Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016477_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:163946822:163951276:-1 gene:Zm00001d016477 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence	ATGGCACCGGCGCCCCGCGCTTCCAGCTTCTTCTCGGTGCTCCTCGTCCTCCTCTTTGCG CTGTCGGTGGGGTGCGCGTCCGCCACCGGCGTCTTCCAGGTGCGCCGCAAGTTCCCGCGC CACGGAGGACGGGGTGTGGCGGAGCACCTCGCGGCGCTGCGGAGGCATGACGCCAACCGC CACGGCCGGCTCCTTGGCGCCGTCGACTTGGCCCTCGGCGGCGTCGGGCTCCCCACAGAT ACCGGCCTGTACTACACCCGGATCGAGATCGGCTCGCCGCCCAAGGGCTACTACGTGCAG GTGGACACCGGCAGCGATATCCTCTGGGTCAACTGCATCCGCTGCGATGGCTGCCCCACC AGAAGCGGACTTGGGATAGAGCTGACGCAGTACGATCCGGCTGGGAGCGGGACCACGGTG GGGTGCGAGCAGGAGTTCTGCGTTGCCAACAGCGCGGGCGGCGTGCCCCCCACGTGCCCC TCGACGTCGTCGCCGTGCCAGTTCAGGATCACCTACGGAGATGGGAGCACAACCACCGGC TTCTACGTCACAGACTTCGTGCAGTACAACCAGGTGTCCGGCAACGGCCAGACCACCACG TCCAATGCCAGCATCACCTTTGGGTGTGGTGCTCAGCTTGGTGGGGATTTGGGATCCTCG AACCAGGCCCTTGATGGGATTCTTGGGTTCGGCCAGTCGGATTCGTCGATGCTATCGCAG TTGGCTGCTGCTCGTAGAGTGAGGAAGATTTTTGCTCACTGCTTGGACACTGTGCGTGGT GGTGGCATCTTCGCTATCGGGAATGTGGTACAGCCCAAAGTAAAGACGACGCCGTTGGTG CCCAACGTGACACACTACAATGTCAATCTGCAAGGAATTTCTGTTGGTGGTGCTACACTT CAGCTTCCAACAAGTACTTTTGATTCTGGTGACAGTAAAGGCACTATCATTGACAGTGGG ACAACACTGGCATATCTTCCGAGGGAAGTTTATAGGACTTTGTTGGCTGCGGTCTTTGAT AAGTACCAAGATTTGCCCTTACATAATTATCAAGACTTCGTGTGTTTTCAATTTTCTGGA AGGGATCATCTCATGCATGGACTTCTTTGTTTGACAAATTATTGTTTGTGTATATTTCTA ACTCCATCCCATTCTTTTTGCAGTATAGATGATGGATTTCCCGTAATCACCTTTAGTTTT GAGGGAGACCTTACACTGAATGTTTACCCAGATGATTACCTTTTCCAGAACAGGAATGAT TTATACTGTATGGGATTCCTGGATGGTGGTGTACAGACTAAAGATGGGAAAGATATGCTC CTCTTAGGAGACCTGGTCCTCTCAAACAAACTAGTAGTTTATGACTTGGAAAAAGAAGTT ATTGGATGGACAGACTACAACTGCTCCTCGAGCATTAAAATTGAGGATGACAAGACTGGC TCAGTGTACACTGTCGACGCACAAAACATCTCCGCTGGGTGGAGATTTCAATGGCACAAC TCCTTAATTCTGTTGATATTAATAAGGACAATCTGGAGCTGTTTGGTTATAGCCTAA

Peptide Sequence

PEP ID	Zm00001d016477_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:163946822:163951276:-1 gene:Zm00001d016477 transcript:Zm00001d016477_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence	MAPAPRASSFFSVLLVLLFALSVGCASATGVFQVRRKFPRHGGRGVAEHLAALRRHDANR HGRLLGAVDLALGGVGLPTDTGLYYTRIEIGSPPKGYYVQVDTGSDILWVNCIRCDGCPT RSGLGIELTQYDPAGSGTTVGCEQEFCVANSAGGVPPTCPSTSSPCQFRITYGDGSTTTG FYVTDFVQYNQVSGNGQTTTSNASITFGCGAQLGGDLGSSNQALDGILGFGQSDSSMLSQ LAAARRVRKIFAHCLDTVRGGGIFAIGNVVQPKVKTTPLVPNVTHYNVNLQGISVGGATL QLPTSTFDSGDSKGTIIDSGTTLAYLPREVYRTLLAAVFDKYQDLPLHNYQDFVCFQFSG RDHLMHGLLCLTNYCLCIFLTPSHSFCSIDDGFPVITFSFEGDLTLNVYPDDYLFQNRND LYCMGFLDGGVQTKDGKDMLLLGDLVLSNKLVVYDLEKEVIGWTDYNCSSSIKIEDDKTG SVYTVDAQNISAGWRFQWHNSLILLILIRTIWSCLVIA

