGGTGTGGATCAGCTCATGTGGAACCATG CCTACCTTGCCTGCTCACTTGTGAAAGACGAATGTTCCCCCAGTGCATATTTGCATTGCA TTCTATATTCGCATTGCATTGCTTTATTTAATTTGCCGGTCTTGCATGCACCGTATACAT ATACATATCATTCTGTTCACCTGTTCTTCTTTGAATTAGTGATATATATATATATATAAT GTTTTGTCAAGTGTGCTTATGATGTATGGTTTATCTGCTGTAGATGTCTCACAACAACTT AGAATTGGTTAGAAGAAATTTGGAGGAAATGAGAGAGAGGCGTAGGAAGAAGAGGCTGAG AGTAGCATCCTTATTTGTTGCAACTGTCATGGGCATGATTGCGGAATATTATTATCGGAA AAGACCTAGACATCTTATGGATCCCTCTGAGGTGATAGAGAGAGATGTAGCTGGTCGGAA ACAAATGCTAAGGAATCTGTATCAAGGATCAAATGTTTATTGCTATGACAGTTTGCGTCT AACTAAGAGATCCTTTTCGGACCTATGCACTATCTTACGTGAGAGGTGCGATATGTGTGA CACCTTGAATGTGTCGGTAGAAGAAAAGGTTGCTATCTTTTTGCTTGTAGTGGGTCATGG CACTAAGATGAGGATGATTCGTAGCTCATACGGGTGGTCACTTGAATCAATTAGACGCTA TTTTAATGAGGTGTTGAGAGGTGTTCTATCATTATGCCATGAATTTATCAAGCTTCCTGA TCCACACTATCATCAATGGTATGCTACAAACAAGTGGCTTTGGTTGGGATTGGAACAAGA ACAAGATATCCGTCGATAGTGATTCTGTATGGGAGGCTTATGTGGCGGTAAGTTTCAGTT TTTTTCTGCTGTTACAACTTAATAGACTAAAGAGACTACAGAAATTCTGGATTAGCAGTC ATTTTCCAGAAAAAAAACTTCATGTTTGATTTCTATTGGCTGCACAGGAATAAAAGAATA AAAATAAAGAGAAATCTAGACAGCTGTTGTTTAGTGCAGATAGTGGATTGTGCATGCTTC TGTCCATTTTTTTCTTTGGTGCATTTCCCCAGATCTTCTTTGGAGTTGGCAGTAGTCGTA ACTAGTAACGATGTATTTGCCTGCTGTCGGTAGACTATATATGCCGACAAGGAGCTGGGA GAAGTTCTTAGAGATGTACTGTAATATTCGAGTATCTTGGAGATCTCCACATGTCGTCTC GATGCGTATCTTTTGACTGGAAATCACTTTTGAGTGTACTTGTGCCAGTTGATTAATTAA TTAGTAGGGCAGCCATCACCTTTTGTGGTGTGTGTCTTGGGTTGGGACATGTCGTCGTCT AGCATTTCTTTGTGTGGTTAGTGGCATTATCTAGCATGTCGTCGTCTTTGCCTAATTAAT TGCCAGCCAAGAGCAAGACATTATGGTCATATATAGGGCTTGCCTGCTGCTTGCCACCTG AAGACGACTGATCCTAGTATTATTATGAAACATGTGTTTTCTGTTTTCTACCCTAATGAT GTGTTCTGGTCTTTTTGGAAGGTGTGTTTTCAGTGGCTCTCTGAGAACAACATGTTTTCT GTTCTTGTGCATGGGCCGCCCCACGCAGGAGCAACAGAAGTCCTGCCTTGCAGCCGCTGG TGGCTTCAACTACGACACAGCTCTCCAAGGCGCCACACGCCCAAAGTCAGTGTCTACCTT GACCTCTGACGAAGCTGGTGGCGAAATAGGTGACAAGGATCTTACCGAGCGTGGATTCTT TGTGAACCGATCGCGTGTTCTGGTCGGCTCAGGTTCTGACGCCTTTGTCCATGCCAAATC TGCCCTCCTCTCATGGAGGTATATAAGGATCTTGGCTTTAGGGTGGGCGAACGTGGAACC GGACACCCCGGTGAAGGTAGGTACAAGGTTCTGCATCTGCTACAAGGAGTTGATCCCCTG GGTGACGCTGCCGCTTCAGATAGCGTATGTGACCGACGTCGATTCAGACACGTCCAAAGG GTGCTCCCGGTCCAAGATGTTTGCCTTCGGCAGCGGCACTCTACAGGGCCATCTGCAGGC CGGAGAGGAGCGGTTCTCGGTACAGGTGGACGAGGAGGAGAGGGTGTGGTACGAGGTGCT TTCTTTCTCGAAGCCGGCGCACGTCCTGGCGACGCTGTGCTACCCGTATGTGCAGCTGAG GCAGAAGCATTTCGCGCAGCAGTCGGGACAGGCGCTCGTCAGGCATGTGTCCACCTGCTC TTCCAAGCAGAAGCAGTAGTAGAGCTTTGTGGAGATGCACTGCACAGAGAATGCTGTATG TATTCCCCCTTTGAATTCTATTCCGACATGGCCTGGTTTGGCGGCGCTGGGGCCTGGGTG GGATGATATATGTTCGGGCATTCCGAGTGGAGTTTGCCCATCC