Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016530_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:166555551:166563550:1 gene:Zm00001d016530 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable magnesium transporter NIPA2
Sequence	ATGGTGGCGTCTTTAGACAATGTGAGGGGCTTGACTTTAGCCATGTCATCTAGTGCATTC ATTGGTTCTAGCTTTGTGATCAAGAAAGTTGGATTGAAGAAGGCTGGGGATAATGGGGTG CGTGCAGCTTCTGGAGGCTTCTCATATCTATATGAGCCGTTATGGTGGTTGGGAATGATA ACTATGATTCTAGGCGAGGTAGCCAATTTTGCAGCATATGCATTTGCCCCTGCCGTACTT GTTACTCCTCTAGGAGCTCTAAGCATCATATTTAGTGCAGTGCTCGCACACTTCATTCTG AAAGAAAATTTGCACATGTTTGGCGTTGTTGGTTGCATACTATGTGTTGTTGGTTCTGTT GGTATAGTTTTGCATGCCCCAAAGGAGAGAAAAATTGATTCTATGAAGGAAATATGGCAT CTTGCAACACAGCCAGGTTTTATTGTTTATTCATGCGTGGCAGTGGCCTGCGTTCTTTTT TTGATATTTCGGGTTGTTGAGCGCTCTGGGCACAGATTGATGCTTGTTTACATAGCAATC TGTTCATTAATGGGATCTCTTACGGTTATCAGTGTAAAAGCAGTTGCTATTGCTTTAAAG CTATCATTTGGTGGATCAAATCAATTCATCTACGTCCAGACATGGTTCTTCATAGTAGTA GTCACTATTTGCTGCTTGGTGCAATTAAACTACTTAAACAAGGCTCTGGACTCGTTCAAC ACGGCTGTGGTTTCTCCTGTATACTACGTGATGTTCACCATTCTTACCATTGTTGCAAAC ATGATCATGTACAAGGACTGGGCCTCGCAGACTGCAACGCAGATCGCAACACAGCTATGT GGGTTTGTGACCATTGTCGCGGGGACTTTTCTGCTTCACAAGACTAGGGATATGGGAAAT CCACCACCACCACCACCTGACCAAATGTGCCTGCAAGAAGCCGGGGAATGTGCTCCACGG TCAATGACCAGTTCTAGCTGA

Peptide Sequence

PEP ID	Zm00001d016530_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:166555551:166563550:1 gene:Zm00001d016530 transcript:Zm00001d016530_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable magnesium transporter NIPA2
Sequence	MVASLDNVRGLTLAMSSSAFIGSSFVIKKVGLKKAGDNGVRAASGGFSYLYEPLWWLGMI TMILGEVANFAAYAFAPAVLVTPLGALSIIFSAVLAHFILKENLHMFGVVGCILCVVGSV GIVLHAPKERKIDSMKEIWHLATQPGFIVYSCVAVACVLFLIFRVVERSGHRLMLVYIAI CSLMGSLTVISVKAVAIALKLSFGGSNQFIYVQTWFFIVVVTICCLVQLNYLNKALDSFN TAVVSPVYYVMFTILTIVANMIMYKDWASQTATQIATQLCGFVTIVAGTFLLHKTRDMGN PPPPPPDQMCLQEAGECAPRSMTSSS

Transcript Sequence

Transcript ID	Zm00001d016530_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:166555551:166563550:1 gene:Zm00001d016530 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable magnesium transporter NIPA2
Sequence	GCCGCTCCCTCGCCTCATCCCTTCCCTCCTCCTGCATCCTACCTCCCTGGTGCCCGTCAC GTTCACCACGTTCGCCCGCTCATTCACCGGCGGCGTCGCCCAGCTCGGCCTCCCGCCGCC CACGGAGGCCAGGTCCCCGGGCCGCCCGCTCGGTCCGCCACGGAGGCAAGGCATGGTGGC GTCTTTAGACAATGTGAGGGGCTTGACTTTAGCCATGTCATCTAGTGCATTCATTGGTTC TAGCTTTGTGATCAAGAAAGTTGGATTGAAGAAGGCTGGGGATAATGGGGTGCGTGCAGC TTCTGGAGGCTTCTCATATCTATATGAGCCGTTATGGTGGTTGGGAATGATAACTATGAT TCTAGGCGAGGTAGCCAATTTTGCAGCATATGCATTTGCCCCTGCCGTACTTGTTACTCC TCTAGGAGCTCTAAGCATCATATTTAGTGCAGTGCTCGCACACTTCATTCTGAAAGAAAA TTTGCACATGTTTGGCGTTGTTGGTTGCATACTATGTGTTGTTGGTTCTGTTGGTATAGT TTTGCATGCCCCAAAGGAGAGAAAAATTGATTCTATGAAGGAAATATGGCATCTTGCAAC ACAGCCAGGTTTTATTGTTTATTCATGCGTGGCAGTGGCCTGCGTTCTTTTTTTGATATT TCGGGTTGTTGAGCGCTCTGGGCACAGATTGATGCTTGTTTACATAGCAATCTGTTCATT AATGGGATCTCTTACGGTTATCAGTGTAAAAGCAGTTGCTATTGCTTTAAAGCTATCATT TGGTGGATCAAATCAATTCATCTACGTCCAGACATGGTTCTTCATAGTAGTAGTCACTAT TTGCTGCTTGGTGCAATTAAACTACTTAAACAAGGCTCTGGACTCGTTCAACACGGCTGT GGTTTCTCCTGTATACTACGTGATGTTCACCATTCTTACCATTGTTGCAAACATGATCAT GTACAAGGACTGGGCCTCGCAGACTGCAACGCAGATCGCAACACAGCTATGTGGGTTTGT GACCATTGTCGCGGGGACTTTTCTGCTTCACAAGACTAGGGATATGGGAAATCCACCACC ACCACCACCTGACCAAATGTGCCTGCAAGAAGCCGGGGAATGTGCTCCACGGTCAATGAC CAGTTCTAGCTGAACACACTAAGATGTCAAAATCTCACAGCCTCTATGGACTGAATTGGA ATTTTGAGCTATATGGTGACCTTTGTAGATATATTAGGAAGGAGTAAAGATTGGAGTGCC CAGCAGTTGGACATACCGATGAAGTTTTACGTTTCTGCAAAAGAAAGAATGAACTGTATG AAGGCATCGGAATCTTGTGAAGACATGAGATTCAAACTAGCTACCTAACTTTGGTAAATA GCTTGTTATGCCATTTTAAAACGATCATGATGCTCAAGAGGCAGGGCGAATTAGGCTTCT