Transcript Sequence

Transcript ID	Zm00001d016477_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:163946822:163951276:-1 gene:Zm00001d016477 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence	AATTTTCACTTGGCCTCCTCATCTTTTCCTCCTTTTCGGCCGGCGTCATCGCCGAACGCG GATACACCGATACACATACCCCGGCTAGCTGTCTGGACTCTGGAGTGTCCTCCGGGCTAA GCAAACCCATAGCCCGATCAGATCGATGGCACCGGCGCCCCGCGCTTCCAGCTTCTTCTC GGTGCTCCTCGTCCTCCTCTTTGCGCTGTCGGTGGGGTGCGCGTCCGCCACCGGCGTCTT CCAGGTGCGCCGCAAGTTCCCGCGCCACGGAGGACGGGGTGTGGCGGAGCACCTCGCGGC GCTGCGGAGGCATGACGCCAACCGCCACGGCCGGCTCCTTGGCGCCGTCGACTTGGCCCT CGGCGGCGTCGGGCTCCCCACAGATACCGGCCTGTACTACACCCGGATCGAGATCGGCTC GCCGCCCAAGGGCTACTACGTGCAGGTGGACACCGGCAGCGATATCCTCTGGGTCAACTG CATCCGCTGCGATGGCTGCCCCACCAGAAGCGGACTTGGGATAGAGCTGACGCAGTACGA TCCGGCTGGGAGCGGGACCACGGTGGGGTGCGAGCAGGAGTTCTGCGTTGCCAACAGCGC GGGCGGCGTGCCCCCCACGTGCCCCTCGACGTCGTCGCCGTGCCAGTTCAGGATCACCTA CGGAGATGGGAGCACAACCACCGGCTTCTACGTCACAGACTTCGTGCAGTACAACCAGGT GTCCGGCAACGGCCAGACCACCACGTCCAATGCCAGCATCACCTTTGGGTGTGGTGCTCA GCTTGGTGGGGATTTGGGATCCTCGAACCAGGCCCTTGATGGGATTCTTGGGTTCGGCCA GTCGGATTCGTCGATGCTATCGCAGTTGGCTGCTGCTCGTAGAGTGAGGAAGATTTTTGC TCACTGCTTGGACACTGTGCGTGGTGGTGGCATCTTCGCTATCGGGAATGTGGTACAGCC CAAAGTAAAGACGACGCCGTTGGTGCCCAACGTGACACACTACAATGTCAATCTGCAAGG AATTTCTGTTGGTGGTGCTACACTTCAGCTTCCAACAAGTACTTTTGATTCTGGTGACAG TAAAGGCACTATCATTGACAGTGGGACAACACTGGCATATCTTCCGAGGGAAGTTTATAG GACTTTGTTGGCTGCGGTCTTTGATAAGTACCAAGATTTGCCCTTACATAATTATCAAGA CTTCGTGTGTTTTCAATTTTCTGGAAGGGATCATCTCATGCATGGACTTCTTTGTTTGAC AAATTATTGTTTGTGTATATTTCTAACTCCATCCCATTCTTTTTGCAGTATAGATGATGG ATTTCCCGTAATCACCTTTAGTTTTGAGGGAGACCTTACACTGAATGTTTACCCAGATGA TTACCTTTTCCAGAACAGGAATGATTTATACTGTATGGGATTCCTGGATGGTGGTGTACA GACTAAAGATGGGAAAGATATGCTCCTCTTAGGAGACCTGGTCCTCTCAAACAAACTAGT AGTTTATGACTTGGAAAAAGAAGTTATTGGATGGACAGACTACAACTGCTCCTCGAGCAT TAAAATTGAGGATGACAAGACTGGCTCAGTGTACACTGTCGACGCACAAAACATCTCCGC TGGGTGGAGATTTCAATGGCACAACTCCTTAATTCTGTTGATATTAATAAGGACAATCTG GAGCTGTTTGGTTATAGCCTAACGCTGGATATGGTAAACAAACAAGGCCTAAAACATATT TTCTGTAACAAAAAATAGTTGAGTTCAGAAGTTCAACAAAGAGTACAGAATATTATATAG AT