Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016505_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:165226704:165228471:-1 gene:Zm00001d016505 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box protein

Sequence

ATGGTGAGTCTGTGTCTGCAGGCGAAGAGGCCTCGGGTGGGGGCGGCGCCACGGGTTGTG
GCGAACCAGATGGGGGCGTTCGAGGTGCTGCCCCAGGAGCTGATCCTCTCCGTGCTCACC
GCCCTGTCGTCGGCCGCGGACAAGCCCGCCGACCTCTTCAACGTCATGCTTGTGTGCCAG
GAGTTCTGCAGGCTGGTGACTAACCCGCAGGTGATCCGGGCGGCGTCGGCGGCGTGCGTG
TCCGTGCTCCCGCGCAGGTGGTGCGCAGCCGCCGACCGTTTCCTCCGCTTCTGCGGCGAC
AACGGCAACGCGGACGCCAACTTTTTCCTCGGCATGATCCAGTTCTACTGCTTGGGGCTC
CAGACCCATGGGTGGTCCCGCATGCTGATGGCGGTGCGGTCGGGCCACGCGCACGCCGCC
TTCGCCGCGGCCGTCGTCTACTACAACGGCAGCTGCATCGACCACAACCAGAGGCAGCCG
CTGGCGGCCGCGAACCTGTTCGCGCTGGCGGCGTGCCGCGGCCACATGGGCGCGCTGCGC
GACCTGGCCTTCTGCGTCAGCAACGGGCTGGGCGTGCGGCAGGACGCCGAGGCCGGCCGC
CGCCTCACCTTCACGGCCAACCTGCGGGAGTTCCGCGCCACGTACCCGACCGCGGCGGAG
CAGGCGGTGGCGTACGCCCACGTGGTCGGCAACCCCGGGTGCCTCACCAGCGAGCTCGGC
TGCTTCACCACCGTGCCGGCCAGCCTGCGGGGGTGGGCGCACCCGGCCAACCGGTTCCTG
TGCGACTGGTTCTCGGCGAACCCGCTGCCGTTCCCGCCGCGGCGCCTGCTGCTCATGTGC
TCCATGCCCACCTGCGGCCGCCCGGAGACGCGGGGCCTCGAGTACCGCCGCTGCCCCGTC
TGCGGCATCGCGCGCTACTGCTCCCGCTCCTGCCAGTCGCTGCACTGGAGGATGGGCCAC
ACGCGGGAGTGCGTCCCCACGCACCAGTGGCTCATGGAAGCCATTGCCAACCACGCCGTC
GTCAATGCCGACGACGGCGCCAATGCTGCTGCTATGCCCGCTGTCAACAATAATAGCGCC
ACTCACCACAACAATCTCGGTGGTGCTGCTGCTGATGCTCCTGCTCCTAAGTAG

Peptide Sequence

PEP ID

Zm00001d016505_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:165226704:165228471:-1 gene:Zm00001d016505 transcript:Zm00001d016505_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box protein

Sequence

MVSLCLQAKRPRVGAAPRVVANQMGAFEVLPQELILSVLTALSSAADKPADLFNVMLVCQ
EFCRLVTNPQVIRAASAACVSVLPRRWCAAADRFLRFCGDNGNADANFFLGMIQFYCLGL
QTHGWSRMLMAVRSGHAHAAFAAAVVYYNGSCIDHNQRQPLAAANLFALAACRGHMGALR
DLAFCVSNGLGVRQDAEAGRRLTFTANLREFRATYPTAAEQAVAYAHVVGNPGCLTSELG
CFTTVPASLRGWAHPANRFLCDWFSANPLPFPPRRLLLMCSMPTCGRPETRGLEYRRCPV
CGIARYCSRSCQSLHWRMGHTRECVPTHQWLMEAIANHAVVNADDGANAAAMPAVNNNSA
THHNNLGGAAADAPAPK

Transcript Sequence

Transcript ID

Zm00001d016505_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:165226704:165228471:-1 gene:Zm00001d016505 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box protein

Sequence

AACTATCTCCATCTTCTCTCTTCACTCCGAGGATCGGAGTGAAAGGAGCACTAGCTACTG
GCAGTATGGTGAGTCTGTGTCTGCAGGCGAAGAGGCCTCGGGTGGGGGCGGCGCCACGGG
TTGTGGCGAACCAGATGGGGGCGTTCGAGGTGCTGCCCCAGGAGCTGATCCTCTCCGTGC
TCACCGCCCTGTCGTCGGCCGCGGACAAGCCCGCCGACCTCTTCAACGTCATGCTTGTGT
GCCAGGAGTTCTGCAGGCTGGTGACTAACCCGCAGGTGATCCGGGCGGCGTCGGCGGCGT
GCGTGTCCGTGCTCCCGCGCAGGTGGTGCGCAGCCGCCGACCGTTTCCTCCGCTTCTGCG
GCGACAACGGCAACGCGGACGCCAACTTTTTCCTCGGCATGATCCAGTTCTACTGCTTGG
GGCTCCAGACCCATGGGTGGTCCCGCATGCTGATGGCGGTGCGGTCGGGCCACGCGCACG
CCGCCTTCGCCGCGGCCGTCGTCTACTACAACGGCAGCTGCATCGACCACAACCAGAGGC
AGCCGCTGGCGGCCGCGAACCTGTTCGCGCTGGCGGCGTGCCGCGGCCACATGGGCGCGC
TGCGCGACCTGGCCTTCTGCGTCAGCAACGGGCTGGGCGTGCGGCAGGACGCCGAGGCCG
GCCGCCGCCTCACCTTCACGGCCAACCTGCGGGAGTTCCGCGCCACGTACCCGACCGCGG
CGGAGCAGGCGGTGGCGTACGCCCACGTGGTCGGCAACCCCGGGTGCCTCACCAGCGAGC
TCGGCTGCTTCACCACCGTGCCGGCCAGCCTGCGGGGGTGGGCGCACCCGGCCAACCGGT
TCCTGTGCGACTGGTTCTCGGCGAACCCGCTGCCGTTCCCGCCGCGGCGCCTGCTGCTCA
TGTGCTCCATGCCCACCTGCGGCCGCCCGGAGACGCGGGGCCTCGAGTACCGCCGCTGCC
CCGTCTGCGGCATCGCGCGCTACTGCTCCCGCTCCTGCCAGTCGCTGCACTGGAGGATGG
GCCACACGCGGGAGTGCGTCCCCACGCACCAGTGGCTCATGGAAGCCATTGCCAACCACG
CCGTCGTCAATGCCGACGACGGCGCCAATGCTGCTGCTATGCCCGCTGTCAACAATAATA
GCGCCACTCACCACAACAATCTCGGTGGTGCTGCTGCTGATGCTCCTGCTCCTAAGTAGA
CATGCGTCGACGAGCCGGCCCGCTAGCTATTCACCAGCGCTAGCTACTACACCTCTCCTA
TCCTATGTTCTCAGTTAACTTTCTGTCAGACAGTAGTTTTGTTTTCCTTCGTGTAATCGC
CTAGATATATATATTTCCATTTCTAAAATATATACCTGTGAGTTTTCTATATA