Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016521_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:166099075:166106989:1 gene:Zm00001d016521 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROS1
Sequence	ATGGCGGCGGCGGCAGATCTTGAGCCTCAGTTGGGGATATCGCCGGCGACACCCGACATT GTCCGCAAGCTAGCTCGACCGTCCGGGACAACCACCGCAGTTGGCTATTGCTGCACTGCT CTGTACACCAGCACGGCTGCTGGCCCCGGAAAGGTGGACGGCGATGGCCTTGCCTCGGTG CCGTTGCATGCCCATGAACATTCTCAGTCCGCCGCACTGGATAATTTGGTCCAAGTGGAC TGTGATCCCGTGGGCACTCAGGAGTCCAGCACCTTGCCTGCACTGGTGGGCGAGTCCTCT GGCAAGGTTGCACAGCAAGAGCAGCAGCACAAGGAAGGTGTTGATAGTGCCAGAGATGCA GGTGCTGCTTCTCCTGCCCCTACTTCTACTCCGGAGAACATGGAGCCCACACCTCGGAGG AGGGGGAAGAAGTCGACCAAGGGGGTTCAACGTCTCAAAGTGGCCAAAGATAAAGTGATG AAGCTCAAGGTGACCACGCCTAGTACAGTAAAAAAGAAGAAAATGACAGAGGATGATATT CAACATATTGGTGCCCACAGGTCTAATAGTGCAAGACGCAAGTTAGATTTGGATTTACAT TCATCAGAAAGTAAAACATGTTTCAGCAGAGCCGAGCTGATGATTAATTTGAAGTGCATT GGCAAGAGTTATGGTTTAATCAGTGAACTGACTACACATAAGAGGAGCAAGAGAGGGAAA AAAAGGAAAATGATGGTAGGAAACAAGGAAAGTGGTCAGCTAGCACTTTTGCCTTACAAC TGGACTACAACGGTTGCGGTATCACGCCCTCTAACTCATGTAAAGAAATTGCGGGCTAAG GTTTTGGGCCTTACTGATGAAACAATGCGGGTTTGTGCTGTTTTGGCAAATTGGAATGGG AGCGACAATGAAAGTTTTGAAGGTTTTGATATTGGCAATGGACCCGAATGGGATACAACA AGACAAATGTTTGAACAATTTGTGGATATATTCATTAATGCTATGTTTGATCTAATTGGG CCTAGAAAATATTCTCAGTGGGGAGGATCCCTAATTGATTCTGTGGTGGGTACTTTCCTT ACACAGAATTCTGCTGATAATTTATCAAGCCAAGCTTTTATGAATATAGCGGCGAAGTTT CCTAAGAGTGAGAGACACTGTCAAGATAATGCGACTCAATTAATAGATGGTGTCGATAGA AAAATGAAGTCAAAAGAAGCATTTGATAACTTTGACTTGGTTCATTCACATTTTGATGAA TACATTAAATCTGAGGAAGAAGTTGACTTTGATAAAAAGGTGAAAAGTCAATACGGCGAA GACTACAATAGAATTATAGGAAATTTTGCTGCAAGTATGAAGCAGAAAAACATCTCTACT TGGGACAGTGATCTTATGAATTTAGTGAAAGATAAATATGGAAATCCAGTGTGCGACGAG AACAACTTGAGAAAGATCTTAGCTTCACTACGACAACCAGTCACAGCATCTAATTGGAAA GAGTTACAGGAGGAAGCATATAAAAAAGGATACAATAACAAAAGTCAAACTGAAACAAGT GATGTTGTAGATTGGGAATCAGTTCTAAACGCTCCATTTTCTGAGGTTGCAAAATGCATT GCAATCAGGGGACAGCACAACATTTTGGCTGTGCGGATACTGGCTTTTCTCGACCATGTA AAGAAAGCTCAAGATGGAAGCTTTGACCTAGATTGGCTTAGATTTGTATCACGTGAAAAA GCCAAAAAATTTCTGCTTAGTATACATGGGATTGGAGTGAAAAGTGCTGACTGCATTTGC