Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016520_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:165944432:165950570:1 gene:Zm00001d016520 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 29 description:Heat stress transcription factor A-5
Sequence	ATGGTGACAAATCCAAGCCCACGCGGCCGAGGAGACTCCCCCCTCCACTTGGGAGTTGGG ATCCACCAACCTTCACCCACTCGCAGCAGGCAGCAGGCGGCAGCAGCAGCACGCGCTGCC GCAGCACCAGTCATGGAGGTCGCCGGCGCCCGCGAGCCCGGTAGCGGAGGAGGAGGAGGT GGCGGCGGTGGCGGACCAGCCCCGTTCCTGCTGAAGACGTACGAGATGGTGGACGACCCG TCGAGCGACGCGGTGGTGTCATGGAGCGACGCATCCGACGGGAGCTTCGTCGTCTGGAAC CAGCCCGAGTTCGCCGCGCGGATGCTGCCTACCTACTTCAAGCACAACAACTTCTCCAGC TTCATCCGCCAGCTCAACACATACGGTTTTCGCAAAATAGACCCAGAGCGCTGGGAATTT GCTAATGAGTACTTTGTCAAGGGACAGAAGCACCTGCTGAAGAATATCCACAGGAGGAAA CCCATCCACAGCCATAGCCATCAGCCAGGTGCCCTGCCTGACAATGAGCGTGCGTTATTT GAGGATGAGATTGACAGGCTTTCACGAGAGAAAGCTGCCCTCCAGGCTGACCTCTGGAAA TTCAATCAGCAGCAGTCAGGTGCTGTGAACCAGTTAGAAGATCTTGAGCGGCGAGTGCTT GACATGGAGCAGCGACAGACGAAGATGCTCAGCTTCTTGCAGCAGGCTAGGAAGAATCCT CAGTTTGTCAGGAAGCTCGTTAAGATGGCAGAGGAATCCCCAATCTTTGCGGACGCGTTT CACAAGAAGCGAAGGCTACCTGGGCTTGAATGCATCACGGATGCTACCGAAACTGCCACT AGCTTTTTCGATGACCATAGCAGTAGTTCCAGGCAAGAAATGGGTAACCTTCTGAATCAG CACTTCTCTGACAAGCTGAAGCTTGGACTCTGTCCTGCAATGGCGGAAAGCAACCTCATC ACCCTGAGCACCCAAAGCTCACATGAAGATAACGGGAGCCCTCTTGGGAAGCATCCAGAT TACGAGAGAACAGGCATGGAGTGCCTTCCACTGGTGCCACAGATGATGGAGCTCTCTGAC ACTGGAACATCCATCTGTCCCTCGAAGAGTGTGAGCTTTACAACAGCTGCAAATGACGAC GGGTTCTTGCCATGCCACCTCAACCTCAGCCTTGCATCATGTCCAATGGATGTGGTCAGA AGCCAAATCCCCGATGCAAACGTGAACACTGTGGATGAGAAGGATGGCCCACCGGAGGTG ACCACACCCACCATGGAGAAGGACGACGGCATGCCTGACAGATGCCATGATGCTACCCAG AACCAGAAGGAGGCTTCAGGTCACGCTGGGGCCGCAGCAGATGCAACGGGTAGGCCGCAT CGGGGCAGCCAAGCTCCCCCTGAAGAACATACAGGTCCCCAGGTGGTGGTGAACGACAAG TTCTGGGAGCAGTTCCTTACCGAGAGGCCGGGCTGCCCCGAAGCCGAGGAAGCAAGCTTC ACCCTGAGGAGGGATCCAGACCACACGCATGCGTACGACGAGGGCACTGGAAGTGACACG AGAGATATGGGGCAGCTGAAACTCTGA

Peptide Sequence

PEP ID	Zm00001d016520_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:165944432:165950570:1 gene:Zm00001d016520 transcript:Zm00001d016520_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 29 description:Heat stress transcription factor A-5
Sequence	MVTNPSPRGRGDSPLHLGVGIHQPSPTRSRQQAAAAARAAAAPVMEVAGAREPGSGGGGG GGGGGPAPFLLKTYEMVDDPSSDAVVSWSDASDGSFVVWNQPEFAARMLPTYFKHNNFSS FIRQLNTYGFRKIDPERWEFANEYFVKGQKHLLKNIHRRKPIHSHSHQPGALPDNERALF EDEIDRLSREKAALQADLWKFNQQQSGAVNQLEDLERRVLDMEQRQTKMLSFLQQARKNP QFVRKLVKMAEESPIFADAFHKKRRLPGLECITDATETATSFFDDHSSSSRQEMGNLLNQ HFSDKLKLGLCPAMAESNLITLSTQSSHEDNGSPLGKHPDYERTGMECLPLVPQMMELSD TGTSICPSKSVSFTTAANDDGFLPCHLNLSLASCPMDVVRSQIPDANVNTVDEKDGPPEV TTPTMEKDDGMPDRCHDATQNQKEASGHAGAAADATGRPHRGSQAPPEEHTGPQVVVNDK FWEQFLTERPGCPEAEEASFTLRRDPDHTHAYDEGTGSDTRDMGQLKL

