Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016474_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:163737281:163742365:-1 gene:Zm00001d016474 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 74
Sequence	ATGGTGGAGGCCGCCGCCGGGCGCCGGACAGGCACCAGCCGTCGGCGGCCTAGCGGCAGC GGAGGGGAGCACCGGCACCTGGTCGCGCTCGCCGTCGCCGCGCGCGTCGCCATGGTCACC ACCCGGTCCGTGGGTCCAGCAGCAGTAGCGGAAGGTGATGGAGCGGGAGCTGCTGTAACA GATGCCGGCGCCGCTGGCGGTGGCGGACGATGCATGGAGGACTTCTTCGACTGCCTCCTC GGCTTGCTCGGCGCGTTAGGCATGACATGGGCTGCGGCGCGGCCCCAGCGGCAGCCGCGC CCGCCGCTGCCTCGCGGGGCTGCGGGGGCGGGGCCTGCGCCAACTGACTCCCGGCGTTTC GCGGCGGAGCTCAGGGCCACCCCCGGCCGGATCGCCGGCAATGGCGCCTGCGCCGTCGCG TCACTGTACACGCTGCAGGGCAAGAAGGGCGTCAACCAGGATGCTATGATCTTCTGGGAG AACTTCTGTTCAAGAGATGATACCATCTTTTGTGGTGTGTTTGACGGCCATGGACCTTAT GGCCATTTGGTTGCCAAGAGAGTAAGAGATCTGCTGCCTCTAAAGTTAGGAGAAGGTTTG ACGACGGAAGATGGTAGAGTAACATCCACTGGCAACATTAAGCTCAACACACATGATGTA GCTTCACCAGAACACATAGACAAAGGAAGTACTGCCATTTCCTCTGAAGCTCAGCAGAAT GGAGAGTATCCAGAGACCTTCCCAGCATTGAGAACTTCATTCTTGAAGGCATTCCGTGTA ATGGATAGGGATCTCAAATTACATAAAAGCATTGACTGCTTTTTCAGTGGGACTACAGCG GTGGCAGTGATCAAGCAGGAACACAATCTTATAATTGGCAATTTGGGGGATTCAAGAGCT GTCTTAGGCACCAGAGATGAAAATAACCAGCTTATTGCTGTTCAATTGACAGTTGATCTC AAACCTAACATTCCAAGCGAAGCACAGAGAATCAGGCAACGCAGGGGCAGAATATTCGCG CTTCCCGAGGAGCCGGAGGTTGCTCGTGTTTGGCTTCCAAAGTACAACTCTCCTGGACTG GCCATGGCTAGGGCATTTGGAGACTTCTGTCTGAAGGACCATGGTGTAATTTCTACGCCT GACGTCTCCTATCACCACATCACGGAGAAAGACGAATTTGTGGTGCTGGCTACTGACGGG GTCTGGGACGTGCTATCAAACGATGAGGTTGTTAGCACTGTCTGCCGAGCCACATCTCAG GCCTCTGCAGCCCGGTTTCTCGTCGAGTCGGCTCACCGCGCTTGGCGGACTCGGTTCCCC ACTTCTAAGATCGATGACTGCGCTGTTGTCTGCCTGTTCCTGAACACAGACAAAGCGAGC GAATCGTCGAGTTCTTTGGCCAAGAACTTGGCAGATGCTGTAGAAGCTAGCAGTGCTGGG CGCGCCACAACTGTCCAGGTGAGCGCTGGTGCATCTACAGATGTTGCCGCCCTGGTACCA GTACCAGATGGGAACGAGGTGTCTATTGCTGAAACCATCACAAAGCTGGTCACGCTCATG GATTTGCCCAAGGATGGTTGA

Peptide Sequence

PEP ID	Zm00001d016474_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:163737281:163742365:-1 gene:Zm00001d016474 transcript:Zm00001d016474_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 74
Sequence	MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVT DAGAAGGGGRCMEDFFDCLLGLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRF AAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWENFCSRDDTIFCGVFDGHGPY GHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRA VLGTRDENNQLIAVQLTVDLKPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGL AMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDGVWDVLSNDEVVSTVCRATSQ ASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