CTTTTGTCATTGAGGCATAGAGCATTTCCAGTTGATGTCAATGTAGCTCGCATAGTGACA AGGCTAGGATGGGTCAAACTTCAGCCCTTAAACGGTGCTGATTTCCACCTAATTGACCTT TATCCGATCTTGGATGATGTACAAAGGTATTTATGGCCTCGATTGTGCACCATTGATAAG GAAAAGTTGTATGAACTGCACTGTCTTATGATAACTTTTGGAAAGGTAGTTTGCAGGAAA AAAAATCCAAACTGCGGAGCTTGTCCTTTCAGTGCAAGTTGTAAATATTACAATAGTTCA CTTGCCAAAAAGTCGCTACCTCTTCCAGAGAAGCATGAACAAGGAGAACAGCAAACAAGC ATGGTTGCTTATGGGAGTTGCACACCAAGTTCTCAACAAATGTATCGGTATCAAATTGCA ATAAGCAGCACTACTACTGAAACACCACCCATCCATAGCTGCGAGCCAATTGTTGAGATG CCACCAAGCCCAGAATATGAATACAATGAAACACCTAATGAGCAAGAAGATTTCTACGAA GATTATGCATGTGATATTGAAGATTTTGCACCAGGAGTACAATATGATTCTGAAATAAAT ATTTGTTCAAACAAGCATACGCTGAACAATAATTCTTGGACACCGAACTGTGGGAAGGAC TTGGCTGTGATCAATCCAAAGTGTAGCTTTGGCCAAAGTAAAAAACTAAAAAATACCGGT CGTCTTAGGACAGAACACAATGCATACGTCCTCCCAGATGGTCATGTAATCCTAGAAGAG TTCGAAGACAGAGTTCCGGGAGATAGATGTCCTTACCTACTAGTGGTTATTTCATGTCCT GATGACTACAAAGTTAAAGGCACGGTTCTGATACCGTGTCGGACAGCAAATAGAGGAAAG TTTCCACTGAATGGTACCTACTTCCAGGAAAATGAGGTTTTTGCAGATTACTCATCTAGC CGAAACCCAATAACTGTACCTAGGGAATGTATTGGGATGCTGGAGAGAAGCATTGTATAC TTTGGTTCATCTATACACTCGATCACAAAAGGTCAAACAAGGCAAGATATACAGGAATGC TTGAAGGAAGGTATCAAGATATATCTGTGTACGGTCGTTCCACCGGAAGACCAGAATACC ACTACGCCTATGTAG

Peptide Sequence

PEP ID	Zm00001d016521_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:166099075:166106989:1 gene:Zm00001d016521 transcript:Zm00001d016521_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROS1
Sequence	MAAAADLEPQLGISPATPDIVRKLARPSGTTTAVGYCCTALYTSTAAGPGKVDGDGLASV PLHAHEHSQSAALDNLVQVDCDPVGTQESSTLPALVGESSGKVAQQEQQHKEGVDSARDA GAASPAPTSTPENMEPTPRRRGKKSTKGVQRLKVAKDKVMKLKVTTPSTVKKKKMTEDDI QHIGAHRSNSARRKLDLDLHSSESKTCFSRAELMINLKCIGKSYGLISELTTHKRSKRGK KRKMMVGNKESGQLALLPYNWTTTVAVSRPLTHVKKLRAKVLGLTDETMRVCAVLANWNG SDNESFEGFDIGNGPEWDTTRQMFEQFVDIFINAMFDLIGPRKYSQWGGSLIDSVVGTFL TQNSADNLSSQAFMNIAAKFPKSERHCQDNATQLIDGVDRKMKSKEAFDNFDLVHSHFDE YIKSEEEVDFDKKVKSQYGEDYNRIIGNFAASMKQKNISTWDSDLMNLVKDKYGNPVCDE NNLRKILASLRQPVTASNWKELQEEAYKKGYNNKSQTETSDVVDWESVLNAPFSEVAKCI AIRGQHNILAVRILAFLDHVKKAQDGSFDLDWLRFVSREKAKKFLLSIHGIGVKSADCIC