Transcript Sequence

Transcript ID	Zm00001d016520_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:165944432:165950570:1 gene:Zm00001d016520 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 29 description:Heat stress transcription factor A-5
Sequence	ATGGTGACAAATCCAAGCCCACGCGGCCGAGGAGACTCCCCCCTCCACTTGGGAGTTGGG ATCCACCAACCTTCACCCACTCGCAGCAGGCAGCAGGCGGCAGCAGCAGCACGCGCTGCC GCAGCACCAGTCATGGAGGTCGCCGGCGCCCGCGAGCCCGGTAGCGGAGGAGGAGGAGGT GGCGGCGGTGGCGGACCAGCCCCGTTCCTGCTGAAGACGTACGAGATGGTGGACGACCCG TCGAGCGACGCGGTGGTGTCATGGAGCGACGCATCCGACGGGAGCTTCGTCGTCTGGAAC CAGCCCGAGTTCGCCGCGCGGATGCTGCCTACCTACTTCAAGCACAACAACTTCTCCAGC TTCATCCGCCAGCTCAACACATACGGTTTTCGCAAAATAGACCCAGAGCGCTGGGAATTT GCTAATGAGTACTTTGTCAAGGGACAGAAGCACCTGCTGAAGAATATCCACAGGAGGAAA CCCATCCACAGCCATAGCCATCAGCCAGGTGCCCTGCCTGACAATGAGCGTGCGTTATTT GAGGATGAGATTGACAGGCTTTCACGAGAGAAAGCTGCCCTCCAGGCTGACCTCTGGAAA TTCAATCAGCAGCAGTCAGGTGCTGTGAACCAGTTAGAAGATCTTGAGCGGCGAGTGCTT GACATGGAGCAGCGACAGACGAAGATGCTCAGCTTCTTGCAGCAGGCTAGGAAGAATCCT CAGTTTGTCAGGAAGCTCGTTAAGATGGCAGAGGAATCCCCAATCTTTGCGGACGCGTTT CACAAGAAGCGAAGGCTACCTGGGCTTGAATGCATCACGGATGCTACCGAAACTGCCACT AGCTTTTTCGATGACCATAGCAGTAGTTCCAGGCAAGAAATGGGTAACCTTCTGAATCAG CACTTCTCTGACAAGCTGAAGCTTGGACTCTGTCCTGCAATGGCGGAAAGCAACCTCATC ACCCTGAGCACCCAAAGCTCACATGAAGATAACGGGAGCCCTCTTGGGAAGCATCCAGAT TACGAGAGAACAGGCATGGAGTGCCTTCCACTGGTGCCACAGATGATGGAGCTCTCTGAC ACTGGAACATCCATCTGTCCCTCGAAGAGTGTGAGCTTTACAACAGCTGCAAATGACGAC GGGTTCTTGCCATGCCACCTCAACCTCAGCCTTGCATCATGTCCAATGGATGTGGTCAGA AGCCAAATCCCCGATGCAAACGTGAACACTGTGGATGAGAAGGATGGCCCACCGGAGGTG ACCACACCCACCATGGAGAAGGACGACGGCATGCCTGACAGATGCCATGATGCTACCCAG AACCAGAAGGAGGCTTCAGGTCACGCTGGGGCCGCAGCAGATGCAACGGGTAGGCCGCAT CGGGGCAGCCAAGCTCCCCCTGAAGAACATACAGGTCCCCAGGTGGTGGTGAACGACAAG TTCTGGGAGCAGTTCCTTACCGAGAGGCCGGGCTGCCCCGAAGCCGAGGAAGCAAGCTTC ACCCTGAGGAGGGATCCAGACCACACGCATGCGTACGACGAGGGCACTGGAAGTGACACG AGAGATATGGGGCAGCTGAAACTCTGACCTTGAGTTTTTCTAGCATGACCTTGAGTTTTT GCTGGAAATTGGAATGGCACGAAGGTCTGTCTAGGATTGTGTGTAAACAGCATCGCAAGA ATGCCCTGTACATATTATCCCAGTATACATACCGGAGACAGAGCAATGCGACTACGGAAT TGCTGTTCTGTTGTGGTTAATATGTATATGGTTATACTTCGTTACAGCAAAGCGACCAGT TTACGCAAGCCGCGTTGACAGAATTCGATGTAACAAAGAAAATTCCTTAAAATTCTAGGA AGAGGTGTATAAAGTATCTTATTTTTTTTAACTGATGGAGGTAAATCCTAGAAAGCAAGA