Transcript Sequence

Transcript ID	Zm00001d016474_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:163737281:163742365:-1 gene:Zm00001d016474 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 74
Sequence	ATCCCCGCTGAATCAGCAGCAGCAACTCTCTCCCTCTCCGTTCTTGGTGGTCCGAGACCC TTGGCCGTACGCTCTGCCTCACTCCTCCGTCTCTTGCTTCCCTTGCCGCCGGCGGCGCGC GGCGCCGGGCGCGGATCGGCGGCGGGTGCATGGTGGAGGCCGCCGCCGGGCGCCGGACAG GCACCAGCCGTCGGCGGCCTAGCGGCAGCGGAGGGGAGCACCGGCACCTGGTCGCGCTCG CCGTCGCCGCGCGCGTCGCCATGGTCACCACCCGGTCCGTGGGTCCAGCAGCAGTAGCGG AAGGTGATGGAGCGGGAGCTGCTGTAACAGATGCCGGCGCCGCTGGCGGTGGCGGACGAT GCATGGAGGACTTCTTCGACTGCCTCCTCGGCTTGCTCGGCGCGTTAGGCATGACATGGG CTGCGGCGCGGCCCCAGCGGCAGCCGCGCCCGCCGCTGCCTCGCGGGGCTGCGGGGGCGG GGCCTGCGCCAACTGACTCCCGGCGTTTCGCGGCGGAGCTCAGGGCCACCCCCGGCCGGA TCGCCGGCAATGGCGCCTGCGCCGTCGCGTCACTGTACACGCTGCAGGGCAAGAAGGGCG TCAACCAGGATGCTATGATCTTCTGGGAGAACTTCTGTTCAAGAGATGATACCATCTTTT GTGGTGTGTTTGACGGCCATGGACCTTATGGCCATTTGGTTGCCAAGAGAGTAAGAGATC TGCTGCCTCTAAAGTTAGGAGAAGGTTTGACGACGGAAGATGGTAGAGTAACATCCACTG GCAACATTAAGCTCAACACACATGATGTAGCTTCACCAGAACACATAGACAAAGGAAGTA CTGCCATTTCCTCTGAAGCTCAGCAGAATGGAGAGTATCCAGAGACCTTCCCAGCATTGA GAACTTCATTCTTGAAGGCATTCCGTGTAATGGATAGGGATCTCAAATTACATAAAAGCA TTGACTGCTTTTTCAGTGGGACTACAGCGGTGGCAGTGATCAAGCAGGAACACAATCTTA TAATTGGCAATTTGGGGGATTCAAGAGCTGTCTTAGGCACCAGAGATGAAAATAACCAGC TTATTGCTGTTCAATTGACAGTTGATCTCAAACCTAACATTCCAAGCGAAGCACAGAGAA TCAGGCAACGCAGGGGCAGAATATTCGCGCTTCCCGAGGAGCCGGAGGTTGCTCGTGTTT GGCTTCCAAAGTACAACTCTCCTGGACTGGCCATGGCTAGGGCATTTGGAGACTTCTGTC TGAAGGACCATGGTGTAATTTCTACGCCTGACGTCTCCTATCACCACATCACGGAGAAAG ACGAATTTGTGGTGCTGGCTACTGACGGGGTCTGGGACGTGCTATCAAACGATGAGGTTG TTAGCACTGTCTGCCGAGCCACATCTCAGGCCTCTGCAGCCCGGTTTCTCGTCGAGTCGG CTCACCGCGCTTGGCGGACTCGGTTCCCCACTTCTAAGATCGATGACTGCGCTGTTGTCT GCCTGTTCCTGAACACAGACAAAGCGAGCGAATCGTCGAGTTCTTTGGCCAAGAACTTGG CAGATGCTGTAGAAGCTAGCAGTGCTGGGCGCGCCACAACTGTCCAGGTGAGCGCTGGTG CATCTACAGATGTTGCCGCCCTGGTACCAGTACCAGATGGGAACGAGGTGTCTATTGCTG AAACCATCACAAAGCTGGTCACGCTCATGGATTTGCCCAAGGATGGTTGAGGCTCCTGTG ATTGGGACCTGAACGAAGATATACCACATCGGTGGGTTTCTGCTTGCAGTTTTTTTTCCT GAACGCAAGTGTGGCTAGAATTTGCAGTTTTGCTTCGTGTAAAGTACCGCGTCAGTTTAG CGTGATTTGTTCCAGTTTTTGTAATATTTCAATTCATGTTAGTATTGATGCGTCCGTGCG TCGTCGAGATCGTAGTATTCTGTAGGAAGGAGGCTACTGAGTTTTTGTGCTTCCTGTAAA TATATTCATCATTCTATCTCTGGTGTCTGATCTATATCATCATTGCTTTGGGGGTCGGTC TTATTAATATAAATAAGGATTATATAATC