LLSLRHRAFPVDVNVARIVTRLGWVKLQPLNGADFHLIDLYPILDDVQRYLWPRLCTIDK EKLYELHCLMITFGKVVCRKKNPNCGACPFSASCKYYNSSLAKKSLPLPEKHEQGEQQTS MVAYGSCTPSSQQMYRYQIAISSTTTETPPIHSCEPIVEMPPSPEYEYNETPNEQEDFYE DYACDIEDFAPGVQYDSEINICSNKHTLNNNSWTPNCGKDLAVINPKCSFGQSKKLKNTG RLRTEHNAYVLPDGHVILEEFEDRVPGDRCPYLLVVISCPDDYKVKGTVLIPCRTANRGK FPLNGTYFQENEVFADYSSSRNPITVPRECIGMLERSIVYFGSSIHSITKGQTRQDIQEC LKEGIKIYLCTVVPPEDQNTTTPM

Transcript Sequence

Transcript ID	Zm00001d016521_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:166099075:166106989:1 gene:Zm00001d016521 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROS1
Sequence	ACACAATCCAGAGCGAGGTCGTGGCGTGGACTCCAAATCCTTCCTCTTCAGGACTCAACA GCGGAGTTCGCTCCGACCACGGGCCCTGCTGCCATGGCGGCGGCGGCAGATCTTGAGCCT CAGTTGGGGATATCGCCGGCGACACCCGACATTGTCCGCAAGCTAGCTCGACCGTCCGGG ACAACCACCGCAGTTGGCTATTGCTGCACTGCTCTGTACACCAGCACGGCTGCTGGCCCC GGAAAGGTGGACGGCGATGGCCTTGCCTCGGTGCCGTTGCATGCCCATGAACATTCTCAG TCCGCCGCACTGGATAATTTGGTCCAAGTGGACTGTGATCCCGTGGGCACTCAGGAGTCC AGCACCTTGCCTGCACTGGTGGGCGAGTCCTCTGGCAAGGTTGCACAGCAAGAGCAGCAG CACAAGGAAGGTGTTGATAGTGCCAGAGATGCAGGTGCTGCTTCTCCTGCCCCTACTTCT ACTCCGGAGAACATGGAGCCCACACCTCGGAGGAGGGGGAAGAAGTCGACCAAGGGGGTT CAACGTCTCAAAGTGGCCAAAGATAAAGTGATGAAGCTCAAGGTGACCACGCCTAGTACA GTAAAAAAGAAGAAAATGACAGAGGATGATATTCAACATATTGGTGCCCACAGGTCTAAT AGTGCAAGACGCAAGTTAGATTTGGATTTACATTCATCAGAAAGTAAAACATGTTTCAGC AGAGCCGAGCTGATGATTAATTTGAAGTGCATTGGCAAGAGTTATGGTTTAATCAGTGAA CTGACTACACATAAGAGGAGCAAGAGAGGGAAAAAAAGGAAAATGATGGTAGGAAACAAG GAAAGTGGTCAGCTAGCACTTTTGCCTTACAACTGGACTACAACGGTTGCGGTATCACGC CCTCTAACTCATGTAAAGAAATTGCGGGCTAAGGTTTTGGGCCTTACTGATGAAACAATG CGGGTTTGTGCTGTTTTGGCAAATTGGAATGGGAGCGACAATGAAAGTTTTGAAGGTTTT GATATTGGCAATGGACCCGAATGGGATACAACAAGACAAATGTTTGAACAATTTGTGGAT ATATTCATTAATGCTATGTTTGATCTAATTGGGCCTAGAAAATATTCTCAGTGGGGAGGA TCCCTAATTGATTCTGTGGTGGGTACTTTCCTTACACAGAATTCTGCTGATAATTTATCA AGCCAAGCTTTTATGAATATAGCGGCGAAGTTTCCTAAGAGTGAGAGACACTGTCAAGAT AATGCGACTCAATTAATAGATGGTGTCGATAGAAAAATGAAGTCAAAAGAAGCATTTGAT AACTTTGACTTGGTTCATTCACATTTTGATGAATACATTAAATCTGAGGAAGAAGTTGAC TTTGATAAAAAGGTGAAAAGTCAATACGGCGAAGACTACAATAGAATTATAGGAAATTTT