Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016471_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:163692385:163693980:1 gene:Zm00001d016471 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trans-cinnamate 4-monooxygenase
Sequence	ATGGCGGTGTCCGCGGCCAAGATGGCCGTCGCCACGGCCGTCTCCTTAGCCGTGCACTGG CTCCTCCGGTCCTTCCTCCAGGCGCAGCACCCTGCGCTGGGCCTGCTCCTCCCGACCGTC GTCTTCATCGGCATTGCCGCGTCTGGCAATGCCGCAGGCGCTGCCAACGACGCGCCGCCG GGGCCGCCGGCCGTGCCGGTGTTCGGCAACTGGCTGCAGGTGGGCAACGACCTGAACCAC CGGTTCCTGGCGCGCCTGTCCGCGCGGTACGGGCCCGTCTTTCGCCTCCGCCTCGGCGTG CGCAACCTGGTGGTCGTCTCCGACCCGCGCCTCGCCACGGAGGTGCTGCACACGCAGGGG GTGGAGTTCGGCTCCCGCCCCCGCAACGTCGTCTTCGACATCTTCACCGCCAACGGCGCC GACATGGTGTTCACCGAGTACGGCGACCACTGGCGCCGCATGCGCCGCGTCATGACGCTG CCCTTCTTCACCGCGCGCGTCGTGCAGCAGTACAGGGGCATGTGGGAGGCCGAGATGGAC GCCGCCGTCTCCGACGTCGCCTCCGCGGCCCAGCGCGCCGCCGGCCTCGTCGTGCGGCGC AGGCTGCAGCTCATGCTCTACAACATCATGTACGGGATGATGTTCGACGCGCGCTTCGGC TCCGTCGACGACCCCATGTTCGTGGAGGCCACCAGGTTCAACTCCGAGCGAAGCCGCCTC GCGCAGAGCTTCGACTACAACTACGGCGACTTCATCCCCGTCCTGCGCCCATTCCTGCGC GGCTACCTCGCCAGGTGCAAGGACCTGCAGGCCAGGCGGCTCGCCTTCTTCAACAGCAAC TACGTCGAGAAGAGGAGGAAGGTCATGGACGCGCCGGGGGACAAGGGCAAGCTCAGGTGC GCCATCGACCACGTCCTCCAGGCGGAGAAGAGCGGCGAGATCACCCCGGAGAACGTCATC TACATCGTCGAGAACATCAACGTCGCCGCCATCGAGACCACGCTCTGGTCCATCGAGTGG GCGCTCGCGGAGGTCGTCAACCACCCGGCGGTGCAGCGCAAGGTCCGCGACGAGATCAAG GCCGTCGTCGCCGACCACGAGCCCATCACGGAGTCCACCATCCACCGCCTCCCCTACCTG CAGGCCGTCATCAAGGAGACGCTGCGCCTCCACTCCCCGATCCCGCTCCTCGTCCCGCAC ATGAACCTCGAGGAGGCCAAGCTCGGCGGCTACACCATCCCCAAGGGCTCCAAGGTGGTG GTCAACGCGTGGTGGCTGGCCAACAATCCGGAGCTGTGGGACAAGCCCGAGGAGTTCCGG CCGGAGCGGTTCCTAGGCGAGGAGAAGAGCGTGGACGCCACCGTTGGCGGGAAGGTGGAC TTCCGCTTCCTGCCGTTCGGCGTGGGCCGCCGCAGCTGCCCCGGGATCATCCTCGCGCTG CCCATCCTCGCGCTCATCGTCGGCAAGCTCGTGCGCAGCTTCGAGATGGTACCACCGCCC GGCGTGGAGAAGCTCGACGTCAGCGAGAAAGGAGGACAGTTCAGCCTGCACATTGCCAAC CACTCCGTCATCGCCTTCCACCCCGTCTCTGCATGA

Peptide Sequence

PEP ID	Zm00001d016471_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:163692385:163693980:1 gene:Zm00001d016471 transcript:Zm00001d016471_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trans-cinnamate 4-monooxygenase
Sequence	MAVSAAKMAVATAVSLAVHWLLRSFLQAQHPALGLLLPTVVFIGIAASGNAAGAANDAPP GPPAVPVFGNWLQVGNDLNHRFLARLSARYGPVFRLRLGVRNLVVVSDPRLATEVLHTQG VEFGSRPRNVVFDIFTANGADMVFTEYGDHWRRMRRVMTLPFFTARVVQQYRGMWEAEMD AAVSDVASAAQRAAGLVVRRRLQLMLYNIMYGMMFDARFGSVDDPMFVEATRFNSERSRL AQSFDYNYGDFIPVLRPFLRGYLARCKDLQARRLAFFNSNYVEKRRKVMDAPGDKGKLRC AIDHVLQAEKSGEITPENVIYIVENINVAAIETTLWSIEWALAEVVNHPAVQRKVRDEIK AVVADHEPITESTIHRLPYLQAVIKETLRLHSPIPLLVPHMNLEEAKLGGYTIPKGSKVV VNAWWLANNPELWDKPEEFRPERFLGEEKSVDATVGGKVDFRFLPFGVGRRSCPGIILAL PILALIVGKLVRSFEMVPPPGVEKLDVSEKGGQFSLHIANHSVIAFHPVSA