GCTGCAAGTATGAAGCAGAAAAACATCTCTACTTGGGACAGTGATCTTATGAATTTAGTG AAAGATAAATATGGAAATCCAGTGTGCGACGAGAACAACTTGAGAAAGATCTTAGCTTCA CTACGACAACCAGTCACAGCATCTAATTGGAAAGAGTTACAGGAGGAAGCATATAAAAAA GGATACAATAACAAAAGTCAAACTGAAACAAGTGATGTTGTAGATTGGGAATCAGTTCTA AACGCTCCATTTTCTGAGGTTGCAAAATGCATTGCAATCAGGGGACAGCACAACATTTTG GCTGTGCGGATACTGGCTTTTCTCGACCATGTAAAGAAAGCTCAAGATGGAAGCTTTGAC CTAGATTGGCTTAGATTTGTATCACGTGAAAAAGCCAAAAAATTTCTGCTTAGTATACAT GGGATTGGAGTGAAAAGTGCTGACTGCATTTGCCTTTTGTCATTGAGGCATAGAGCATTT CCAGTTGATGTCAATGTAGCTCGCATAGTGACAAGGCTAGGATGGGTCAAACTTCAGCCC TTAAACGGTGCTGATTTCCACCTAATTGACCTTTATCCGATCTTGGATGATGTACAAAGG TATTTATGGCCTCGATTGTGCACCATTGATAAGGAAAAGTTGTATGAACTGCACTGTCTT ATGATAACTTTTGGAAAGGTAGTTTGCAGGAAAAAAAATCCAAACTGCGGAGCTTGTCCT TTCAGTGCAAGTTGTAAATATTACAATAGTTCACTTGCCAAAAAGTCGCTACCTCTTCCA GAGAAGCATGAACAAGGAGAACAGCAAACAAGCATGGTTGCTTATGGGAGTTGCACACCA AGTTCTCAACAAATGTATCGGTATCAAATTGCAATAAGCAGCACTACTACTGAAACACCA CCCATCCATAGCTGCGAGCCAATTGTTGAGATGCCACCAAGCCCAGAATATGAATACAAT GAAACACCTAATGAGCAAGAAGATTTCTACGAAGATTATGCATGTGATATTGAAGATTTT GCACCAGGAGTACAATATGATTCTGAAATAAATATTTGTTCAAACAAGCATACGCTGAAC AATAATTCTTGGACACCGAACTGTGGGAAGGACTTGGCTGTGATCAATCCAAAGTGTAGC TTTGGCCAAAGTAAAAAACTAAAAAATACCGGTCGTCTTAGGACAGAACACAATGCATAC GTCCTCCCAGATGGTCATGTAATCCTAGAAGAGTTCGAAGACAGAGTTCCGGGAGATAGA TGTCCTTACCTACTAGTGGTTATTTCATGTCCTGATGACTACAAAGTTAAAGGCACGGTT CTGATACCGTGTCGGACAGCAAATAGAGGAAAGTTTCCACTGAATGGTACCTACTTCCAG GAAAATGAGGTTTTTGCAGATTACTCATCTAGCCGAAACCCAATAACTGTACCTAGGGAA TGTATTGGGATGCTGGAGAGAAGCATTGTATACTTTGGTTCATCTATACACTCGATCACA AAAGGTCAAACAAGGCAAGATATACAGGAATGCTTGAAGGAAGGTATCAAGATATATCTG TGTACGGTCGTTCCACCGGAAGACCAGAATACCACTACGCCTATGTAGCACACTACATGC TACCAACACCAAACCTGCTCGTGAGAAGCCTATGAAGCGGACTAGGACATCGCCGGAGGG GAAGAAGAACGGGACATCGCCGGAGGGGAAGAAGAACGAGAGCCTCTTCTGATGCTTGAC TTCGTGTACAAGTTGTAGCTGAATGTTCCTCAAAATATAGGATTAACTAGTTCTGTAACA CTAACACCCCGGCTTGGTTATGACTTAGAAACTGTTAGGCCATGTTTGGTTCACATCTCC TAAAGTTTAGTCACTTGTTTAAAAATGTTAAAGGAGGTAACTAAAAAAAACCTCTTAAAT AGGACATTATAGGGACTAATGTTTAGTTCCTAAAATTTAGGAGATGACTAAAGGAACCAA ACATAGTT