Transcript Sequence

Transcript ID	Zm00001d016471_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:163692385:163693980:1 gene:Zm00001d016471 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trans-cinnamate 4-monooxygenase
Sequence	ATGGCGGTGTCCGCGGCCAAGATGGCCGTCGCCACGGCCGTCTCCTTAGCCGTGCACTGG CTCCTCCGGTCCTTCCTCCAGGCGCAGCACCCTGCGCTGGGCCTGCTCCTCCCGACCGTC GTCTTCATCGGCATTGCCGCGTCTGGCAATGCCGCAGGCGCTGCCAACGACGCGCCGCCG GGGCCGCCGGCCGTGCCGGTGTTCGGCAACTGGCTGCAGGTGGGCAACGACCTGAACCAC CGGTTCCTGGCGCGCCTGTCCGCGCGGTACGGGCCCGTCTTTCGCCTCCGCCTCGGCGTG CGCAACCTGGTGGTCGTCTCCGACCCGCGCCTCGCCACGGAGGTGCTGCACACGCAGGGG GTGGAGTTCGGCTCCCGCCCCCGCAACGTCGTCTTCGACATCTTCACCGCCAACGGCGCC GACATGGTGTTCACCGAGTACGGCGACCACTGGCGCCGCATGCGCCGCGTCATGACGCTG CCCTTCTTCACCGCGCGCGTCGTGCAGCAGTACAGGGGCATGTGGGAGGCCGAGATGGAC GCCGCCGTCTCCGACGTCGCCTCCGCGGCCCAGCGCGCCGCCGGCCTCGTCGTGCGGCGC AGGCTGCAGCTCATGCTCTACAACATCATGTACGGGATGATGTTCGACGCGCGCTTCGGC TCCGTCGACGACCCCATGTTCGTGGAGGCCACCAGGTTCAACTCCGAGCGAAGCCGCCTC GCGCAGAGCTTCGACTACAACTACGGCGACTTCATCCCCGTCCTGCGCCCATTCCTGCGC GGCTACCTCGCCAGGTGCAAGGACCTGCAGGCCAGGCGGCTCGCCTTCTTCAACAGCAAC TACGTCGAGAAGAGGAGGAAGGTCATGGACGCGCCGGGGGACAAGGGCAAGCTCAGGTGC GCCATCGACCACGTCCTCCAGGCGGAGAAGAGCGGCGAGATCACCCCGGAGAACGTCATC TACATCGTCGAGAACATCAACGTCGCCGCCATCGAGACCACGCTCTGGTCCATCGAGTGG GCGCTCGCGGAGGTCGTCAACCACCCGGCGGTGCAGCGCAAGGTCCGCGACGAGATCAAG GCCGTCGTCGCCGACCACGAGCCCATCACGGAGTCCACCATCCACCGCCTCCCCTACCTG CAGGCCGTCATCAAGGAGACGCTGCGCCTCCACTCCCCGATCCCGCTCCTCGTCCCGCAC ATGAACCTCGAGGAGGCCAAGCTCGGCGGCTACACCATCCCCAAGGGCTCCAAGGTGGTG GTCAACGCGTGGTGGCTGGCCAACAATCCGGAGCTGTGGGACAAGCCCGAGGAGTTCCGG CCGGAGCGGTTCCTAGGCGAGGAGAAGAGCGTGGACGCCACCGTTGGCGGGAAGGTGGAC TTCCGCTTCCTGCCGTTCGGCGTGGGCCGCCGCAGCTGCCCCGGGATCATCCTCGCGCTG CCCATCCTCGCGCTCATCGTCGGCAAGCTCGTGCGCAGCTTCGAGATGGTACCACCGCCC GGCGTGGAGAAGCTCGACGTCAGCGAGAAAGGAGGACAGTTCAGCCTGCACATTGCCAAC CACTCCGTCATCGCCTTCCACCCCGTCTCTGCATGA